keyword
https://read.qxmd.com/read/38687678/loss-of-tumor-suppressor-tmem127-drives-ret-mediated-transformation-through-disrupted-membrane-dynamics
#1
JOURNAL ARTICLE
Timothy J Walker, Eduardo Reyes-Alvarez, Brandy D Hyndman, Michael G Sugiyama, Larissa C B Oliveira, Aisha N Rekab, Mathieu J F Crupi, Rebecca Cabral-Dias, Qianjin Guo, Patricia L M Dahia, Douglas S Richardson, Costin N Antonescu, Lois M Mulligan
Internalization from the cell membrane and endosomal trafficking of receptor tyrosine kinases (RTKs) are important regulators of signaling in normal cells that can frequently be disrupted in cancer. The adrenal tumor pheochromocytoma (PCC) can be caused by activating mutations of the rearranged during transfection (RET) receptor tyrosine kinase, or inactivation of TMEM127, a transmembrane tumor suppressor implicated in trafficking of endosomal cargos. However, the role of aberrant receptor trafficking in PCC is not well understood...
April 30, 2024: ELife
https://read.qxmd.com/read/38677987/-microglia-differential-genes-and-their-functions-in-paraquat-induced-parkinson-s-disease-like-in-mice-s-brains-based-on-single-cell-rna-sequencing
#2
JOURNAL ARTICLE
Z K Guo, Y T Zhang, Y Zhang, Y L Weng, H Y Li, S Y Wu
Objective: To analyze the differential genes and related signaling pathways of microglia subpopulations in Parkinson's disease (PD) -like mouse brains induced by paraquat (PQ) based on single-cell RNA sequencing, and provide clues to elucidate the mechanism of PQ-induced PD-like changes in the brain of animals. Methods: In September 2021, six male 6-week-old C57BL/6 mice were randomly divided into control group and experimental group (three mice in each group) . The mice were injected with saline, 10.0 mg/kg PQ intraperitoneally, once every three days, and 10 consecutive injections were used for modeling...
April 20, 2024: Chinese Journal of Industrial Hygiene and Occupational Diseases
https://read.qxmd.com/read/38668607/overview-of-bacterial-protein-toxins-from-pathogenic-bacteria-mode-of-action-and-insights-into-evolution
#3
REVIEW
Michel R Popoff
Bacterial protein toxins are secreted by certain bacteria and are responsible for mild to severe diseases in humans and animals. They are among the most potent molecules known, which are active at very low concentrations. Bacterial protein toxins exhibit a wide diversity based on size, structure, and mode of action. Upon recognition of a cell surface receptor (protein, glycoprotein, and glycolipid), they are active either at the cell surface (signal transduction, membrane damage by pore formation, or hydrolysis of membrane compound(s)) or intracellularly...
April 8, 2024: Toxins
https://read.qxmd.com/read/38664376/numb-positively-regulates-hedgehog-signaling-at-the-ciliary-pocket
#4
JOURNAL ARTICLE
Xiaoliang Liu, Patricia T Yam, Sabrina Schlienger, Eva Cai, Jingyi Zhang, Wei-Ju Chen, Oscar Torres Gutierrez, Vanesa Jimenez Amilburu, Vasanth Ramamurthy, Alice Y Ting, Tess C Branon, Michel Cayouette, Risako Gen, Tessa Marks, Jennifer H Kong, Frédéric Charron, Xuecai Ge
Hedgehog (Hh) signaling relies on the primary cilium, a cell surface organelle that serves as a signaling hub for the cell. Using proximity labeling and quantitative proteomics, we identify Numb as a ciliary protein that positively regulates Hh signaling. Numb localizes to the ciliary pocket and acts as an endocytic adaptor to incorporate Ptch1 into clathrin-coated vesicles, thereby promoting Ptch1 exit from the cilium, a key step in Hh signaling activation. Numb loss impedes Sonic hedgehog (Shh)-induced Ptch1 exit from the cilium, resulting in reduced Hh signaling...
April 25, 2024: Nature Communications
https://read.qxmd.com/read/38653877/regulation-of-notch-signaling-by-non-muscle-myosin-ii-zipper-in-drosophila
#5
JOURNAL ARTICLE
Dipti Verma, Ankita Singh, Jyoti Singh, Mousumi Mutsuddi, Ashim Mukherjee
The Notch pathway is an evolutionarily conserved signaling system that is intricately regulated at multiple levels and it influences different aspects of development. In an effort to identify novel components involved in Notch signaling and its regulation, we carried out protein interaction screens which identified non-muscle myosin II Zipper (Zip) as an interacting partner of Notch. Physical interaction between Notch and Zip was further validated by co-immunoprecipitation studies. Immunocytochemical analyses revealed that Notch and Zip co-localize within same cytoplasmic compartment...
