keyword
https://read.qxmd.com/read/38688031/intermolecular-interactions-between-cysteine-and-aromatic-amino-acids-with-a-phenyl-moiety-in-the-dna-binding-domain-of-heat-shock-factor-1-regulate-thermal-stress-induced-trimerization
#1
JOURNAL ARTICLE
Chang-Ju Lee, Bo-Hee Choi, So-Sun Kim, David Nahm-Joon Kim, Tae-Hwan Kim, Jeong-Mo Choi, Youngshang Pak, Jang-Su Park
In this study, we investigated the trimerization mechanism and structure of heat shock factor 1 (HSF1) using western blotting, tryptophan (Trp) fluorescence spectroscopy, and molecular modeling. First, we examined the DNA-binding domains of human ( Homo sapiens ), goldfish ( Carassius auratus ), and walleye pollock ( Gadus chalcogrammus ) HSF1s by mutating key residues (36 and 103) that are thought to directly affect trimer formation. Human, goldfish, and walleye pollock HSF1s contain cysteine at residue 36 but cysteine (C), tyrosine (Y), and phenylalanine (F), respectively, at residue 103...
April 30, 2024: Biochemistry
https://read.qxmd.com/read/38687970/site-specific-photochemistry-along-a-protonated-peptide-scaffold
#2
JOURNAL ARTICLE
Casey D Foley, Chin Lee, Ali Abou Taka, Kendrew Au, Etienne Chollet, Matthew A Kubasik, Laura M McCaslin, Timothy S Zwier
We present a detailed study of the time-dependent photophysics and photochemistry of a known conformation of the two protonated pentapeptides Leu-enkephalin (Tyrosine-Glycine-Glycine-Phenylalanine-Leucine, YGGFL) and its chromophore-swapped analogue FGGYL, carried out under cryo-cooled conditions in the gas phase. Using ultraviolet-infrared (UV-IR) double resonance, we record excited state IR spectra as a function of time delay between UV and IR pulses. We identify unique Tyr OH stretch transitions due to the S1 state and the vibrationally excited triplet state(s) formed by intersystem crossing, T n (v)...
April 30, 2024: Journal of the American Chemical Society
https://read.qxmd.com/read/38687937/outcomes-responses-and-prognostic-analyses-of-intrathecal-combined-treatment-for-leptomeningeal-metastasis-from-lung-adenocarcinoma
#3
JOURNAL ARTICLE
Sijie Huang, Xun Kang, Ce Wang, Weichunbai Zhang, Jing Jiang, Zhuang Kang, Shoubo Yang, Jinyi Chen, Feng Chen, Wenbin Li
BACKGROUND: Leptomeningeal metastasis (LM) is a severe lung cancer complication, with potentially fatal consequences. The use of intrathecal therapy (IT) combined with systemic therapy has shown promise as a treatment approach for LM. Thus, this study aimed to evaluate the features and responses to IT combined therapy and identify determinants affecting patients with leptomeningeal metastasis resulting from lung adenocarcinoma (LM-LA). METHODS: A retrospective analysis of medical records from our hospital database was performed, covering from April 2018 to August 2022, for 37 patients diagnosed with LM-LA and treated with IT combined therapy...
April 1, 2024: Journal of Cancer Research and Therapeutics
https://read.qxmd.com/read/38687678/loss-of-tumor-suppressor-tmem127-drives-ret-mediated-transformation-through-disrupted-membrane-dynamics
#4
JOURNAL ARTICLE
Timothy J Walker, Eduardo Reyes-Alvarez, Brandy D Hyndman, Michael G Sugiyama, Larissa C B Oliveira, Aisha N Rekab, Mathieu J F Crupi, Rebecca Cabral-Dias, Qianjin Guo, Patricia L M Dahia, Douglas S Richardson, Costin N Antonescu, Lois M Mulligan
Internalization from the cell membrane and endosomal trafficking of receptor tyrosine kinases (RTKs) are important regulators of signaling in normal cells that can frequently be disrupted in cancer. The adrenal tumor pheochromocytoma (PCC) can be caused by activating mutations of the rearranged during transfection (RET) receptor tyrosine kinase, or inactivation of TMEM127, a transmembrane tumor suppressor implicated in trafficking of endosomal cargos. However, the role of aberrant receptor trafficking in PCC is not well understood...
