keyword
https://read.qxmd.com/read/38662439/understanding-and-computational-design-of-genetic-circuits-of-metabolic-networks
#1
JOURNAL ARTICLE
Alicia Berkvens, Luis Salinas, Maaike Remeijer, Robert Planqué, Bas Teusink, Frank J Bruggeman
The expression of metabolic proteins is controlled by genetic circuits, matching metabolic demands and changing environmental conditions. Ideally, this regulation brings about a competitive level of metabolic fitness. Understanding how cells can achieve a robust (close-to-optimal) functioning of metabolism by appropriate control of gene expression aids synthetic biology by providing design criteria of synthetic circuits for biotechnological purposes. It also extends our understanding of the designs of genetic circuitry found in nature such as metabolite control of transcription factor activity, promoter architectures and transcription factor dependencies, and operon composition (in bacteria)...
April 25, 2024: Essays in Biochemistry
https://read.qxmd.com/read/38661484/a-synthetic-position-decoding-technology-for-rotary-transformers-based-rotor-position-measurement-system
#2
JOURNAL ARTICLE
Jun Cai, Xiaolan Dou, Zeyuan Liu, Adrian David Cheok, Yan Ying, Xin Zhang
This article proposes a rotary transformer position decoding scheme for motor drive control. In this scheme, a simple analog circuit is used to design the excitation circuit and signal conditioning circuit. Demodulate the modulated sine/cosine signal through software and decode it through a phase locked loop (PLL) to obtain the implemented position signal. This scheme completely avoids the use of traditional, specialized decoding chips. At the same time, in order to make the position decoding scheme applicable to different motor drive control platforms, a single-cycle partition average based pulse signal estimation method is proposed for converting the angle position into pulse signals similar to the output of an encoder's phases A, B, and Z, which are referred to as A/B/Z signals in the paper...
April 1, 2024: Review of Scientific Instruments
https://read.qxmd.com/read/38660830/synthesis-and-characterization-of-mof-derived-structures-recent-advances-and-future-perspectives
#3
REVIEW
Amir Farokh Payam, Sameh Khalil, Supriya Chakrabarti
Due to their facile tunability, metal-organic frameworks (MOFs) are employed as precursors and templates to construct advanced functional materials with unique and desired chemical, physical, mechanical, and morphological properties. By tuning MOF precursor composition and manipulating conversion processes, various MOF-derived materials commonly known as MOF derivatives can be constructed. The possibility of controlled and predictable properties makes MOF derivatives a preferred choice for numerous advanced technological applications...
April 25, 2024: Small
https://read.qxmd.com/read/38660762/low-concentrations-of-tnf-%C3%AE-in%C3%A2-vitro-transform-the-phenotype-of-vascular-smooth-muscle-cells-and-enhance-their-survival-in-a-three-dimensional-culture-system
#4
JOURNAL ARTICLE
Xu-Heng Sun, Hong-Jing Jiang, Qing Liu, Cong Xiao, Jian-Yi Xu, Yindi Wu, Jing-Yi Mei, Shu-Ting Wu, Zhan-Yi Lin
BACKGROUND: Vascular smooth muscle cells (VSMCs) are commonly used as seed cells in tissue-engineered vascular constructions. However, their variable phenotypes and difficult to control functions pose challenges. This study aimed to overcome these obstacles using a three-dimensional culture system. METHODS: Calf VSMCs were administered tumor necrosis factor-alpha (TNF-α) before culturing in two- and three-dimensional well plates and polyglycolic acid (PGA) scaffolds, respectively...
April 25, 2024: Artificial Organs
https://read.qxmd.com/read/38660608/photoromp-the-future-is-bright
#5
REVIEW
Andrew J Greenlee, Raymond A Weitekamp, Jeffrey C Foster, Samuel C Leguizamon
Since the earliest investigations of olefin metathesis catalysis, light has been the choice for controlling the catalyst activity on demand. From the perspective of energy efficiency, temporal and spatial control, and selectivity, photochemistry is not only an attractive alternative to traditional thermal manufacturing techniques but also arguably a superior manifold for advanced applications like additive manufacturing (AM). In the last three decades, pioneering work in the field of ring-opening metathesis polymerization (ROMP) has broadened the scope of material properties achievable through AM, particularly using light as both an activating and deactivating stimulus...