April 24, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38652315/flotillins-affect-lps-induced-tlr4-signaling-by-modulating-the-trafficking-and-abundance-of-cd14
#6
JOURNAL ARTICLE
Orest V Matveichuk, Anna Ciesielska, Aneta Hromada-Judycka, Natalia Nowak, Ichrak Ben Amore, Gabriela Traczyk, Katarzyna Kwiatkowska
Lipopolysaccharide (LPS) induces a strong pro-inflammatory reaction of macrophages upon activation of Toll-like receptor 4 (TLR4) with the assistance of CD14 protein. Considering a key role of plasma membrane rafts in CD14 and TLR4 activity and the significant impact exerted on that activity by endocytosis and intracellular trafficking of the both LPS acceptors, it seemed likely that the pro-inflammatory reaction could be modulated by flotillins. Flotillin-1 and -2 are scaffolding proteins associated with the plasma membrane and also with endo-membranes, affecting both the plasma membrane dynamics and intracellular protein trafficking...
April 23, 2024: Cellular and Molecular Life Sciences: CMLS
https://read.qxmd.com/read/38638885/biomechanics-mediated-endocytosis-in-atherosclerosis
#7
REVIEW
Jinxuan Wang, Jianxiong Xu, Tianhu Liu, Chaoping Yu, Fengcheng Xu, Guixue Wang, Shun Li, Xiaozhen Dai
Biomechanical forces, including vascular shear stress, cyclic stretching, and extracellular matrix stiffness, which influence mechanosensitive channels in the plasma membrane, determine cell function in atherosclerosis. Being highly associated with the formation of atherosclerotic plaques, endocytosis is the key point in molecule and macromolecule trafficking, which plays an important role in lipid transportation. The process of endocytosis relies on the mobility and tension of the plasma membrane, which is sensitive to biomechanical forces...
2024: Frontiers in Cardiovascular Medicine
https://read.qxmd.com/read/38626007/egfr-dependent-endocytosis-of-wnt9a-and-fzd9b-promotes-%C3%AE-catenin-signaling-during-hematopoietic-stem-cell-development-in-zebrafish
#8
JOURNAL ARTICLE
Nicole Nguyen, Kelsey A Carpenter, Jessica Ensing, Carla Gilliland, Emma J Rudisel, Emily M Mu, Kate E Thurlow, Timothy J Triche, Stephanie Grainger
Cell-to-cell communication through secreted Wnt ligands that bind to members of the Frizzled (Fzd) family of transmembrane receptors is critical for development and homeostasis. Wnt9a signals through Fzd9b, the co-receptor LRP5 or LRP6 (LRP5/6), and the epidermal growth factor receptor (EGFR) to promote early proliferation of zebrafish and human hematopoietic stem cells during development. Here, we developed fluorescently labeled, biologically active Wnt9a and Fzd9b fusion proteins to demonstrate that EGFR-dependent endocytosis of the ligand-receptor complex was required for signaling...
April 16, 2024: Science Signaling
https://read.qxmd.com/read/38597132/atp2b4-is-an-essential-gene-for-epidermal-growth-factor-induced-macropinocytosis-in-a431-cells
#9
JOURNAL ARTICLE
Shunsuke Yoshie, Masashi Kuriyama, Masashi Maekawa, Wei Xu, Takuro Niidome, Shiroh Futaki, Hisaaki Hirose
Macropinocytosis (MPC) is a large-scale endocytosis pathway that involves actin-dependent membrane ruffle formation and subsequent ruffle closure to generate macropinosomes for the uptake of fluid-phase cargos. MPC is categorized into two types: constitutive and stimuli-induced. Constitutive MPC in macrophages relies on extracellular Ca2+ sensing by a calcium-sensing receptor. However, the link between stimuli-induced MPC and Ca2+ remains unclear. Here, we find that both intracellular and extracellular Ca2+ are required for epidermal growth factor (EGF)-induced MPC in A431 human epidermoid carcinoma cells...
April 10, 2024: Genes to Cells: Devoted to Molecular & Cellular Mechanisms
https://read.qxmd.com/read/38564492/the-heavy-subunit-of-ferritin-stimulates-nlrp3-inflammasomes-in-hepatic-stellate-cells-through-icam-1-to-drive-hepatic-inflammation
#10
JOURNAL ARTICLE
Manuel A Fernandez-Rojo, Michael A Pearen, Anita G Burgess, Maria P Ikonomopoulou, Diem Hoang-Le, Berit Genz, Silvia L Saggiomo, Sujeevi S K Nawaratna, Maura Poli, Regina Reissmann, Geoffrey N Gobert, Urban Deutsch, Britta Engelhardt, Andrew J Brooks, Alun Jones, Paolo Arosio, Grant A Ramm
Serum ferritin concentrations increase during hepatic inflammation and correlate with the severity of chronic liver disease. Here, we report a molecular mechanism whereby the heavy subunit of ferritin (FTH) contributes to hepatic inflammation. We found that FTH induced activation of the NLRP3 inflammasome and secretion of the proinflammatory cytokine interleukin-1β (IL-1β) in primary rat hepatic stellate cells (HSCs) through intercellular adhesion molecule-1 (ICAM-1). FTH-ICAM-1 stimulated the expression of Il1b , NLRP3 inflammasome activation, and the processing and secretion of IL-1β in a manner that depended on plasma membrane remodeling, clathrin-mediated endocytosis, and lysosomal destabilization...
