keyword
https://read.qxmd.com/read/38662454/rna-splicing-analysis-deciphers-developmental-hierarchies-and-reveals-therapeutic-targets-in-adult-glioma
#1
JOURNAL ARTICLE
Xiao Song, Deanna Tiek, Shunichiro Miki, Tianzhi Huang, Minghui Lu, Anshika Goenka, Rebeca P Iglesia, Xiaozhou Yu, Runxin Wu, Maya N Walker, Chang Zeng, Hardik Shah, Shao Huan Samuel Weng, Allen Huff, Wei Zhang, Tomoyuki Koga, Christopher G Hubert, Craig M Horbinski, Frank F Furnari, Bo Hu, Shi-Yuan Cheng
Widespread alterations in RNA alternative splicing (AS) have been identified in adult gliomas. However, their regulatory mechanism, biological significance, and therapeutic potential remain largely elusive. Here, using a computational approach with both bulk and single cell RNA-sequencing, we uncover a prognostic AS signature linked with neural developmental hierarchies. Using advanced iPSC glioma models driven by glioma driver mutations, we show that this AS signature could be enhanced by EGFRvIII and inhibited by in situ IDH1 mutation...
April 25, 2024: Journal of Clinical Investigation
https://read.qxmd.com/read/38297405/preclinical-translational-platform-of-neuroinflammatory-disease-biology-relevant-to-neurodegenerative-disease
#2
JOURNAL ARTICLE
Kelley C Larson, Lauren H Martens, Michael Marconi, Christopher Dejesus, Suzanne Bruhn, Thomas A Miller, Barbara Tate, Jonathan M Levenson
Neuroinflammation is a key driver of neurodegenerative disease, however the tools available to model this disease biology at the systems level are lacking. We describe a translational drug discovery platform based on organotypic culture of murine cortical brain slices that recapitulate disease-relevant neuroinflammatory biology. After an acute injury response, the brain slices assume a chronic neuroinflammatory state marked by transcriptomic profiles indicative of activation of microglia and astrocytes and loss of neuronal function...
January 31, 2024: Journal of Neuroinflammation
https://read.qxmd.com/read/37934569/influences-and-mechanism-of-erythropoietin-on-the-cognitive-function-of-vascular-dementia-rats
#3
JOURNAL ARTICLE
Zhipeng Tang, Xiuqin Li, Nan Yin, Ming Zhao, Qingchuan Hu, Peiyuan Lv
PURPOSE: To investigate the influences and mechanism of erythropoietin (EPO) on the cognitive function of vascular dementia (VD) rats. METHODS: 1) Spatial memory capacity was assessed by Morris water maze test; 2) Pathological conditions of brain tissues were detected by hematoxylin-eosin (HE) staining; 3) The effect of treatment on apoptosis was observed by terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling (TUNEL) staining; 4) Western blotting was used to examine the protein expression in hippocampal neurons...
November 6, 2023: Aging
https://read.qxmd.com/read/37552362/ptpn11-variant-may-be-a-prognostic-indicator-of-idh-wildtype-glioblastoma-in-a-comprehensive-genomic-profiling-cohort
#4
JOURNAL ARTICLE
Ryohei Otani, Masachika Ikegami, Ryoji Yamada, Hirohisa Yajima, Shinji Kawamura, Sakura Shimizu, Shota Tanaka, Shunsaku Takayanagi, Hirokazu Takami, Tatsuro Yamaguchi
PURPOSE: Glioblastoma (GBM) is the most common type of primary malignant brain tumor and has a poor prognosis. Identifying novel targets and stratification strategies is urgently needed to improve patient survival. The present study aimed to identify clinically relevant genomic alterations in IDH-wildtype GBM using data from comprehensive genomic profiling (CGP) assays performed nationwide in Japan. METHODS: The CGP assay results of 392 IDH-wildtype GBM cases performed between October 2019 and February 2023 obtained from the Center for Cancer Genomics and Advanced Therapeutics were retrospectively analyzed...
