keyword
https://read.qxmd.com/read/38352417/casein-kinase-1-controls-components-of-a-torc2-signaling-network-in-budding-yeast
#1
Rafael Lucena, Akshi Jasani, Steph Anastasia, Douglas Kellogg, Maria Alcaide-Gavilan
Tor kinases play diverse and essential roles in control of nutrient signaling and cell growth. Tor kinases are assembled into two large multiprotein complexes referred to as Tor Complex 1 and Tor Complex 2 (TORC1 and TORC2). In budding yeast, TORC2 controls a signaling network that relays signals regarding carbon source that strongly influence growth rate and cell size. However, the mechanisms that control TORC2 signaling are poorly understood. Activation of TORC2 requires Mss4, a phosphoinositol kinase that initiates assembly of a multi-protein complex at the plasma membrane that recruits and activates downstream targets of TORC2...
January 31, 2024: bioRxiv
https://read.qxmd.com/read/37375195/novel-effect-of-p-coumaric-acid-on-hepatic-lipolysis-inhibition-of-hepatic-lipid-droplets
#2
JOURNAL ARTICLE
Zhiyi Yuan, Xi Lu, Fan Lei, Hong Sun, Jingfei Jiang, Dongming Xing, Lijun Du
p -coumaric acid ( p -CA), a common plant phenolic acid with multiple bioactivities, has a lipid-lowering effect. As a dietary polyphenol, its low toxicity, with the advantages of prophylactic and long-term administration, makes it a potential drug for prophylaxis and the treatment of nonalcoholic fatty liver disease (NAFLD). However, the mechanism by which it regulates lipid metabolism is still unclear. In this study, we studied the effect of p -CA on the down-regulation of accumulated lipids in vivo and in vitro...
June 8, 2023: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/36857169/recruitment-of-the-lipid-kinase-mss4-to-the-meiotic-spindle-pole-promotes-prospore-membrane-formation-in-saccharomyces-cerevisiae
#3
JOURNAL ARTICLE
Greisly Nunez, Kai Zhang, Kaveh Mogbheli, Nancy M Hollingsworth, Aaron M Neiman
Spore formation in the budding yeast, Saccharomyces cerevisiae , involves de novo creation of four prospore membranes, each of which surrounds a haploid nucleus resulting from meiosis. The meiotic outer plaque (MOP) is a meiosis-specific protein complex associated with each meiosis II spindle pole body (SPB). Vesicle fusion on the MOP surface creates an initial prospore membrane anchored to the SPB. Ady4 is a meiosis-specific MOP component that stabilizes the MOP-prospore membrane interaction. We show that Ady4 recruits the lipid kinase, Mss4, to the MOP...
March 1, 2023: Molecular Biology of the Cell
https://read.qxmd.com/read/35953758/translationally-controlled-tumor-protein-the-mediator-promoting-cancer-invasion-and-migration-and-its-potential-clinical-prospects
#4
REVIEW
Junying Gao, Yan Ma, Guiwen Yang, Guorong Li
Translationally controlled tumor protein (TCTP) is a highly conserved multifunctional protein localized in the cytoplasm and nucleus of eukaryotic cells. It is secreted through exosomes and its degradation is associated with the ubiquitin-proteasome system (UPS), heat shock protein 27 (Hsp27), and chaperone-mediated autophagy (CMA). Its structure contains three α‍-helices and eleven β‍-strands, and features a helical hairpin as its hallmark. TCTP shows a remarkable similarity to the methionine-R-sulfoxide reductase B (MsrB) and mammalian suppressor of Sec4 (Mss4/Dss4) protein families, which exerts guanine nucleotide exchange factor (GEF) activity on small guanosine triphosphatase (GTPase) proteins, suggesting that some functions of TCTP may at least depend on its GEF action...