April 2, 2024: Science Signaling
https://read.qxmd.com/read/38561687/physiological-and-transcriptomic-comparisons-shed-light-on-the-cold-stress-response-mechanisms-of-dendrobium-spp
#11
JOURNAL ARTICLE
Zhiyuan Li, Shunjiao Lu, Shuangshuang Yi, Shunjin Mo, Xiaoyun Yu, Junmei Yin, Changqing Zhang
BACKGROUND: Dendrobium spp. comprise a group of tropical orchids with ornamental and medicinal value. Dendrobium spp. are sensitive to low temperature, and the underlying cold response regulatory mechanisms in this group are unclear. To understand how these plants respond to cold stress, we compared the transcriptomic responses of the cold-tolerant cultivar 'Hongxing' (HX) and the cold-sensitive cultivar 'Sonia Hiasakul' (SH) to cold stress. RESULTS: Chemometric results showed that the physiological response of SH in the later stages of cold stress is similar to that of HX throughout the cold treatment...
April 1, 2024: BMC Plant Biology
https://read.qxmd.com/read/38533085/membrane-trafficking-alterations-in-breast-cancer-progression
#12
REVIEW
Andreia Ferreira, Pedro Castanheira, Cristina Escrevente, Duarte C Barral, Teresa Barona
Breast cancer (BC) is the most common type of cancer in women, and remains one of the major causes of death in women worldwide. It is now well established that alterations in membrane trafficking are implicated in BC progression. Indeed, membrane trafficking pathways regulate BC cell proliferation, migration, invasion, and metastasis. The 22 members of the ADP-ribosylation factor (ARF) and the >60 members of the rat sarcoma (RAS)-related in brain (RAB) families of small GTP-binding proteins (GTPases), which belong to the RAS superfamily, are master regulators of membrane trafficking pathways...
2024: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/38498362/an-ensemble-computational-model-for-prediction-of-clathrin-protein-by-coupling-machine-learning-with-discrete-cosine-transform
#13
JOURNAL ARTICLE
Majdi Khalid, Farman Ali, Wajdi Alghamdi, Abdulrahman Alzahrani, Raed Alsini, Ahmed Alzahrani
Clathrin protein (CP) plays a pivotal role in numerous cellular processes, including endocytosis, signal transduction, and neuronal function. Dysregulation of CP has been associated with a spectrum of diseases. Given its involvement in various cellular functions, CP has garnered significant attention for its potential applications in drug design and medicine, ranging from targeted drug delivery to addressing viral infections, neurological disorders, and cancer. The accurate identification of CP is crucial for unraveling its function and devising novel therapeutic strategies...
March 18, 2024: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/38442648/control-of-the-signaling-role-of-ptdins-4-p-at-the-plasma-membrane-through-h-2-o-2-dependent-inactivation-of-synaptojanin-2-during-endocytosis
#14
JOURNAL ARTICLE
Su In Jo, Suree Kim, Jung Mi Lim, Sue Goo Rhee, Bo-Gyeong Jeong, Sun-Shin Cha, Jae-Byum Chang, Dongmin Kang
Phosphatidylinositol 4,5-bisphosphate [PtdIns(4,5)P2 ] is implicated in various processes, including hormone-induced signal transduction, endocytosis, and exocytosis in the plasma membrane. However, how H2 O2 accumulation regulates the levels of PtdIns(4,5)P2 in the plasma membrane in cells stimulated with epidermal growth factors (EGFs) is not known. We show that a plasma membrane PtdIns(4,5)P2 -degrading enzyme, synaptojanin (Synj) phosphatase, is inactivated through oxidation by H2 O2 . Intriguingly, H2 O2 inhibits the 4-phosphatase activity of Synj but not the 5-phosphatase activity...
February 29, 2024: Redox Biology
https://read.qxmd.com/read/38432037/the-emerging-roles-of-clathrin-mediated-endocytosis-in-plant-development-and-stress-responses
#15
REVIEW
Chi Zhang, Liang Chen, Suiwen Hou
Clathrin-mediated endocytosis (CME) is a highly conserved pathway that plays a crucial role in the endocytosis of plasma membrane proteins in eukaryotic cells. The pathway is initiated when the adaptor protein complex 2 (AP2) and TPLATE complex (TPC) work together to recognize cargo proteins and recruit clathrin. This review provides a concise overview of the functions of each subunit of AP2 and TPC, and highlights the involvement of CME in various biological processes, such as pollen development, root development, nutrient transport, extracellular signal transduction, auxin polar transport, hyperosmotic stress, salinity stress, high ammonium stress, and disease resistance...