August 8, 2023: Journal of Neuro-oncology
https://read.qxmd.com/read/37506473/neonatal-malnutrition-impacts-fibroblast-growth-factor-21-induced-neuron-neurite-outgrowth-and-growth-hormone-releasing-hormone-secretion-in-neonatal-mouse-brain
#5
JOURNAL ARTICLE
Yuko Yoshida, Mana Oikawa, Taiga Shimada, Ai Shinomiya, Yoshifumi Watanabe
Neonatal malnutrition is one of the most common causes of neurological disorders. However, the mechanism of action of the factors associated with neonatal nutrition in the brain remains unclear. In this study, we focused on fibroblast growth factor (FGF) 21 to elucidate the effects of malnutrition on the neonatal brain. FGF21 is an endocrine factor produced by the liver during lactation which is the main source of nutrition during the neonatal period. In this study, malnourishment during nursing mice induced decreased levels of Fgf21 mRNA in the liver and decreased levels of FGF21 in the serum...
July 20, 2023: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/36430334/aberrant-cortical-layer-development-of-brain-organoids-derived-from-noonan-syndrome-ipscs
#6
JOURNAL ARTICLE
Bumsoo Kim, Yongjun Koh, Hyunsu Do, Younghee Ju, Jong Bin Choi, Gahyang Cho, Han-Wook Yoo, Beom Hee Lee, Jinju Han, Jong-Eun Park, Yong-Mahn Han
Noonan syndrome (NS) is a genetic disorder mainly caused by gain-of-function mutations in Src homology region 2-containing protein tyrosine phosphatase 2 (SHP2). Although diverse neurological manifestations are commonly diagnosed in NS patients, the mechanisms as to how SHP2 mutations induce the neurodevelopmental defects associated with NS remain elusive. Here, we report that cortical organoids (NS-COs) derived from NS-induced pluripotent stem cells (iPSCs) exhibit developmental abnormalities, especially in excitatory neurons (ENs)...
November 10, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36193769/engineered-extracellular-vesicles-with-shp2-high-expression-promote-mitophagy-for-alzheimer-s-disease-treatment
#7
JOURNAL ARTICLE
Fang Xu, Yi Wu, Qianyu Yang, Ying Cheng, Jialu Xu, Yue Zhang, Huaxing Dai, Beilei Wang, Qingle Ma, Yitong Chen, Fang Lin, Chao Wang
Mitochondrial dysfunction is a fundamental pathological feature of Alzheimer's disease (AD). However, toxicity and poor brain enrichment of existing mitophagy inducers limit their further applications. In this study, we develops a platform for AD therapy using nanosized mesenchymal stem cells-derived extracellular vesicles with tyrosine phosphatase-2 (SHP2) high-expression (MSC-EVs-SHP2). The high blood-brain barrier penetration ability of MSC-EVs-SHP2 is demonstrated in AD-mice, facilitating SHP2 delivery to the brain...
October 4, 2022: Advanced Materials
https://read.qxmd.com/read/35853558/sciatic-nerve-block-downregulates-the-bdnf-pathway-to-alleviate-the-neonatal-incision-induced-exaggeration-of-incisional-pain-via-decreasing-microglial-activation
#8
JOURNAL ARTICLE
Xu Ding, Fei-Fei Liao, Li Su, Xi Yang, Wei Yang, Qing-Hua Ren, Jin-Zhe Zhang, Huan-Min Wang
Sciatic nerve block is under investigation as a possible therapeutic strategy for neonatal injury-induced exaggeration of pain responses to reinjury. Spinal microglial priming, brain-derived neurotrophic factor (BDNF) and Src homology-2 domain-containing protein tyrosine phosphatase-2 (SHP2) participate in exaggerated incisional pain induced by neonatal incision. However, effects of sciatic nerve block on exacerbated incisional pain and underlying mechanisms remain unclear. Here, we demonstrated that sciatic nerve block alleviates pain hypersensitivity and microglial activation in rats subjected to neonatal incision and adult incision (nIN-IN)...
