keyword
https://read.qxmd.com/read/38691763/bringing-artificial-intelligence-ai-into-environmental-toxicology-studies-a-perspective-of-ai-enabled-zebrafish-high-throughput-screening
#1
REVIEW
Nan Wang, Gongqing Dong, Ruxia Qiao, Xiang Yin, Sijie Lin
The booming development of artificial intelligence (AI) has brought excitement to many research fields that could benefit from its big data analysis capability for causative relationship establishment and knowledge generation. In toxicology studies using zebrafish, the microscopic images and videos that illustrate the developmental stages, phenotypic morphologies, and animal behaviors possess great potential to facilitate rapid hazard assessment and dissection of the toxicity mechanism of environmental pollutants...
May 1, 2024: Environmental Science & Technology
https://read.qxmd.com/read/38691750/dynamically-manipulating-long-wave-infrared-polarized-thermal-radiation-by-a-vanadium-dioxide-metasurface
#2
JOURNAL ARTICLE
Qianlong Kang, Kai Guo, Xizheng Zhang, Wei Wang, Zhongyi Guo
Dynamically manipulating the spectra and polarization properties of thermal radiation is the key to counter an infrared polarization imaging system (IPIS) under the different background environments. In this Letter, we propose a phase-change metasurface thermal emitter (PCMTE) composed of vanadium dioxide (VO2 ) dipole antenna arrays to dynamically manipulate polarized radiation spectra in the long-wave infrared (LWIR) region of 8-14 µm. During the thermally induced and reversible insulator-to-metal transition (IMT) in VO2 , by simulating the LWIR images at different polarization angles for the PCMTE and background plates, the PCMTE can realize dynamically tunable LWIR camouflage; then, their degree of linear polarization (DoLP) can be calculated, which can demonstrate that the PCMTE can also achieve dynamically tunable LWIR polarization camouflage at the specific radiation angles and backgrounds...
May 1, 2024: Optics Letters
https://read.qxmd.com/read/38691726/noninvasive-holographic-imaging-through-dynamically-scattering-media
#3
JOURNAL ARTICLE
Naoki Matsuda, Jun Tanida, Makoto Naruse, Ryoichi Horisaki
We present a noninvasive method for quantitative phase imaging through dynamically scattering media. A complex amplitude object, illuminated with coherent light, is captured through a dynamically scattering medium and a variable coded aperture, without the need for interferometric measurements or imaging optics. The complex amplitude of the object is computationally retrieved from intensity images that use multiple coded aperture patterns, employing a stochastic gradient descent algorithm. We demonstrate the proposed method both numerically and experimentally...
May 1, 2024: Optics Letters
https://read.qxmd.com/read/38691681/influence-of-static-and-dynamic-ocular-aberrations-on-full-field-optical-coherence-tomography-for-in-vivo-high-resolution-retinal-imaging
#4
JOURNAL ARTICLE
Yao Cai, Olivier Thouvenin, Kate Grieve, Pedro Mecê
Under spatially incoherent illumination, time-domain full-field optical coherence tomography (FFOCT) offers the possibility to achieve in vivo retinal imaging at cellular resolution over a wide field of view. Such performance is possible, albeit there is the presence of ocular aberrations even without the use of classical adaptive optics. While the effect of aberrations in FFOCT has been debated these past years, mostly on low-order and static aberrations, we present, for the first time to our knowledge, a method enabling a quantitative study of the effect of statistically representative static and dynamic ocular aberrations on FFOCT image metrics, such as SNR, resolution, and image similarity...
