keyword
https://read.qxmd.com/read/37888215/genetic-and-molecular-evidence-of-a-tetrapolar-mating-system-in-the-edible-mushroom-grifola-frondosa
#41
JOURNAL ARTICLE
Shuang-Shuang Zhang, Xiao Li, Guo-Jie Li, Qi Huang, Jing-Hua Tian, Jun-Ling Wang, Ming Li, Shou-Mian Li
Grifola frondosa is a valuable edible fungus with high nutritional and medicinal values. The mating systems of fungi not only offer practical strategies for breeding, but also have far-reaching effects on genetic variability. Grifola frondosa has been considered as a sexual species with a tetrapolar mating system based on little experimental data. In the present study, one group of test crosses and six groups of three-round mating experiments from two parental strains were conducted to determine the mating system in G...
September 23, 2023: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/37863906/graphene-oxide-immobilized-2-morpholinoethanamine-as-a-versatile-acid-base-catalyst-for-synthesis-of-some-heterocyclic-compounds-and-molecular-docking-study
#42
JOURNAL ARTICLE
Leila Amiri-Zirtol, Tahereh Solymani Ahooie, Elham Riazimontazer, Mohammad Ali Amrollahi, Bibi-Fatemeh Mirjalili
In this study, a new heterogeneous catalyst was synthesized based on graphene oxide (GO) as a natural material. On the surface of nanosheet graphene oxide, 2-Morpholinoethanamine was immobilized using a non-toxic, green, and simple method. This resulted in the preparation of a bifunctional acid-base nanocatalyst. The synthesized composite was fully characterized using various methods, including Fourier transform infrared spectrometry (FT-IR), scanning electron microscopy (FESEM), energy dispersive X-ray spectroscopy (EDS), mapping, Raman spectroscopy, X-ray diffractometry (XRD), thermogravimetric analysis (TGA), and CHN elemental analysis...
October 20, 2023: Scientific Reports
https://read.qxmd.com/read/37833444/psoriasis-severity-classification-based-on-adaptive-multi-scale-features-for-multi-severity-disease
#43
JOURNAL ARTICLE
Cho-I Moon, Jiwon Lee, Yoo Sang Baek, Onesok Lee
Psoriasis is a skin disease that causes lesions of various sizes across the body and can persist for years with cyclic deterioration and improvement. During treatment, and a multiple-severity disease, with irregular severity within the observation area may be found. The current psoriasis evaluation is based on the subjective evaluation criteria of the clinician using the psoriasis area and severity index (PASI). We proposed a novel psoriasis evaluation method that detects representative regions as evaluation criteria, and extracts severity features to improve the evaluation performance of various types of psoriasis, including multiple-severity diseases...
October 13, 2023: Scientific Reports
https://read.qxmd.com/read/37819022/non-contrast-based-approach-for-liver-function-quantification-using-bayesian-based-intravoxel-incoherent-motion-diffusion-weighted-imaging-a-pilot-study
#44
JOURNAL ARTICLE
Monchai Phonlakrai, Saadallah Ramadan, John Simpson, Kate Skehan, Jonathan Goodwin, Yuvnik Trada, Jarad Martin, Swetha Sridharan, Lay Theng Gan, Sabbir Hossain Siddique, Peter Greer
PURPOSE: Liver cirrhosis disrupts liver function and tissue perfusion, detectable by magnetic resonance imaging (MRI). Assessing liver function at the voxel level with 13-b value intravoxel incoherent motion diffusion-weighted imaging (IVIM-DWI) could aid in radiation therapy liver-sparing treatment for patients with early impairment. This study aimed to evaluate the feasibility of IVIM-DWI for liver function assessment and correlate it with other multiparametric (mp) MRI methods at the voxel level...