July 16, 2022: Brain, Behavior, and Immunity
https://read.qxmd.com/read/35666713/tlr3-deletion-inhibits-programmed-necrosis-of-brain-cells-in-neonatal-mice-with-sevoflurane-induced-cognitive-dysfunction
#9
JOURNAL ARTICLE
Qi Zhang, Yanan Li, Jiaxu Yu, Chunping Yin, Junfei Guo, Juan Zhao, Qiujun Wang
This research aimed to explore the influence of TLR deletion on sevoflurane-induced postoperative cognitive dysfunction in neonatal mice. Herein, WT and TLR3 KO neonatal mice, each with 24, were randomly divided into control group, sevoflurane group, and TLR3-/- +sevoflurane group. The hippocampal neurons of WT, TLR3 KO and RIP3 KO neonatal mice in C group, SEV group, TLR3-/- +SEV group and RIP3-/- +SEV group were extracted for in vitro experiments. The results revealed the degeneration and necrosis of nerve cells in SEV group...
June 6, 2022: Aging
https://read.qxmd.com/read/35657457/interactions-among-brain-derived-neurotrophic-factor-and-neuroimmune-pathways-are-key-components-of-the-major-psychiatric-disorders
#10
REVIEW
Nikolay Mehterov, Danail Minchev, Maria Gevezova, Victoria Sarafian, Michael Maes
The purpose of this review is to summarize the current knowledge regarding the reciprocal associations between brain-derived neurotrophic factor (BDNF) and immune-inflammatory pathways and how these links may explain the involvement of this neurotrophin in the immune pathophysiology of mood disorders and schizophrenia. Toward this end, we delineated the protein-protein interaction (PPI) network centered around BDNF and searched PubMed, Scopus, Google Scholar, and Science Direct for papers dealing with the involvement of BDNF in the major psychosis, neurodevelopment, neuronal functions, and immune-inflammatory and related pathways...
August 2022: Molecular Neurobiology
https://read.qxmd.com/read/34665391/knock-down-of-cd24-in-astrocytes-aggravates-oxyhemoglobin-induced-hippocampal-neuron-impairment
#11
JOURNAL ARTICLE
Chen Xiang-Xin, Tao Tao, Gao Sen, Wang Han, Zhou Xiao-Ming, Gao Yong-Yue, Hang Chun-Hua, Li Wei
Subarachnoid hemorrhage (SAH), as one of the most severe hemorrhagic strokes, is closely related to neuronal damage. Neurogenesis is a promising therapy, however, reliable targets are currently lacking. Increasing evidence has indicated that CD24 is associated with the growth of hippocampal neurons and the regulation of neural stem/precursor cell proliferation. To investigate the potential effect of CD24 in astrocytes on neuron growth in the hippocampus, we used a Transwell co-culture system of hippocampal astrocytes and neurons, and oxyhemoglobin (OxyHb) was added to the culture medium to mimic SAH in vitro...
October 19, 2021: Neurochemical Research
https://read.qxmd.com/read/34624297/in-vivo-profiling-of-the-alk-proximitome-in-the-developing-drosophila-brain
#12
JOURNAL ARTICLE
Ezgi Uçkun, Georg Wolfstetter, Vimala Anthonydhason, Sanjay Kumar Sukumar, Ganesh Umapathy, Linnea Molander, Johannes Fuchs, Ruth H Palmer
Anaplastic lymphoma kinase (Alk) is an evolutionary conserved receptor tyrosine kinase belonging to the insulin receptor superfamily. In addition to its well-studied role in cancer, numerous studies have revealed that Alk-signaling is associated with a variety of complex traits such as: regulation of growth and metabolism, hibernation, regulation of neurotransmitters, synaptic coupling, axon targeting, decision making, memory formation and learning, alcohol use disorder, as well as steroid hormone metabolism...