May 1, 2024: Optics Letters
https://read.qxmd.com/read/38691439/enhancing-major-depressive-disorder-diagnosis-with-dynamic-static-fusion-graph-neural-networks
#5
JOURNAL ARTICLE
Tianyi Zhao, Gaoyan Zhang
Major Depressive Disorder (MDD) is a debilitating, complex mental condition with unclear mechanisms hindering diagnostic progress. Research links MDD to abnormal brain connectivity using functional magnetic resonance imaging (fMRI). Yet, existing fMRI-based MDD models suffer from limitations, including neglecting dynamic network traits, lacking interpretability, and struggling with small datasets. We present DSFGNN, a novel graph neural network framework addressing these issues for improved MDD diagnosis. DSFGNN employs a graph isomorphism encoder to model static and dynamic brain networks, achieving effective fusion of temporal and spatial information through a spatiotemporal attention mechanism, thereby enhancing interpretability...
May 1, 2024: IEEE Journal of Biomedical and Health Informatics
https://read.qxmd.com/read/38691400/recognising-the-importance-and-impact-of-imaging-scientists-global-guidelines-for-establishing-career-paths-within-core-facilities
#6
JOURNAL ARTICLE
Graham D Wright, Kerry A Thompson, Yara Reis, Johanna Bischof, Philip Edward Hockberger, Michelle S Itano, Lisa Yen, Stephen Taiye Adelodun, Nikki Bialy, Claire M Brown, Linda Chaabane, Teng-Leong Chew, Andrew I Chitty, Fabrice P Cordelières, Mariana De Niz, Jan Ellenberg, Lize Engelbrecht, Eunice Fabian-Morales, Elnaz Fazeli, Julia Fernandez-Rodriguez, Elisa Ferrando-May, Georgina Fletcher, Graham John Galloway, Adan Guerrero, Jander Matos Guimarães, Caron A Jacobs, Sachintha Jayasinghe, Eleanor Kable, Gregory T Kitten, Shinya Komoto, Xiaoxiao Ma, Jéssica Araújo Marques, Bryan A Millis, Kildare Miranda, Peter JohnO'Toole, Sunday Yinka Olatunji, Federica Paina, Cora Noemi Pollak, Clara Prats, Joanna W Pylvänäinen, Mai Atef Rahmoon, Michael A Reiche, James Douglas Riches, Andres Hugo Rossi, Jean Salamero, Caroline Thiriet, Stefan Terjung, Aldenora Dos Santos Vasconcelos, Antje Keppler
In the dynamic landscape of scientific research, imaging core facilities are vital hubs propelling collaboration and innovation at the technology development and dissemination frontier. Here, we present a collaborative effort led by Global BioImaging (GBI), introducing international recommendations geared towards elevating the careers of Imaging Scientists in core facilities. Despite the critical role of Imaging Scientists in modern research ecosystems, challenges persist in recognising their value, aligning performance metrics and providing avenues for career progression and job security...
May 1, 2024: Journal of Microscopy
https://read.qxmd.com/read/38691292/estimating-turbidity-concentrations-in-highly-dynamic-rivers-using-sentinel-2-imagery-in-google-earth-engine-case-study-of-the-godavari-river-india
#7
JOURNAL ARTICLE
Meena Kumari Kolli, Pennan Chinnasamy
Turbidity is an essential biogeochemical parameter for water quality management because it shapes the physical landscape and regulates ecological systems. It varies spatially and temporally across large water bodies, but monitoring based on point-source field observations remains a difficult task in developing countries due to the need for logistics and costs. In this study, we present a novel semi-analytical approach for estimating turbidity from remote sensing reflectance <mml:math xmlns:mml="https://www...
May 1, 2024: Environmental Science and Pollution Research International
https://read.qxmd.com/read/38690991/pressure-changes-across-a-membrane-formed-by-coacervation-of-oppositely-charged-polymer-surfactant-systems
#8
JOURNAL ARTICLE
Behnam Keshavarzi, Georg Reising, Mohsen Mahmoudvand, Kaloian Koynov, Hans-Jürgen Butt, Aliyar Javadi, Karin Schwarzenberger, Sascha Heitkam, Michelle Dolgos, Apostolos Kantzas, Kerstin Eckert
We investigate the mass transfer and membrane growth processes during capsule formation by the interaction of the biopolymer xanthan gum with C n TAB surfactants. When a drop of xanthan gum polymer solution is added to the surfactant solution, a membrane is formed by coacervation. It encapsulates the polymer drop in the surfactant solution. The underlying mechanisms and dynamic processes during capsule formation are not yet understood in detail. Therefore, we characterized the polymer-surfactant complex formation during coacervation by measuring the surface tension and surface elasticity at the solution-air interface for different surfactant chain lengths and concentrations...