April 2024: Journal of Plant Physiology
https://read.qxmd.com/read/38408550/uptake-pathways-of-cell-penetrating-peptides-in-the-context-of-drug-delivery-gene-therapy-and-vaccine-development
#16
JOURNAL ARTICLE
Moataz Dowaidar
Cell-penetrating peptides have been extensively utilized for the purpose of facilitating the intracellular delivery of cargo that is impermeable to the cell membrane. The researchers have exhibited proficient delivery capabilities for oligonucleotides, thereby establishing cell-penetrating peptides as a potent instrument in the field of gene therapy. Furthermore, they have demonstrated a high level of efficiency in delivering several additional payloads. Cell penetrating peptides (CPPs) possess the capability to efficiently transport therapeutic molecules to specific cells, hence offering potential remedies for many illnesses...
February 24, 2024: Cellular Signalling
https://read.qxmd.com/read/38374219/multiple-roles-for-the-cytoplasmic-c-terminal-domains-of-the-yeast-cell-surface-receptors-rgt2-and-snf3-in-glucose-sensing-and-signaling
#17
JOURNAL ARTICLE
Jeong-Ho Kim, Levi Mailloux, Daniel Bloor, Haeun Tae, Han Nguyen, Morgan McDowell, Jaqueline Padilla, Anna DeWaard
The plasma membrane proteins Rgt2 and Snf3 are glucose sensing receptors (GSRs) that generate an intracellular signal for the induction of gene expression in response to high and low extracellular glucose concentrations, respectively. The GSRs consist of a 12-transmembrane glucose recognition domain and a cytoplasmic C-terminal signaling tail. The GSR tails are dissimilar in length and sequence, but their distinct roles in glucose signal transduction are poorly understood. Here, we show that swapping the tails between Rgt2 and Snf3 does not alter the signaling activity of the GSRs, so long as their tails are phosphorylated in a Yck-dependent manner...
February 19, 2024: Scientific Reports
https://read.qxmd.com/read/38328397/the-yeast-14-3-3-proteins-bmh1-and-bmh2-regulate-key-signaling-pathways
#18
REVIEW
Veronika Obsilova, Tomas Obsil
Cell signaling regulates several physiological processes by receiving, processing, and transmitting signals between the extracellular and intracellular environments. In signal transduction, phosphorylation is a crucial effector as the most common posttranslational modification. Selectively recognizing specific phosphorylated motifs of target proteins and modulating their functions through binding interactions, the yeast 14-3-3 proteins Bmh1 and Bmh2 are involved in catabolite repression, carbon metabolism, endocytosis, and mitochondrial retrograde signaling, among other key cellular processes...
2024: Frontiers in Molecular Biosciences
https://read.qxmd.com/read/38295915/insights-into-the-role-of-derailed-endocytic-trafficking-pathway-in-cancer-from-the-perspective-of-cancer-hallmarks
#19
REVIEW
Hongjie Guo, Chen Zhou, Mingming Zheng, Jie Zhang, Honghai Wu, Qiaojun He, Ling Ding, Bo Yang
The endocytic trafficking pathway is a highly organized cellular program responsible for the regulation of membrane components and uptake of extracellular substances. Molecules internalized into the cell through endocytosis will be sorted for degradation or recycled back to membrane, which is determined by a series of sorting events. Many receptors, enzymes, and transporters on the membrane are strictly regulated by endocytic trafficking process, and thus the endocytic pathway has a profound effect on cellular homeostasis...
January 29, 2024: Pharmacological Research: the Official Journal of the Italian Pharmacological Society
https://read.qxmd.com/read/38263196/in-vivo-identification-of-drosophila-rhodopsin-interaction-partners-by-biotin-proximity-labeling
#20
JOURNAL ARTICLE
Nilofar Feizy, Sarah Franziska Leuchtenberg, Christine Steiner, Berit Würtz, Leo Fliegner, Armin Huber
Proteins exert their function through protein-protein interactions. In Drosophila, G protein-coupled receptors like rhodopsin (Rh1) interact with a G protein to activate visual signal transduction and with arrestins to terminate activation. Also, membrane proteins like Rh1 engage in protein-protein interactions during folding within the endoplasmic reticulum, during their vesicular transport and upon removal from the cell surface and degradation. Here, we expressed a Rh1-TurboID fusion protein (Rh1::TbID) in Drosophila photoreceptors to identify in vivo Rh1 interaction partners by biotin proximity labeling...
January 23, 2024: Scientific Reports
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