October 5, 2021: Journal of Molecular Biology
https://read.qxmd.com/read/34346503/clinical-variability-of-neurofibromatosis-1-a-modifying-role-of-cooccurring-ptpn11-variants-and-atypical-brain-mri-findings
#13
JOURNAL ARTICLE
Alessandra D'Amico, Carmen Rosano, Luca Pannone, Valentina Pinna, Antonia Assunto, Marialetizia Motta, Lorenzo Ugga, Paola Daniele, Roberta Mandile, Lucio Mariniello, Maria Anna Siano, Claudia Santoro, Giulio Piluso, Simone Martinelli, Pietro Strisciuglio, Alessandro De Luca, Marco Tartaglia, Daniela Melis
Neurofibromatosis 1 (NF1) is a disorder characterized by variable expressivity caused by loss-of-function variants in NF1, encoding neurofibromin, a protein negatively controlling RAS signaling. We evaluated whether concurrent variation in proteins functionally linked to neurofibromin contribute to the variable expressivity of NF1. Parallel sequencing of a RASopathy gene panel in 138 individuals with molecularly confirmed clinical diagnosis of NF1 identified missense variants in PTPN11, encoding SHP2, a positive regulator of RAS signaling, in four subjects from three unrelated families...
August 4, 2021: Clinical Genetics
https://read.qxmd.com/read/34237430/protein-tyrosine-phosphatase-shp2-positively-regulates-cold-stress-induced-tyrosine-phosphorylation-of-sirp%C3%AE-in-neurons
#14
JOURNAL ARTICLE
Daiki Jingu, Mika Iino, Joji Kawasaki, Eriko Urano, Shinya Kusakari, Yuriko Hayashi, Takashi Matozaki, Hiroshi Ohnishi
The membrane protein SIRPα is a cold stress-responsive signaling molecule in neurons. Cold stress directly induces tyrosine phosphorylation of SIRPα in its cytoplasmic region, and phosphorylated SIRPα is involved in regulating experience-dependent behavioral changes in mice. Here, we examined the mechanism of cold stress-induced SIRPα phosphorylation in vitro and in vivo. The levels of activated Src family protein tyrosine kinases (SFKs), which phosphorylate SIRPα, were not increased by lowering the temperature in cultured neurons...
July 5, 2021: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/33727228/alterations-in-the-global-proteome-and-phosphoproteome-in-third-generation-egfr-tki-resistance-reveal-drug-targets-to-circumvent-resistance
#15
JOURNAL ARTICLE
Xu Zhang, Tapan K Maity, Karen E Ross, Yue Qi, Constance M Cultraro, Meriam Bahta, Stephanie Pitts, Meghana Keswani, Shaojian Gao, Khoa Dang P Nguyen, Julie Cowart, Fatos Kirkali, Cathy Wu, Udayan Guha
Lung cancer is the leading cause of cancer mortality worldwide. The treatment of lung cancer patients harboring mutant EGFR with orally administered EGFR tyrosine kinase inhibitors (TKIs) has been a paradigm shift. Osimertinib and rociletinib are third-generation irreversible EGFR TKIs targeting the EGFR T790M mutation. Osimertinib is the current standard of care for patients with EGFR mutations due to increased efficacy, lower side effects, and enhanced brain penetrance. Unfortunately, all patients develop resistance...
March 16, 2021: Cancer Research
https://read.qxmd.com/read/33194038/elevated-hippocampal-cd24-in-astrocytes-participates-in-neural-regeneration-possibly-via-activating-shp2-erk-pathway-after-experimental-traumatic-brain-injury-in-mice
#16
JOURNAL ARTICLE
Xuan Gao, Han Wang, Yong-Yue Gao, Xiao-Ming Zhou, Tao Tao, Guang-Jie Liu, Yan Zhou, Wei Li, Chun-Hua Hang
Massive neuron loss is the key reason for poor prognoses in patients with traumatic brain injury (TBI), and astrocytes function as nutrition-providing neurons. Therefore, researchers must determine the potential role of astrocytes in neural regeneration after TBI. Our previous studies established that upregulating CD24 in the hippocampus might improve cognitive functions after TBI. However, whether CD24 in hippocampal astrocytes is involved in neural regeneration after TBI remains unknown. Therefore, we detected the CD24 expression in the ipsilateral hippocampus via western blot and quantitative real-time PCR...