May 1, 2024: Langmuir: the ACS Journal of Surfaces and Colloids
https://read.qxmd.com/read/38690801/minimizing-structural-heterogeneity-in-dna-self-assembled-dye-templating-via-dna-origami-tuned-conformations
#9
JOURNAL ARTICLE
Keitel Cervantes-Salguero, Madison Kadrmas, Brett M Ward, Drew Lysne, Amanda Wolf, Luca Piantanida, Gissela Pascual, William B Knowlton
With recent advances in DNA-templated dye aggregation for leveraging and engineering molecular excitons, a need exists for minimizing structural heterogeneity. Holliday Junction complexes (HJ) are commonly used to covalently template dye aggregates on their core; however, the global conformation of HJ is detrimentally dynamic. Here, the global conformation of the HJ is selectively tuned by restricting its position and orientation by using a sheet-like DNA origami construct (DOC) physisorbed on glass. The HJ arms are fixed with four different designed interduplex angles (IDAs)...
May 1, 2024: Langmuir: the ACS Journal of Surfaces and Colloids
https://read.qxmd.com/read/38690673/-in-situ-single-droplet-analysis-of-emulsified-fat-using-confocal-raman-microscopy-insights-into-crystal-network-formation-within-spatial-resolution
#10
JOURNAL ARTICLE
Dionysios D Neofytos, Sandra Beyer Gregersen, Ulf Andersen, Milena Corredig
Fat crystallization is one of the predominant factors influencing the structure and properties of fat-containing emulsions. In the present study, the role of emulsifiers on fat crystallization dynamics within droplet multiphase systems was evaluated via single-droplet analysis, taking advantage of the non-destructive properties of confocal Raman microscopy. Palm oil droplets dispersed in water were used as a model system, due to palm oil's well-known crystallization properties. Emulsion droplets of the same size were generated using two different emulsifiers (Whey Protein Isolate and Tween 60), at various concentrations...
May 1, 2024: Soft Matter
https://read.qxmd.com/read/38690668/hypertension-impacts-the-oscillatory-dynamics-serving-the-encoding-phase-of-verbal-working-memory
#11
JOURNAL ARTICLE
Yasra Arif, Abraham D Killanin, Jingqi Zhu, Madelyn P Willett, Hannah J Okelberry, Hallie J Johnson, Tony W Wilson
BACKGROUND: Chronic hypertension is known to be a major contributor to cognitive decline, with executive function and working memory being among the domains most commonly affected. Despite the growing literature on such dysfunction in patients with hypertension, the underlying neural processes are poorly understood. METHODS: In this cross-sectional study, we examine these neural processes by having participants with controlled hypertension, uncontrolled hypertension, and healthy controls perform a verbal working memory task during magnetoencephalography...
May 1, 2024: Hypertension
https://read.qxmd.com/read/38690605/significant-association-of-serum-albumin-with-the-severity-of-coronary-microvascular-dysfunction-using-dynamic-czt-spect
#12
JOURNAL ARTICLE
Shih-Chieh Chien, Shan-Ying Wang, Cheng-Ting Tsai, Yu-Chien Shiau, Yen-Wen Wu
OBJECTIVE: Both low serum albumin (SA) concentration and coronary microvascular dysfunction (CMD) are risk factors for the development of heart failure (HF). We hypothesized that SA concentration is associated with myocardial flow reserve (MFR) and implicated in pathophysiological mechanism of HF. METHODS: We retrospectively studied 454 patients undergoing dynamic cardiac cadmium-zinc-telluride myocardial perfusion imaging from April 2018 to February 2020. The population was categorized into three groups according to SA level (g/dL): Group 1: >4, Group 2: 3...