October 11, 2023: Journal of Applied Clinical Medical Physics
https://read.qxmd.com/read/37814487/creatine-mapping-of-the-brain-at-3t-by-cest-mri
#45
JOURNAL ARTICLE
Kexin Wang, Jianpan Huang, Licheng Ju, Su Xu, Rao P Gullapalli, Yajie Liang, Joshua Rogers, Yuguo Li, Peter C M van Zijl, Robert G Weiss, Kannie W Y Chan, Jiadi Xu
PURPOSE: To assess the feasibility of CEST-based creatine (Cr) mapping in brain at 3T using the guanidino (Guan) proton resonance. METHODS: Wild type and knockout mice with guanidinoacetate N-methyltransferase deficiency and low Cr and phosphocreatine (PCr) concentrations in the brain were used to assign the Cr and protein-based arginine contributions to the GuanCEST signal at 2.0 ppm. To quantify the Cr proton exchange rate, two-step Bloch-McConnell fitting was used to fit the extracted CrCEST line-shape and multi-B1 Z-spectral data...
October 9, 2023: Magnetic Resonance in Medicine
https://read.qxmd.com/read/37808841/nucleotide-excision-repair-of-aflatoxin-induced-dna-damage-within-the-3d-human-genome-organization
#46
Yiran Wu, Muhammad Muzammal Adeel, Aziz Sancar, Wentao Li
UNLABELLED: Aflatoxin B1 (AFB1), a potent mycotoxin, is one of the two primary risk factors that cause liver cancer. In the liver, the bioactivated AFB1 intercalates into the DNA double helix to form a bulky DNA adduct which will lead to mutation if left unrepaired. We have adapted the tXR-seq method to measure the nucleotide excision repair of AFB1-induced DNA adducts. We have found that transcription-coupled repair plays a major role in the damage removal process and the released excision products have a distinctive length distribution pattern...
September 29, 2023: bioRxiv
https://read.qxmd.com/read/37794847/head-and-neck-multichannel-b1-mapping-and-rf-shimming-of-the-carotid-arteries-using-a-7t-parallel-transmit-head-coil
#47
JOURNAL ARTICLE
Matthijs H S de Buck, James L Kent, Peter Jezzard, Aaron T Hess
PURPOSE: Neurovascular MRI suffers from a rapid drop in B1 + into the neck when using transmit head coils at 7 T. One solution to improving B1 + magnitude in the major feeding arteries in the neck is to use custom RF shims on parallel-transmit head coils. However, calculating such shims requires robust multichannel B1 + maps in both the head and the neck, which is challenging due to low RF penetration into the neck, limited dynamic range of multichannel B1 + mapping techniques, and B0 sensitivity...
October 5, 2023: Magnetic Resonance in Medicine
https://read.qxmd.com/read/37779186/activation-of-multiple-eph-receptors-on-neuronal-membranes-correlates-with-the-onset-of-optic-neuropathy
#48
JOURNAL ARTICLE
Thomas A Strong, Juan Esquivel, Qikai Wang, Paul J Ledon, Hua Wang, Gabriel Gaidosh, David Tse, Daniel Pelaez
BACKGROUND: Optic neuropathy is a major cause of irreversible blindness, yet the molecular determinants that contribute to neuronal demise have not been fully elucidated. Several studies have identified 'ephrin signaling' as one of the most dysregulated pathways in the early pathophysiology of optic neuropathy with varied etiologies. Developmentally, gradients in ephrin signaling coordinate retinotopic mapping via repulsive modulation of cytoskeletal dynamics in neuronal membranes. Little is known about the role ephrin signaling plays in the post-natal visual system and its correlation with the onset of optic neuropathy...