April 30, 2024: ELife
https://read.qxmd.com/read/38687242/interaction-of-au-iii-with-amino-acids-a-vade-mecum-for-medicinal-chemistry-and-nanotechnology
#5
JOURNAL ARTICLE
Edoardo Jun Mattioli, Beatrice Cipriani, Francesco Zerbetto, Tainah Dorina Marforio, Matteo Calvaresi
Au(III) is highly reactive. At odds with its reduced counterpart, Au(I), it is hardly present in structural databases. And yet, it is the starting reactant to form gold nanoclusters (AuNCs) and the constitutive component of a new class of drugs. Its reactivity is a world apart from that of the iso-electronic Pt(II) species. Rather than DNA, it targets proteins. Its interaction with amino acid residues is manifold. It can strongly interact with the residue backbones, amino acid side chains and protein ends, it can form appropriate complexes whose stabilization energy reaches up to more than 40 kcal mol-1 , it can affect the p K a of amino acid residues, and it can promote charge transfer from the residues to the amount that it is reduced...
April 30, 2024: Journal of Materials Chemistry. B, Materials for Biology and Medicine
https://read.qxmd.com/read/38687198/novel-spirocyclic-dimer-spid3-targets-chronic-lymphocytic-leukemia-survival-pathways-with-potent-preclinical-effects
#6
JOURNAL ARTICLE
Alexandria P Eiken, Audrey L Smith, Sydney A Skupa, Elizabeth Schmitz, Sandeep Rana, Sarbjit Singh, Siddhartha Kumar, Jayapal Reddy Mallareddy, Aguirre A de Cubas, Akshay Krishna, Achyuth Kalluchi, M Jordan Rowley, Christopher R D'Angelo, Matthew A Lunning, R Gregory Bociek, Julie M Vose, Amarnath Natarajan, Dalia El-Gamal
Chronic lymphocytic leukemia (CLL) cell survival and growth is fueled by the induction of B-cell receptor (BCR) signaling within the tumor microenvironment (TME) driving activation of NF-κB signaling and the unfolded protein response (UPR). Malignant cells have higher basal levels of UPR posing a unique therapeutic window to combat CLL cell growth using pharmacological agents that induce accumulation of misfolded proteins. Frontline CLL therapeutics that directly target BCR signaling such as Bruton-tyrosine kinase (BTK) inhibitors (e...
April 30, 2024: Cancer Res Commun
https://read.qxmd.com/read/38687127/multifunctional-amino-acid-derivative-coordination-compounds-novel-contrast-agent-and-luminescence-materials
#7
JOURNAL ARTICLE
Estitxu Echenique-Errandonea, Sara Rojas, Ana M Ortuño, Javier Cepeda, Pedro Ramos-Cabrer, Íñigo J Vitórica-Yrezábal, Juan M Cuerva, José M Seco, Antonio Rodríguez-Diéguez
In this work a family of multidimensional (2-(1H-tetrazol-5-yl)ethyl) amino acid coordination compounds have been synthesized and thoroughly characterized. For this purpose, glycine, valine, phenylalanine and tyrosine have been selected as starting amino acids and Mn2+ , Zn2+ and Cd2+ as metallic nodes. From one side, for Mn2+ based dimer magnetic resonance imaging studies have been conducted, prompted by the number and disposition of the coordinated water molecules and taking into consideration the promising future of manganese-based coordination compounds as bio-compatible substitutes to conventional Gd based contrast agents...