May 1, 2024: Microcirculation: the Official Journal of the Microcirculatory Society, Inc
https://read.qxmd.com/read/38690440/patient-specific-tissue-engineered-vascular-graft-for-aortic-arch-reconstruction
#13
JOURNAL ARTICLE
Hidenori Hayashi, Jacqueline Contento, Hiroshi Matsushita, Paige Mass, Vincent Cleveland, Seda Aslan, Amartya Dave, Raquel Dos Santos, Angie Zhu, Emmett Reid, Tatsuya Watanabe, Nora Lee, Tyler Dunn, Umar Siddiqi, Katherine Nurminsky, Vivian Nguyen, Keigo Kawaji, Joey Huddle, Luka Pocivavsek, Jed Johnson, Mark Fuge, Yue-Hin Loke, Axel Krieger, Laura Olivieri, Narutoshi Hibino
OBJECTIVES: The complexity of aortic arch reconstruction due to diverse 3-dimensional geometrical abnormalities is a major challenge. This study introduces 3-dimensional printed tissue-engineered vascular grafts, which can fit patient-specific dimensions, optimize hemodynamics, exhibit antithrombotic and anti-infective properties, and accommodate growth. METHODS: We procured cardiac magnetic resonance imaging with 4-dimensional flow for native porcine anatomy (n = 10), from which we designed tissue-engineered vascular grafts for the distal aortic arch, 4 weeks before surgery...
April 2024: JTCVS open
https://read.qxmd.com/read/38690372/generalized-modality-responses-in-primary-sensory-neurons-of-awake-mice-during-the-development-of-neuropathic-pain
#14
JOURNAL ARTICLE
Linlin Sun, Chao Chen, Xuwu Xiang, Shengyang Guo, Guang Yang
INTRODUCTION: Peripheral sensory neurons serve as the initial responders to the external environment. How these neurons react to different sensory stimuli, such as mechanical or thermal forces applied to the skin, remains unclear. METHODS: Using in vivo two-photon Ca2+ imaging in the lumbar 4 dorsal root ganglion (DRG) of awake Thy1.2 -GCaMP6s mice, we assessed neuronal responses to various mechanical (punctate or dynamic) and thermal forces (heat or cold) sequentially applied to the paw plantar surface...
2024: Frontiers in Neuroscience
https://read.qxmd.com/read/38690323/-ethiopian-crop-type-2020-ethct2020-dataset-crop-type-data-for-environmental-and-agricultural-remote-sensing-applications-in-complex-ethiopian-smallholder-wheat-based-farming-systems-meher-season-2020-21
#15
JOURNAL ARTICLE
Gerald Blasch, Yoseph Alemayehu, Louise Lesne, Jolan Wolter, Matthieu Taymans, Tsegaab Tesfaye, Tamirat Negash, Mequanint Andulalem, Kitessa Gutu, Megersa Debela, Zerihun Eshetu, Kindie Tesfaye, Khondoker Mottaleb, Pierre Defourny, David P Hodson
Crop type observation is crucial for various environmental and agricultural remote sensing applications including land use and land cover mapping, crop growth monitoring, crop modelling, yield forecasting, disease surveillance, and climate modelling. Quality-controlled georeferenced crop type information is essential for calibrating and validating machine learning algorithms. However, publicly available field data is scarce, particularly in the highly dynamic smallholder farming systems of sub-Saharan Africa...