October 2, 2023: Eye and Vision (London, England)
https://read.qxmd.com/read/37749847/simultaneous-perfusion-diffusion-t-2-and-t-1-mapping-with-mr-fingerprinting
#49
JOURNAL ARTICLE
Hongli Fan, Lisa Bunker, Zihan Wang, Alexandra Zezinka Durfee, Doris Lin, Vivek Yedavalli, Yulin Ge, Xiaohong Joe Zhou, Argye E Hillis, Hanzhang Lu
PURPOSE: Quantitative mapping of brain perfusion, diffusion, T2 *, and T1 has important applications in cerebrovascular diseases. At present, these sequences are performed separately. This study aims to develop a novel MRI technique to simultaneously estimate these parameters. METHODS: This sequence to measure perfusion, diffusion, T2 *, and T1 mapping with magnetic resonance fingerprinting (MRF) was based on a previously reported MRF-arterial spin labeling (ASL) sequence, but the acquisition module was modified to include different TEs and presence/absence of bipolar diffusion-weighting gradients...
September 25, 2023: Magnetic Resonance in Medicine
https://read.qxmd.com/read/37714527/fast-high-resolution-electric-properties-tomography-using-three-dimensional-quantitative-transient-state-imaging-based-water-fraction-estimation
#50
JOURNAL ARTICLE
Matteo Cencini, Marta Lancione, Rosa Pasquariello, Luca Peretti, Carolin M Pirkl, Rolf F Schulte, Guido Buonincontri, Alessandro Arduino, Luca Zilberti, Laura Biagi, Michela Tosetti
In this study, we aimed to develop a fast and robust high-resolution technique for clinically feasible electrical properties tomography based on water content maps (wEPT) using Quantitative Transient-state Imaging (QTI), a multiparametric transient state-based method that is similar to MR fingerprinting. Compared with the original wEPT implementation based on standard spin-echo acquisition, QTI provides robust electrical properties quantification towards B1 + inhomogeneities and full quantitative relaxometry data...
September 15, 2023: NMR in Biomedicine
https://read.qxmd.com/read/37705496/time-efficient-high-resolution-3t-whole-brain-relaxometry-using-3d-qalas-with-wave-caipi-readouts
#51
JOURNAL ARTICLE
Jaejin Cho, Borjan Gagoski, Tae Hyung Kim, Fuyixue Wang, Mary Kate Manhard, Douglas Dean, Steven Kecskemeti, Arvind Caprihan, Wei-Ching Lo, Daniel Nico Splitthoff, Wei Liu, Daniel Polak, Stephen Cauley, Kawin Setsompop, Patricia Ellen Grant, Berkin Bilgic
PURPOSE: Volumetric, high-resolution, quantitative mapping of brain-tissue relaxation properties is hindered by long acquisition times and SNR challenges. This study combines time-efficient wave-controlled aliasing in parallel imaging (wave-CAIPI) readouts with the 3D quantification using an interleaved Look-Locker acquisition sequence with a T2 preparation pulse (3D-QALAS), enabling full-brain quantitative T1 , T2 , and proton density (PD) maps at 1.15-mm3 isotropic voxels in 3 min...
September 14, 2023: Magnetic Resonance in Medicine
https://read.qxmd.com/read/37684712/in-vivo-lymph-node-cest-dixon-mri-in-breast-cancer-patients-with-metastatic-lymph-node-involvement
#52
JOURNAL ARTICLE
Manus J Donahue, Paula M C Donahue, R Sky Jones, Maria Garza, Chelsea Lee, Niral J Patel, Andrea Cooper, Jill B De Vis, Ingrid Meszoely, Rachelle Crescenzi
PURPOSE: Axillary lymph nodes (LNs) often present a reservoir for metastatic breast cancer, yet metastatic LN involvement cannot be discerned definitively using diagnostic imaging. This study investigated whether in vivo CEST may discriminate LNs with versus without metastatic involvement. METHODS: 3T MRI was performed in patients with breast cancer before clinically-indicated mastectomy or lumpectomy with LN removal, after which LN metastasic involvement was determined using histological evaluation...