August 15, 2022: Journal of Zhejiang University. Science. B
https://read.qxmd.com/read/35767331/stratum-is-required-for-both-apical-and-basolateral-transport-through-stable-expression-of-rab10-and-rab35-in-drosophila-photoreceptors
#5
JOURNAL ARTICLE
Yuka Ochi, Hitomi Yamashita, Yumi Yamada, Takunori Satoh, Akiko K Satoh
Post-Golgi transport for specific membrane domains, also termed polarized transport, is essential for the construction and maintenance of polarized cells. Highly polarized Drosophila photoreceptors serve as a good model system for studying the mechanisms underlying polarized transport. The Mss4 Drosophila ortholog, Stratum (Strat), controls basal restriction of basement membrane proteins in follicle cells, and Rab8 acts downstream of Strat. We investigated the function of Strat in fly photoreceptors and found that polarized transport in both the basolateral and the rhabdomere membrane domains was inhibited in Strat -deficient photoreceptors...
September 1, 2022: Molecular Biology of the Cell
https://read.qxmd.com/read/33540684/analysis-of-m6a-rna-methylation-related-genes-in-liver-hepatocellular-carcinoma-and-their-correlation-with-survival
#6
JOURNAL ARTICLE
Yong Li, Dandan Qi, Baoli Zhu, Xin Ye
N6-methyladenosine (m6A) modification on RNA plays an important role in tumorigenesis and metastasis, which could change gene expression and even function at multiple levels such as RNA splicing, stability, translocation, and translation. In this study, we aim to conduct a comprehensive analysis on m6A RNA methylation-related genes, including m6A RNA methylation regulators and m6A RNA methylation-modified genes, in liver hepatocellular carcinoma, and their relationship with survival and clinical features. Data, which consist of the expression of widely reported m6A RNA methylation-related genes in liver hepatocellular carcinoma from The Cancer Genome Atlas (TCGA), were analyzed by one-way ANOVA, Univariate Cox regression, a protein-protein interaction network, gene enrichment analysis, feature screening, a risk prognostic model, correlation analysis, and consensus clustering analysis...
February 2, 2021: International Journal of Molecular Sciences
https://read.qxmd.com/read/32805410/the-crystal-structure-of-protein-transporting-chaperone-bcp1-from-saccharomyces-cerevisiae
#7
JOURNAL ARTICLE
Meng-Hsuan Lin, Po-Chih Kuo, Yi-Chih Chiu, Yu-Ying Chang, Sheng-Chia Chen, Chun-Hua Hsu
BCP1 is a protein enriched in the nucleus that is required for Mss4 nuclear export and identified as the chaperone of ribosomal protein Rpl23 in Saccharomyces cerevisiae. According to sequence homology, BCP1 is related to the mammalian BRCA2-interacting protein BCCIP and belongs to the BCIP protein family (PF13862) in the Pfam database. However, the BCIP family has no discernible similarity to proteins with known structure. Here, we report the crystal structure of BCP1, presenting an α/β fold in which the central antiparallel β-sheet is flanked by helices...
August 14, 2020: Journal of Structural Biology
https://read.qxmd.com/read/31813476/the-anti-cancer-compound-schweinfurthin-a-targets-osh2-and-disrupts-lipid-metabolism-in-the-yeast-model
#8
JOURNAL ARTICLE
Behrooz Moosavi, Mengqi Gao, Xiao-Lei Zhu, Guang-Fu Yang
Schweinfurthin A (Sch A) is a natural product with a selective and strong anti-cancer effect. Although it is known to target oxysterol binding proteins, the detailed mode of action is not well understood. Here, we provide strong evidence that yeast cells can be used as a eukaryotic model system to decipher the molecular modes of Sch A. We show that Sch A (100 µM) targets Osh2 (a yeast oxysterol binding protein homolog) genetically and taking advantage of computational chemistry indicate that the tetrahydro-2H-xanthene portion of Sch A forms H-bonds with residues Ser105, Val113, and Lys201, while its isoprenoid side chain is placed in a hydrophobic pocket lined by the side chains of Leu41, Leu45, Leu58, Met56, and Phe174 in Osh2...