April 19, 2024: ACS Catalysis
https://read.qxmd.com/read/38660381/striving-for-uniformity-a-review-on-advances-and-challenges-to-achieve-uniform-polyethylene-glycol
#6
REVIEW
Cláudia Bento, Marianna Katz, Maria M M Santos, Carlos A M Afonso
Poly(ethylene glycol) (PEG) is the polymer of choice in drug delivery systems due to its biocompatibility and hydrophilicity. For over 20 years, this polymer has been widely used in the drug delivery of small drugs, proteins, oligonucleotides, and liposomes, improving the stability and pharmacokinetics of many drugs. However, despite the extensive clinical experience with PEG, concerns have emerged related to its use. These include hypersensitivity, purity, and nonbiodegradability. Moreover, conventional PEG is a mixture of polymers that can complicate drug synthesis and purification leading to unwanted immunogenic reactions...
April 19, 2024: Organic Process Research & Development
https://read.qxmd.com/read/38660313/comparison-of-the-effectiveness-four-years-after-homo-hetero-prime-boost-with-10-%C3%AE-g-hp-and-20-%C3%AE-g-cho-recombinant-hepatitis-b-vaccine-at-1-and-6-months-in-maternal-hbsag-negative-children
#7
COMPARATIVE STUDY
Zhiying Yin, Tingcui Wen, Canya Fu, Junji Li, Quanjun Fang, Xiaoying Gong, Jialing You, Shuangqing Wang, Canjie Zheng
INTRODUCTION: Limited data were available on the effectivenessfour years after Homo or Hetero prime-boost with 10 μg Hansenulapolymorpha recombinant hepatitis B vaccine (HepB-HP) and 20 μgChinese hamster ovary cell HepB (HepB-CHO). METHODS: A crosssectional study was performed in maternalhepatitis B surface antigen (HBsAg)-negative children whoreceived one dose of 10 μg HepB-HP at birth, Homo or Heteroprime-boost with 10 μg HepB-HP and 20 μg HepB-CHO at 1 and 6months...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38659921/synthetic-g-protein-coupled-receptors-for-programmable-sensing-and-control-of-cell-behavior
#8
Nicholas A Kalogriopoulos, Reika Tei, Yuqi Yan, Matthew Ravalin, Yulong Li, Alice Ting
Synthetic receptors that mediate antigen-dependent cell responses are transforming therapeutics, drug discovery, and basic research. However, established technologies such as chimeric antigen receptors (CARs) can only detect immobilized antigens, have limited output scope, and lack built-in drug control. Here, we engineer synthetic G protein-coupled receptors (GPCRs) capable of driving a wide range of native or nonnative cellular processes in response to user-defined antigen. We achieve modular antigen gating by engineering and fusing a conditional auto-inhibitory domain onto GPCR scaffolds...
April 15, 2024: bioRxiv
https://read.qxmd.com/read/38659663/colloidal-synthesis-of-pbbr-2-2-amtp-2-pbbr-4-a-periodic-perovskite-heterostructured-nanocrystal
#9
JOURNAL ARTICLE
Emma H Massasa, Lotte T J Kortstee, Rachel Lifer, Saar Shaek, Boaz Pokroy, Ivano E Castelli, Yehonadav Bekenstein
Heterostructures in nanoparticles challenge our common understanding of interfaces due to quantum confinement and size effects, giving rise to synergistic properties. An alternating heterostructure in which multiple and reoccurring interfaces appear in a single nanocrystal is hypothesized to accentuate such properties. We present a colloidal synthesis for perovskite layered heterostructure nanoparticles with a (PbBr2 )2 (AMTP)2 PbBr4 composition. By varying the synthetic parameters, such as synthesis temperature, solvent, and selection of precursors, we control particle size, shape, and product priority...
April 17, 2024: Crystal Growth & Design
https://read.qxmd.com/read/38659472/evaluation-of-anthelminthic-and-antiprotozoal-activity-of-myrrh-commiphora-myrrha-methanolic-extract
#10
JOURNAL ARTICLE
S Albasyouni, S Al-Quraishy, N Al-Hoshani, T Al-Otaibi, E M Al-Shaebi, R Abdel-Gaber
To treat and control parasitic infections, traditional medical remedies using plant products are utilized as antiparasitic agents rather than standard synthetic chemicals due to drug resistance. Myrrh, a resinous exudate of Commiphora myrrha (Burseraceae), is a powerful antioxidant with a variety of medicinal uses. This study aimed to investigate the effect of the myrrh methanolic extract (MyE) of three concentrations (100, 50, and 25 mg/ml) on the sporulation of oocysts and as an anthelminthic effector via in vitro study...