September 8, 2023: Magnetic Resonance in Medicine
https://read.qxmd.com/read/37665644/the-interaction-network-of-the-proteasome-assembly-chaperone-psmd9-regulates-proteostasis
#53
JOURNAL ARTICLE
Joel Christie, C Merlyn Anthony, Mahalakshmi Harish, Deepti Mudartha, Sheikh Burhan Ud Din Farooqee, Prasanna Venkatraman
Functional networks in cells are created by physical, genetic and regulatory interactions. Mapping them and annotating their functions by available methods remains a challenge. We use affinity purification mass spectrometry (AP-MS) coupled with SLiMFinder to discern such a network involving 26S proteasome non-ATPase regulatory subunit 9 (PSMD9), a chaperone of proteasome assembly. Approximately 20% of proteins within the PSMD9 interactome carry a short linear motif (SLiM) of the type 'EXKK'. The binding of purified PSMD9 with the peptide sequence ERKK, proteins heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNPA2B1; containing ERKK) and peroxiredoxin-6 (PRDX6; containing EAKK) provided proof of principle for this motif-driven network...
September 4, 2023: FEBS Journal
https://read.qxmd.com/read/37649000/genome-wide-study-of-cerrena-unicolor-87613-laccase-gene-family-and-their-mode-prediction-in-association-with-substrate-oxidation
#54
JOURNAL ARTICLE
Long-Bin Zhang, Wu-Wei-Jie Yang, Ting-Ting Qiu
BACKGROUND: Laccases are green biocatalysts with wide industrial applications. The study of efficient and specific laccase producers remains a priority. Cerrena species have been shown to be promising basidiomycete candidates for laccase production. Although two sets of Cerrena genome data have been publicly published, no comprehensive bioinformatics study of laccase gene family in C. unicolor has been reported, particularly concerning the analysis of their three-dimensional (3D) structures and molecular docking to substrates, like ABTS and aflatoxin B1 (AFB1 )...
August 30, 2023: BMC Genomics
https://read.qxmd.com/read/37619408/mapping-the-dynamic-high-density-lipoprotein-synapse
#55
JOURNAL ARTICLE
Kathrin Frey, Lucia Rohrer, Fabian Frommelt, Meret Ringwald, Anton Potapenko, Sandra Goetze, Arnold von Eckardstein, Bernd Wollscheid
BACKGROUND AND AIMS: Heterogeneous high-density lipoprotein (HDL) particles, which can contain hundreds of proteins, affect human health and disease through dynamic molecular interactions with cell surface proteins. How HDL mediates its long-range signaling functions and interactions with various cell types is largely unknown. Due to the complexity of HDL, we hypothesize that multiple receptors engage with HDL particles resulting in condition-dependent receptor-HDL interaction clusters at the cell surface...
July 31, 2023: Atherosclerosis
https://read.qxmd.com/read/37607507/synthetic-inversion-image-generation-using-mp2rage-t1-mapping-for-surgical-targeting-in-deep-brain-stimulation-and-lesioning
#56
Erik H Middlebrooks, Shengzhen Tao, Xiangzhi Zhou, Elena Greco, Erin M Westerhold, Philip W Tipton, Alfredo Quinones-Hinojosa, Sanjeet S Grewal, Vishal Patel
BACKGROUND: Advances in MRI technology have increased interest in direct targeting for deep brain stimulation (DBS). Various imaging sequences have been shown to provide increased contrast of numerous common DBS targets, such as T1-weighted, Fast Gray Matter Acquisition T1 Inversion Recovery (FGATIR), gray matter nulled, and Edge-Enhancing Gradient Echo (EDGE); however, the continual increase in the number of necessary sequences has led to an increase in imaging time, which is undesirable...