April 30, 2024: Chemistry: a European Journal
https://read.qxmd.com/read/38686714/-detection-and-significance-of-molecular-markers-in-immunotherapy-and-targeted-therapy-of-colorectal-cancer-in-tibet
#8
JOURNAL ARTICLE
Han-Huan Luo, Bin-Yun Liu, Zhen Huo, BIANbazhaxi, Qian Wang, DUObula, NImazhuoma, Zhen DA, Han Wang, Ping-Ping Guo
Objective To study the expression of SWI/SNF-related,matrix-associated,actin-dependent regulator of chromatin,subfamily A,member 4(SMARCA4)/Brahma-related gene 1,V-raf murine sarcoma viral oncogene homolog B(BRAF),P53,programmed cell death protein-1(PD-1),and programmed death-ligand 1(PD-L1),and changes in the expression of BRAF and neurotrophic tyrosine receptor kinase(NTRK) in the patients with colorectal cancer in Tibet,thereby providing a basis for targeted therapy and immunotherapy for this disease in Tibet...
April 2024: Zhongguo Yi Xue Ke Xue Yuan Xue Bao. Acta Academiae Medicinae Sinicae
https://read.qxmd.com/read/38686299/non-thermal-plasma-modulated-l-tyrosine-self-assemblies-a-potential-avenue-for-fabrication-of-supramolecular-self-assembled-biomaterials
#9
JOURNAL ARTICLE
Priya Bhatt, Prajakta Sharad Garad, V V S Prasanna Kumari Rayala, P Radhakrishnanand, Kamatchi Sankaranarayanan
Aromatic amino acids (AAs) have garnered particular interest due to their pivotal roles in numerous biological processes and disorders. Variations in AA self-assembly not only affect protein structures and functions, but their non-covalent interactions such as hydrogen bonding, van der Waals forces, and π-π stacking, yield versatile assemblies vital in bio-inspired material fabrication. Tyrosine (Tyr), a non-essential aromatic amino acid, holds multifaceted significance in the body as a protein building block, neurotransmitter precursor, thyroid hormone contributor, and melanin synthesis regulator...
April 25, 2024: RSC Advances
https://read.qxmd.com/read/38686189/role-of-spry4-in-health-and-disease
#10
REVIEW
Hao Pan, Renjie Xu, Yong Zhang
SPRY4 is a protein encoding gene that belongs to the Spry family. It inhibits the mitogen-activated protein kinase (MAPK) signaling pathway and plays a role in various biological functions under normal and pathological conditions. The SPRY4 protein has a specific structure and interacts with other molecules to regulate cellular behavior. It serves as a negative feedback inhibitor of the receptor protein tyrosine kinases (RTK) signaling pathway and interferes with cell proliferation and migration. SPRY4 also influences inflammation, oxidative stress, and cell apoptosis...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38686058/a-review-on-potential-heterocycles-for-the-treatment-of-glioblastoma-targeting-receptor-tyrosine-kinases
#11
REVIEW
Nilam Bhusare, Maushmi Kumar
Glioblastoma, the most aggressive form of brain tumor, poses significant challenges in terms of treatment success and patient survival. Current treatment modalities for glioblastoma include radiation therapy, surgical intervention, and chemotherapy. Unfortunately, the median survival rate remains dishearteningly low at 12-15 months. One of the major obstacles in treating glioblastoma is the recurrence of tumors, making chemotherapy the primary approach for secondary glioma patients. However, the efficacy of drugs is hampered by the presence of the blood-brain barrier and multidrug resistance mechanisms...
2024: Oncology Research
https://read.qxmd.com/read/38685983/the-butterfly-flies-practice-changing-results-of-papillon-first-line-chemotherapy-and-amivantamab-for-the-treatment-of-nsclc-patients-with-egfr-exon-20-insertions
#12
JOURNAL ARTICLE
Dalia Kaakour, Misako Nagasaka
Epidermal growth factor receptor (EGFR) exon 20 insertions are a rare subtype of EGFR mutations that do not respond to EGFR tyrosine kinase inhibitors developed for sensitizing mutations. In 2021, two drugs, amivantamab and mobocertinib each received FDA accelerated approval for second line use after platinum based therapy. These drugs were then brought to first line setting clinical trials; PAPILLON and EXCLAIM2. PAPILLON, which compared amivantamab plus chemotherapy to chemotherapy was positive, whereas EXCLAIM2, which compared mobocertinib to chemotherapy was negative...