March 2024: Helminthologia
https://read.qxmd.com/read/38659225/controlling-car-t-cell-activity-and-specificity-with-synthetic-sparx-adapters
#11
JOURNAL ARTICLE
Justin P Edwards, Jeffrey S Swers, Janine M Buonato, Liubov Zaritskaya, C Jenny Mu, Ankit Gupta, Sigal Shachar, David W LaFleur, Laura K Richman, David A Tice, David M Hilbert
While conventional CAR-T therapies have shown remarkable clinical activity in some settings, they can induce severe toxicities and are rarely curative. To address these challenges, we developed a controllable cell therapy where synthetic D-Domain-containing proteins (SparX) bind one or more tumor antigens and mark those cells for elimination by genetically modified T cells (ARC-T). The chimeric antigen receptor was engineered with a D-Domain that specifically binds to the SparX protein via a unique TAG, derived from human alpha-fetoprotein...
April 23, 2024: Molecular Therapy
https://read.qxmd.com/read/38658318/macrocycle-based-charge-transfer-cocrystals-with-dynamically-reversible-chiral-self-sorting-display-chain-length-selective-vapochromism-to-alkyl-ketones
#12
JOURNAL ARTICLE
Meng-Jie Gu, Wei-Chen Guo, Xiao-Ni Han, Ying Han, Chuan-Feng Chen
Chirality-driven self-sorting plays an essential role in controlling the biofunction of biosystems, such as the chiral double-helix structure of DNA from self-recognition by hydrogen bonding. However, achieving precise control over the chiral self-sorted structures and their functional properties for the bioinspired supramolecular systems still remains a challenge, not to mention realizing dynamically reversible regulation. Herein, we report an unprecedented saucer[4]arene-based charge transfer (CT) cocrystal system with dynamically reversible chiral self-sorting synergistically induced by chiral triangular macrocycle and organic vapors...
April 24, 2024: Angewandte Chemie
https://read.qxmd.com/read/38658314/discovery-of-a-plant-14-3-3-inhibitor-possessing-isoform-selectivity-and-in-planta-activity
#13
JOURNAL ARTICLE
Kotaro Nishiyama, Yusuke Aihara, Takehiro Suzuki, Koji Takahashi, Toshinori Kinoshita, Naoshi Dohmae, Ayato Sato, Shinya Hagihara
Synthetic modulators for plant 14-3-3s are promising chemical tools both for understanding the 14-3-3-related signaling pathways and controlling plant physiology. Here, we describe a novel small-molecule inhibitor for 14-3-3 proteins ofArabidopsis thaliana. The inhibitor was identified from unexpected products in DMSO stock solution of an in-house chemical library. Mass spectroscopy, mutant-based analyses, fluorescence polarization assays, and thermal shift assaysrevealed that the inhibitor covalently binds to an allosteric site of 14-3-3 with isoform selectivity...
April 24, 2024: Angewandte Chemie
https://read.qxmd.com/read/38657865/ptip-ufmylation-promotes-replication-fork-degradation-in-brca1-deficient-cells
#14
JOURNAL ARTICLE
Qunsong Tan, Xingzhi Xu
"BRCAness" defines cancers that are homologous recombination (HR)-deficient due to BRCA1 or BRCA2 mutations. These mutations confer synthetic lethality with PARP1/2 inhibitors. The chromatin regulator PTIP promotes stalled replication fork degradation in "BRCAness" cells, but the underlying mechanism by which PTIP regulates stalled replication fork stability is unclear. Here, we performed a series of in vitro analyses to dissect the function of UFMylation in regulating fork stabilization in BRCA1-deficient cells...
April 22, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38657813/review-of-per-and-poly-fluoroalkyl-treatment-in-combustion-based-thermal-waste-systems-in-the-united-states
#15
JOURNAL ARTICLE
Keith Weitz, Debra Kantner, Andrew Kessler, Haley Key, Judd Larson, Wanda Bodnar, Sameer Parvathikar, Lynn Davis, Nicole Robey, Philip Taylor, Florentino De la Cruz, Thabet Tolaymat, Nathan Weber, William Linak, Jonathan Krug, Lara Phelps
Per- and poly-fluoroalkyl substances (PFAS) are a class of synthetic chemicals known for their widespread presence and environmental persistence. Carbon-fluorine (C-F) bonds are major components among PFAS and among the strongest organic bonds, thus destroying PFAS may present significant challenge. Thermal treatment such as incineration is an effective and approved method for destroying many halogenated organic chemicals. Here, we present the results of existing studies and testing at combustion-based thermal treatment facilities and summarize what is known regarding PFAS destruction and mineralization at such units...