August 22, 2023: Stereotactic and Functional Neurosurgery
https://read.qxmd.com/read/37591421/loss-of-adp-glucose-transporter-in-barley-sex1-mutant-caused-shrunken-endosperm-but-with-elevated-protein-and-%C3%AE-glucan-content-in-whole-meal
#57
JOURNAL ARTICLE
Hang Liu, Yaya Zou, Qijing Xuan, Rong Tian, Jing Zhu, Xiangru Qu, Min Sun, Yanlin Liu, Huaping Tang, Mei Deng, Qiantao Jiang, Qiang Xu, Yuanying Peng, Guoyue Chen, Wei Li, Zhien Pu, Yunfeng Jiang, Jirui Wang, Pengfi Qi, Yazhou Zhang, Youliang Zheng, Yuming Wei, Jian Ma
Grain shape and plumpness affect barley yield. Despite numerous studies on shrunken endosperm mutants in barley, their molecular mechanism and application potential in the food industry are largely unknown. Here, map-based cloning, co-segregation analyses, and allelic variant validation revealed that the loss of HORVU6Hr1G037950 encoding an ADP-glucose transporter caused the shrunken endosperm in sex1. Haplotype analysis suggested that hap4 in the promoter sequence was positively related to the hundred-grain weight showing a breeding potential...
August 15, 2023: International Journal of Biological Macromolecules
https://read.qxmd.com/read/37583935/using-the-theoretical-domains-framework-to-determine-the-barriers-and-facilitators-to-medication-adherence-in-parkinson-s-disease
#58
JOURNAL ARTICLE
J C Smith, C H Seage, E Lane, D H James
BACKGROUND: Patient medication adherence in Parkinson's Disease (PD) is often suboptimal. This may lead to poor symptom management, greater disease burden, decreased quality of life and increased healthcare costs. Use of psychological theory such as the Theoretical Domains Framework (TDF) has effectively captured barriers and facilitators to medication adherence in other long-term conditions. Applying this framework to medication adherence in PD could provide a better understanding of the challenges to inform the development of effective interventions...
September 2023: Explor Res Clin Soc Pharm
https://read.qxmd.com/read/37582198/alternating-look-locker-for-quantitative-t-1-t-1%C3%AF-and-b-1-3d-mri-mapping
#59
JOURNAL ARTICLE
Lin Wu, Chris Carchi, Shalom Michaeli, Silvia Mangia, Djaudat Idiyatullin
PURPOSE: To develop a new MRI method, entitled alternating Look-Locker (aLL), for quantitative <mml:math xmlns:mml="https://www.w3.org/1998/Math/MathML"> <mml:semantics> <mml:mrow><mml:msub><mml:mi>T</mml:mi> <mml:mn>1</mml:mn></mml:msub> </mml:mrow> <mml:annotation>$$ {T}_1 $$</mml:annotation></mml:semantics> </mml:math> , <mml:math xmlns:mml="https://www.w3.org/1998/Math/MathML"> <mml:semantics> <mml:mrow><mml:msub><mml:mi>T</mml:mi> <mml:mrow><mml:mn>1</mml:mn> <mml:mi>ρ</mml:mi></mml:mrow> </mml:msub> </mml:mrow> <mml:annotation>$$ {T}_{1\uprho} $$</mml:annotation></mml:semantics> </mml:math> , and <mml:math xmlns:mml="https://www...
August 15, 2023: Magnetic Resonance in Medicine
https://read.qxmd.com/read/37566311/a-new-method-to-improve-rf-safety-of-implantable-medical-devices-using-inductive-coupling-at-3-0%C3%A2-t-mri
#60
JOURNAL ARTICLE
Bu S Park, Joshua W Guag, Hongbae Jeong, Sunder S Rajan, Brent McCright
OBJECTIVE: To enhance RF safety when implantable medical devices are located within the body coil but outside the imaging region by using a secondary resonator (SR) to reduce electric fields, the corresponding specific absorption rate (SAR), and temperature change during MRI. MATERIALS AND METHODS: This study was conducted using numerical simulations with an American Society for Testing and Materials (ASTM) phantom and adult human models of Ella and Duke from Virtual Family Models, along with corresponding experimental results of temperature change obtained using the ASTM phantom...
August 11, 2023: Magma
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