November 25, 2019: Bioorganic Chemistry
https://read.qxmd.com/read/31339948/sopf-a-phosphoinositide-binding-effector-promotes-the-stability-of-the-nascent-salmonella-containing-vacuole
#9
JOURNAL ARTICLE
Nicole Lau, Amanda L Haeberle, Brittany J O'Keeffe, Eleanor A Latomanski, Jean Celli, Hayley J Newton, Leigh A Knodler
The enteric bacterial pathogen Salmonella enterica serovar Typhimurium (S. Typhimurium), utilizes two type III secretion systems (T3SSs) to invade host cells, survive and replicate intracellularly. T3SS1 and its dedicated effector proteins are required for bacterial entry into non-phagocytic cells and establishment and trafficking of the nascent Salmonella-containing vacuole (SCV). Here we identify the first T3SS1 effector required to maintain the integrity of the nascent SCV as SopF. SopF associates with host cell membranes, either when translocated by bacteria or ectopically expressed...
July 24, 2019: PLoS Pathogens
https://read.qxmd.com/read/29149411/elusive-role-of-tctp-protein-and-mrna-in-cell-cycle-and-cytoskeleton-regulation
#10
JOURNAL ARTICLE
Jacek Z Kubiak, Malgorzata Kloc
Translationally Controlled Tumor-associated Protein (TCTP) is a small, 23 kDa multifunctional and ubiquitous protein localized both in the cytoplasm and in the nucleus of eukaryotic cells. It is evolutionarily highly conserved. Certain aspects of its structure show remarkable similarities to guanine nucleotide-free chaperons Mss4 and Dss4 suggesting that at least some functions of TCTP may depend on its chaperon-like action on other proteins. Besides other functions, TCTP is clearly involved in cell cycle regulation...
2017: Results and Problems in Cell Differentiation
https://read.qxmd.com/read/29148364/salibacterium-lacus-sp-nov-a-halophilic-non-spore-forming-bacterium-isolated-from-sediment-of-a-saline-lake
#11
JOURNAL ARTICLE
Yue-Qiang Wang, Xiao-Ming Liu, Jia Tang, Gui-Qin Yang, Zhen Yu
A novel halophilic bacterium, strain GSS13T , capable of growing at salinities of 8-28 % (w/v) NaCl (optimally at 24 %, w/v) was isolated from Yuncheng Saline Lake in China. GSS13T was Gram-stain-positive, strictly aerobic, rod-shaped, motile and a non-spore-former. Growth occurred at pH 5.5-8.5 (optimum pH 7.0) and at 10-45 °C (optimum 30 °C). On the basis of the results of 16S rRNA gene sequences phylogenetic analyses, GSS13T represents a member of the genus Salibacterium and is closely related to Salibacterium halotolerans S7T , Salibacterium qingdaonense CM1T and Salibacterium halochares MSS4T , with 16S rRNA gene sequence similarities of 98...
January 2018: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/28894007/rabif-mss4-is-a-rab-stabilizing-holdase-chaperone-required-for-glut4-exocytosis
#12
JOURNAL ARTICLE
Daniel R Gulbranson, Eric M Davis, Brittany A Demmitt, Yan Ouyang, Yihong Ye, Haijia Yu, Jingshi Shen
Rab GTPases are switched from their GDP-bound inactive conformation to a GTP-bound active state by guanine nucleotide exchange factors (GEFs). The first putative GEFs isolated for Rabs are RABIF (Rab-interacting factor)/MSS4 (mammalian suppressor of Sec4) and its yeast homolog DSS4 (dominant suppressor of Sec4). However, the biological function and molecular mechanism of these molecules remained unclear. In a genome-wide CRISPR genetic screen, we isolated RABIF as a positive regulator of exocytosis. Knockout of RABIF severely impaired insulin-stimulated GLUT4 exocytosis in adipocytes...