2020: American Journal of Translational Research
https://read.qxmd.com/read/31787068/design-potential-selective-inhibitors-for-human-leukocyte-common-antigen-related-ptp-lar-with-fragment-replace-approach
#17
JOURNAL ARTICLE
Jing-Wei Wu, Huan Zhang, Wei-Ya Li, Xue Tang, Hong-Lian Li, Xin-Hua Lu, Zhi-Hui Zheng, Ying Ma, Run-Ling Wang
The overexpression of PTP-LAR could cause the insulin resistance, so PTP-LAR might be a promising target for treating diabetes. In this study, we applied the computer modeling methods with fragment replace approach to screen the fragment database by targeting PTP domain and site B with the aim to discover potent and selective PTP-LAR inhibitors. A series of novel 4-thiazolidone derivatives were gained. The results of their ADMET predictions indicated that these new compounds might become drug candidates. The series of these derivatives were synthesized...
December 2, 2019: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/31600500/in-vivo-crispr-screen-identifies-tgwip-as-a-toxoplasma-modulator-of-dendritic-cell-migration
#18
JOURNAL ARTICLE
Lamba Omar Sangaré, Einar B Ólafsson, Yifan Wang, Ninghan Yang, Lindsay Julien, Ana Camejo, Patricia Pesavento, Saima M Sidik, Sebastian Lourido, Antonio Barragan, Jeroen P J Saeij
Toxoplasma can reach distant organs, especially the brain, leading to a lifelong chronic phase. However, genes involved in related in vivo processes are currently unknown. Here, we use focused CRISPR libraries to identify Toxoplasma genes that affect in vivo fitness. We focus on TgWIP, whose deletion affects Toxoplasma dissemination to distant organs. We show that TgWIP is secreted into the host cell upon invasion and interacts with the host WAVE regulatory complex and SHP2 phosphatase, both of which regulate actin dynamics...
October 9, 2019: Cell Host & Microbe
https://read.qxmd.com/read/31201283/tau-interacts-with-shp2-in-neuronal-systems-and-in-alzheimer-s-disease
#19
JOURNAL ARTICLE
Yohan Kim, Guanghao Liu, Chad J Leugers, Joseph D Mueller, Meghan B Francis, Marco M Hefti, Julie A Schneider, Gloria Lee
Microtubule-associated protein tau, an integral component of neurofibrillary tangles, interacts with a variety of signaling molecules. Previously, our laboratory reported that NGF-induced MAPK activation in a PC12-derived cell line was potentiated by tau, with phosphorylation at T231 being required. Therefore, we sought to identify a signaling molecule involved in the NGF Ras-MAPK pathway that interacted with phospho-T231-tau. Here, we report that the protein tyrosine phosphatase SHP2 interacted with tau, with phospho-T231 significantly enhancing the interaction...
June 14, 2019: Journal of Cell Science
https://read.qxmd.com/read/28328117/noonan-syndrome-ptpn11-mutations-and-brain-tumors-a-clinical-report-and-review-of-the-literature
#20
REVIEW
Aurore Siegfried, Claude Cances, Marie Denuelle, Najat Loukh, Maïté Tauber, Hélène Cavé, Marie-Bernadette Delisle
Noonan syndrome (NS), an autosomal dominant disorder, is characterized by short stature, congenital heart defects, developmental delay, and facial dysmorphism. PTPN11 mutations are the most common cause of NS. PTPN11 encodes a non-receptor protein tyrosine phosphatase, SHP2. Hematopoietic malignancies and solid tumors are associated with NS. Among solid tumors, brain tumors have been described in children and young adults but remain rather rare. We report a 16-year-old boy with PTPN11-related NS who, at the age of 12, was incidentally found to have a left temporal lobe brain tumor and a cystic lesion in the right thalamus...
April 2017: American Journal of Medical Genetics. Part A
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