April 22, 2024: Science of the Total Environment
https://read.qxmd.com/read/38657604/synthetic-protein-circuits-for-programmable-control-of-mammalian-cell-death
#16
JOURNAL ARTICLE
Shiyu Xia, Andrew C Lu, Victoria Tobin, Kaiwen Luo, Lukas Moeller, D Judy Shon, Rongrong Du, James M Linton, Margaret Sui, Felix Horns, Michael B Elowitz
Natural cell death pathways such as apoptosis and pyroptosis play dual roles: they eliminate harmful cells and modulate the immune system by dampening or stimulating inflammation. Synthetic protein circuits capable of triggering specific death programs in target cells could similarly remove harmful cells while appropriately modulating immune responses. However, cells actively influence their death modes in response to natural signals, making it challenging to control death modes. Here, we introduce naturally inspired "synpoptosis" circuits that proteolytically regulate engineered executioner proteins and mammalian cell death...
April 16, 2024: Cell
https://read.qxmd.com/read/38657337/therapeutic-potential-of-the-linalool-against-cadmium-induced-testicular-tissue-damage
#17
JOURNAL ARTICLE
Tuba Yalçın, Sercan Kaya
Cadmium (Cd) is a heavy metal that has harmful effects and is one of the contaminants found in the environment. Cd exposure causes important pathophysiological processes, such as reproductive toxicity. Linalool (Lnl) is a monoterpene, a component of essential oils known to be produced synthetically. Additionally, Lnl has many important beneficial effects, such as anti-inflammatory and antioxidant effects. The objective of this study is to determine whether Lnl has a healing impact in opposition to testicular tissue damage due to Cd exposure...
April 15, 2024: Journal of Trace Elements in Medicine and Biology
https://read.qxmd.com/read/38657271/a-rationally-designed-synthetic-antiviral-peptide-binder-targeting-the-receptor-binding-domain-of-sars-cov-2
#18
JOURNAL ARTICLE
Lalita Mohan Behera, Pulkit Kr Gupta, Manaswini Ghosh, Sucharita Shadangi, Soumendra Rana
The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), a novel coronavirus, is the causative agent responsible for the spread of the COVID19 pandemic across the globe. The global impact of the COVID19 pandemic, the successful approval of vaccines for controlling the pandemic, and the further resurgence of COVID19 necessitate the exploration and validation of alternative therapeutic avenues targeting SARS-CoV-2. The initial entry and further invasion by SARS-CoV-2 require strong protein-protein interactions (PPIs) between the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein and the human angiotensin-converting enzyme 2 (ACE2) receptors expressed on the cell surfaces of various tissues...
April 24, 2024: Journal of Physical Chemistry. B
https://read.qxmd.com/read/38657031/hierarchical-self-assembly-of-multidimensional-functional-materials-from-sequence-defined-peptoids
#19
JOURNAL ARTICLE
Li Shao, Dehong Hu, Shao-Liang Zheng, Thi Kim Hoang Trinh, Wenhao Zhou, Haoyu Wang, Yanxu Zong, Changning Li, Chun-Long Chen
Hierarchical self-assembly represents a powerful strategy for the fabrication of functional materials across various length scales. However, achieving precise formation of functional hierarchical assemblies remains a significant challenge and requires a profound understanding of molecular assembly interactions. In this study, we present a molecular-level understanding of the hierarchical assembly of sequence-defined peptoids into multidimensional functional materials, including twisted nanotube bundles serving as a highly efficient artificial light harvesting system...
April 24, 2024: Angewandte Chemie
https://read.qxmd.com/read/38656968/excited-state-dynamics-in-unidirectional-photochemical-molecular-motors
#20
REVIEW
Palas Roy, Andy S Sardjan, Wesley R Browne, Ben L Feringa, Stephen R Meech
Unidirectional photochemically driven molecular motors (PMMs) convert the energy of absorbed light into continuous rotational motion. As such they are key components in the design of molecular machines. The prototypical and most widely employed class of PMMs is the overcrowded alkenes, where rotational motion is driven by successive photoisomerization and thermal helix inversion steps. The efficiency of such PMMs depends upon the speed of rotation, determined by the rate of ground state thermal helix inversion, and the quantum yield of photoisomerization, which is dependent on the excited state energy landscape...
April 24, 2024: Journal of the American Chemical Society
keyword
keyword
166285
1
2
Fetch more papers »
Fetching more papers... Fetching...
Remove bar
Read by QxMD icon Read
×

Save your favorite articles in one place with a free QxMD account.

×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"

We want to hear from doctors like you!

Take a second to answer a survey question.