2024: Lung Cancer: Targets and Therapy
https://read.qxmd.com/read/38685879/integrated-non-targeted-metabolomics-and-transcriptomics-reveals-the-browning-mechanism-of-scraped-ginger-zingiber-officinale-rosc
#13
JOURNAL ARTICLE
Moru Tong, Yangfei Ding, Hao Yu, Wei Zhang, Deling Wu
Ginger (Zingiber officinale Rosc.) possesses a rich nutritional profile, making it a valuable ingredient for a wide range of culinary applications. After removing its outer skin, ginger can be effectively utilized in the production of pickles and other processed food products. However, following scraping, ginger undergoes a series of physiological and biochemical changes during storage, which can impact its subsequent development and utilization in food. Thus, the current study aimed to investigate the browning mechanism of scraped ginger using non-targeted metabolomics and transcriptomics...
April 30, 2024: Journal of Food Science
https://read.qxmd.com/read/38685567/effect-of-pressure-on-the-conformational-landscape-of-human-%C3%AE-d-crystallin-from-replica-exchange-molecular-dynamics-simulations
#14
JOURNAL ARTICLE
Arlind Kacirani, Betül Uralcan, Tiago S Domingues, Amir Haji-Akbari
Human γD-crystallin belongs to a crucial family of proteins known as crystallins located in the fiber cells of the human lens. Since crystallins do not undergo any turnover after birth, they need to possess remarkable thermodynamic stability. However, their sporadic misfolding and aggregation, triggered by environmental perturbations or genetic mutations, constitute the molecular basis of cataracts, which is the primary cause of blindness in the globe according to the World Health Organization. Here, we investigate the impact of high pressure on the conformational landscape of wild-type HγD-crystallin using replica exchange molecular dynamics simulations augmented with principal component analysis...
April 29, 2024: Journal of Physical Chemistry. B
https://read.qxmd.com/read/38685399/axl-receptor-as-an-emerging-molecular-target-in-colorectal-cancer
#15
REVIEW
Lucia De Rosa, Rossella Di Stasi, Virginia Fusco, Luca D D'Andrea
AXL receptor tyrosine kinase (AXL) is a receptor tyrosine kinase whose aberrant expression has recently been associated with colorectal cancer (CRC), contributing to tumor growth, epithelial-mesenchymal transition (EMT), increased invasiveness, metastatic spreading, and the development of drug resistance. In this review we summarize preclinical data, the majority of which are limited to recent years, convincingly linking the AXL receptor to CRC. These findings support the value of targeting AXL with molecules in drug discovery, offering novel and advanced therapeutic or diagnostic tools for CRC management...
April 27, 2024: Drug Discovery Today
https://read.qxmd.com/read/38685282/targeting-focal-adhesion-kinase-fak-for-cancer-therapy-fak-inhibitors-fak-based-dual-target-inhibitors-and-protac-degraders
#16
REVIEW
Ming Yang, Hua Xiang, Guoshun Luo
Focal adhesion kinase (FAK), a non-receptor tyrosine kinase, plays an essential role in regulating cell proliferation, migration and invasion through both kinase-dependent enzymatic function and kinase-independent scaffolding function. The overexpression and activation of FAK is commonly observed in various cancers and some drug-resistant settings. Therefore, targeted disruption of FAK has been identified as an attractive strategy for cancer treatment. To date, numerous structurally diverse inhibitors targeting distinct domains of FAK have been developed, encompassing kinase domain inhibitors, FERM domain inhibitors, and FAT domain inhibitors, with several FAK inhibitors advanced to clinical trials...