September 26, 2017: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/28228250/stratum-a-homolog-of-the-human-gef-mss4-partnered-with-rab8-controls-the-basal-restriction-of-basement-membrane-proteins-in-epithelial-cells
#13
JOURNAL ARTICLE
Olivier Devergne, Gina H Sun, Trudi Schüpbach
The basement membrane (BM), a sheet of extracellular matrix lining the basal side of epithelia, is essential for epithelial cell function and integrity, yet the mechanisms that control the basal restriction of BM proteins are poorly understood. In epithelial cells, a specialized pathway is dedicated to restrict the deposition of BM proteins basally. Here, we report the identification of a factor in this pathway, a homolog of the mammalian guanine nucleotide exchange factor (GEF) Mss4, which we have named Stratum...
February 21, 2017: Cell Reports
https://read.qxmd.com/read/27913624/bcp1-is-the-nuclear-chaperone-of-rpl23-in-saccharomyces-cerevisiae
#14
JOURNAL ARTICLE
Ya-Han Ting, Ting-Jun Lu, Arlen W Johnson, Jing-Ting Shie, Bo-Ru Chen, Suresh Kumar S, Kai-Yin Lo
Eukaryotic ribosomes are composed of rRNAs and ribosomal proteins. Ribosomal proteins are translated in the cytoplasm and imported into the nucleus for assembly with the rRNAs. It has been shown that chaperones or karyopherins responsible for import can maintain the stability of ribosomal proteins by neutralizing unfavorable positive charges and thus facilitate their transports. Among 79 ribosomal proteins in yeast, only a few are identified with specific chaperones. Besides the classic role in maintaining protein stability, chaperones have additional roles in transport, chaperoning the assembly site, and dissociation of ribosomal proteins from karyopherins...
January 13, 2017: Journal of Biological Chemistry
https://read.qxmd.com/read/25303613/genetic-dissection-of-the-mss4-locus-mediating-sex-biased-cancer-resistance-in-the-rat-peripheral-nervous-system
#15
JOURNAL ARTICLE
Linda van den Berg, Bernd U Koelsch, Bettina Winzen-Reichert, Christine Fischer, Andrea Kutritz, Andrea Kindler-Röhrborn
The incidence of neural tumors is sexually dimorphic in both, humans and rodents. The identification of genetic determinants contributing to sex-biased tumor development is an essential prerequisite for differential tumor prevention in males and females. F2 hybrids of inbred BDIV and BDIX rats, resistant and susceptible, respectively, to ethylnitrosourea-induced malignant peripheral nerve sheath tumors (MPNST) display a marked sex bias regarding tumor risk. Homozygous BDIV alleles at the Mss4 locus (90.9-111...
May 1, 2015: International Journal of Cancer. Journal International du Cancer
https://read.qxmd.com/read/25158853/rab8a-as160-mss4-regulatory-circuit-controls-lipid-droplet-fusion-and-growth
#16
JOURNAL ARTICLE
Lizhen Wu, Dijin Xu, Linkang Zhou, Bingxian Xie, Li Yu, Hongyuan Yang, Lei Huang, Jing Ye, Haiteng Deng, Y Adam Yuan, Shuai Chen, Peng Li
Rab GTPases, by targeting to specific membrane compartments, play essential roles in membrane trafficking. Lipid droplets (LDs) are dynamic subcellular organelles whose growth is closely linked to obesity and hepatic steatosis. Fsp27 is shown to be required for LD fusion and growth by enriching at LD-LD contact sites. Here, we identify Rab8a as a direct interactor and regulator of Fsp27 in mediating LD fusion in adipocytes. Knockdown of Rab8a in the livers of ob/ob mice results in the accumulation of smaller LDs and lower hepatic lipid levels...