April 27, 2024: Biochemical Pharmacology
https://read.qxmd.com/read/38685222/insights-into-interaction-of-triazine-herbicides-with-three-kinds-of-different-alkyl-groups-simetryne-ametryn-and-terbutryn-with-human-serum-albumin-via-multi-spectral-analysis
#17
JOURNAL ARTICLE
Ying Yang, Wenhui Han, Honglu Zhang, Heng Qiao, Yongcai Zhang, Zhaohong Zhang, Jun Wang
In this study, the interaction of triazine herbicides with three kinds of different alkyl groups (simetryne, ametryn and terbutryn) with human serum albumin (HSA) are investigated through UV-vis, fluorescence, and circular dichroism (CD) spectra. The mechanisms on the fluorescence quenching of HSA initiated by triazine herbicides are obtained using Stern-Volmer, Lineweaver-Burk and Double logarithm equations. The quenching rate constant (Kq ), Stern-Volmer quenching constant (Ksv ), binding constant (KA ), thermodynamic parameters such as enthalpy change (∆H), entropy change (∆S) and Gibbs free energy (∆G) and number of binding site (n) are calculated and compared...
May 2024: Pesticide Biochemistry and Physiology
https://read.qxmd.com/read/38684750/preclinical-evaluation-of-novel-synthesised-nanoparticles-based-on-tyrosine-poly-ester-amide-for-improved-targeted-pulmonary-delivery
#18
JOURNAL ARTICLE
Eman Zmaily Dahmash, Nour Radwan Achkar, Dalia Khalil Ali, Qais Jarrar, Affiong Iyire, Shereen M Assaf, Hamad Alyami
Fixed dose combinations (FDCs) incorporating two or three medicines in a single inhaler have been created to enhance patient compliance and hence clinical outcomes. However, the development of dry powder inhalers (DPIs), particularly for FDCs, faces challenges pertinent to formulation uniformity and reproducibility. Therefore, this project aimed to employ nanotechnology to develop a FDC of DPIs for market-leading medicines-fluticasone propionate (FP) and salmeterol xinafoate (SAL)-for asthma management. Nanoaggregates were prepared using a novel biocompatible and biodegradable poly(ester amide) based on the amino acid tyrosine, utilising a one-step interfacial polymerisation process...
April 29, 2024: Scientific Reports
https://read.qxmd.com/read/38684555/mentalis-nerve-branches-supplying-the-lower-lip-revisited-a-study-of-human-fetuses-and-donated-elderly-cadavers
#19
JOURNAL ARTICLE
Kwang Ho Cho, Yuki Sugiyama, Genji Watanabe, Hidetomo Hirouchi, Gen Murakami, Jose Francisco Rodríguez-Vázquez, Shin-Ichi Abe
PURPOSE: Little information is known about the mentalis nerve course from the lower lip approximation margin (free margin) to the upper lip. Likewise, no difference in nerve distribution has been observed between the cutaneous and mucosal parts of the lip. Therefore, this study reexamined mentalis nerve morphology. METHODS: For macroscopic observations, three fresh cadavers were dissected (one male and two females; aged 78-93). We also evaluated histological sections obtained from five donated elderly cadavers (two males and three females, aged 82-96 years) and 15 human fetuses (11-40 weeks or crown-rump length 80-372 mm)...
April 29, 2024: Surgical and Radiologic Anatomy: SRA
https://read.qxmd.com/read/38684432/-acute-myeloid-leukemia-with-central-nervous-system-involvement-successfully-treated-with-gilteritinib
#20
JOURNAL ARTICLE
Gentaro Koyama, Takeharu Kawaguchi, Takumi Sato, Chihiro Hamada, Satoru Hara
A 69-year-old woman was referred to our hospital due to hyperleukocytosis. We diagnosed acute myeloid leukemia and started induction therapy with the CAG regimen (aclarubicin, cytarabine and filgrastim). However, the patient was refractory to the initial treatment and developed quadriplegia, and a cerebrospinal fluid (CSF) test showed elevated blasts. We then performed intrathecal chemotherapy, and the number of blasts in CSF gradually decreased. But only two cycles of intrathecal therapy were possible due to severe methotrexate-induced mucositis...
2024: [Rinshō Ketsueki] the Japanese Journal of Clinical Hematology
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