August 25, 2014: Developmental Cell
https://read.qxmd.com/read/24465216/a-neurotoxic-glycerophosphocholine-impacts-ptdins-4-5-bisphosphate-and-torc2-signaling-by-altering-ceramide-biosynthesis-in-yeast
#17
JOURNAL ARTICLE
Michael A Kennedy, Kenneth Gable, Karolina Niewola-Staszkowska, Susana Abreu, Anne Johnston, Linda J Harris, Fulvio Reggiori, Robbie Loewith, Teresa Dunn, Steffany A L Bennett, Kristin Baetz
Unbiased lipidomic approaches have identified impairments in glycerophosphocholine second messenger metabolism in patients with Alzheimer's disease. Specifically, we have shown that amyloid-β42 signals the intraneuronal accumulation of PC(O-16:0/2:0) which is associated with neurotoxicity. Similar to neuronal cells, intracellular accumulation of PC(O-16:0/2:0) is also toxic to Saccharomyces cerevisiae, making yeast an excellent model to decipher the pathological effects of this lipid. We previously reported that phospholipase D, a phosphatidylinositol-4,5-bisphosphate (PtdIns(4,5)P2)-binding protein, was relocalized in response to PC(O-16:0/2:0), suggesting that this neurotoxic lipid may remodel lipid signaling networks...
January 2014: PLoS Genetics
https://read.qxmd.com/read/23781030/phosphatidylinositol-4-5-bisphosphate-is-required-for-invasive-growth-in-saccharomyces-cerevisiae
#18
JOURNAL ARTICLE
Isabelle Guillas, Aurélia Vernay, Jean-Jacques Vitagliano, Robert A Arkowitz
Phosphatidylinositol phosphates are important regulators of processes such as the cytoskeleton organization, membrane trafficking and gene transcription, which are all crucial for polarized cell growth. In particular, phosphatidylinositol 4,5-bisphosphate [PtdIns(4,5)P2] has essential roles in polarized growth as well as in cellular responses to stress. In the yeast Saccharomyces cerevisiae, the sole phosphatidylinositol-4-phosphate 5-kinase (PI4P5K) Mss4p is essential for generating plasma membrane PtdIns(4,5)P2...
August 15, 2013: Journal of Cell Science
https://read.qxmd.com/read/23122550/tpt1-tctp-regulated-pathways-in-phenotypic-reprogramming
#19
REVIEW
Robert Amson, Salvatore Pece, Jean-Christophe Marine, Pier Paolo Di Fiore, Adam Telerman
Evolutionary conserved and pleiotropic, the TPT1/TCTP gene (translationally controlled tumor protein, also called HRF, fortilin), encodes a highly structured mRNA shielded by ribonucleoproteins and closely resembling viral particles. This mRNA activates, as do viruses, protein kinase R (PKR). The TPT1/TCTP protein is structurally similar to mRNA-helicases and MSS4. TPT1/TCTP has recently been identified as a prognostic factor in breast cancer and a critical regulator of the tumor suppressor p53 and of the cancer stem cell (SC) compartment...
January 2013: Trends in Cell Biology
https://read.qxmd.com/read/23097040/the-functions-of-anionic-phospholipids-during-clathrin-mediated-endocytosis-site-initiation-and-vesicle-formation
#20
JOURNAL ARTICLE
Yidi Sun, David G Drubin
Anionic phospholipids PI(4,5)P2 and phosphatidylserine (PS) are enriched in the cytosolic leaflet of the plasma membrane where endocytic sites form. In this study, we investigated the roles of PI(4,5)P2 and PS in clathrin-mediated endocytosis (CME) site initiation and vesicle formation in Saccharomyces cerevisiae. Live-cell imaging of endocytic protein dynamics in an mss4(ts) mutant, which has severely reduced PI(4,5)P2 levels, revealed that PI(4,5)P2 is required for endocytic membrane invagination but is less important for endocytic site initiation...
December 15, 2012: Journal of Cell Science
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