June 2024: Data in Brief
https://read.qxmd.com/read/38689823/spatial-distribution-of-tumor-associated-macrophages-in-an-orthotopic-prostate-cancer-mouse-model
#16
JOURNAL ARTICLE
Korie A Grayson, Joshua D Greenlee, Lauren E Himmel, Lauren A Hapach, Cynthia A Reinhart-King, Michael R King
Mounting evidence suggests that the immune landscape within prostate tumors influences progression, metastasis, treatment response, and patient outcomes. In this study, we investigated the spatial density of innate immune cell populations within NOD.SCID orthotopic prostate cancer xenografts following microinjection of human DU145 prostate cancer cells. Our laboratory has previously developed nanoscale liposomes that attach to leukocytes via conjugated E-selectin (ES) and kill cancer cells via TNF-related apoptosis inducing ligand (TRAIL)...
2024: Pathology Oncology Research: POR
https://read.qxmd.com/read/38689806/mr-imaging-findings-of-primary-ovarian-carcinoid-a-novel-finding-of-t1-hyperintense-solid-tissue
#17
Shinya Fujii, Chie Inoue, Hiroto Yunaga, Takuro Gonda, Jun Makishima, Ryoya Ochiai, Daisuke Yamaji, Kanae Ozaki
Ovarian carcinoid is a rare well-differentiated neuroendocrine tumor resembling those arising in the gastrointestinal tract. We present a case of ovarian carcinoid with magnetic resonance imaging (MRI) findings. A 50-year-old woman with genital bleeding and severe constipation was referred to our hospital. On MR imaging, a left ovarian tumor showed iso to high signal intensity on T1-weighted images (T1WI), relatively low signal intensity on T2WI, and slightly high signal intensity on diffusion-weighted images...
July 2024: Radiology Case Reports
https://read.qxmd.com/read/38689714/bayesian-brain-computing-and-the-free-energy-principle-an-interview-with-karl-friston
#18
JOURNAL ARTICLE
Wenlian Lu
The free-energy principle entails the Bayesian brain hypothesis that can be implemented by many schemes considered in this field. The combination of multimodal brain imaging and free-energy minimization has shown promise in unraveling complex brain dynamics and understanding the interactions among distinct brain regions. The Bayesian mechanics of brain computing gives a unique route to understanding authentic (neuromimetic) intelligence and, more importantly, points towards the development of brain-inspired intelligence...
May 2024: National Science Review
https://read.qxmd.com/read/38689500/cryo-em-images-of-phase-separated-lipid-bilayer-vesicles-analyzed-with-a-machine-learning-approach
#19
JOURNAL ARTICLE
Karan D Sharma, Milka Doktorova, M Neal Waxham, Frederick A Heberle
Lateral lipid heterogeneity (i.e., raft formation) in biomembranes plays a functional role in living cells. Three-component mixtures of low- and high-melting lipids plus cholesterol offer a simplified experimental model for raft domains in which a liquid-disordered (Ld) phase coexists with a liquid-ordered (Lo) phase. Using such models, we recently showed that cryogenic electron microscopy (cryo-EM) can detect phase separation in lipid vesicles based on differences in bilayer thickness. However, the considerable noise within cryo-EM data poses a significant challenge for accurately determining the membrane phase state at high spatial resolution...
April 30, 2024: Biophysical Journal
https://read.qxmd.com/read/38689013/oncogenic-kras-induces-spatiotemporally-specific-tissue-deformation-through-converting-pulsatile-into-sustained-erk-activation
#20
JOURNAL ARTICLE
Tianchi Xin, Sara Gallini, Haoyang Wei, David G Gonzalez, Catherine Matte-Martone, Hiroki Machida, Hironobu Fujiwara, H Amalia Pasolli, Kathleen C Suozzi, Lauren E Gonzalez, Sergi Regot, Valentina Greco
Tissue regeneration and maintenance rely on coordinated stem cell behaviours. This orchestration can be impaired by oncogenic mutations leading to cancer. However, it is largely unclear how oncogenes perturb stem cells' orchestration to disrupt tissue. Here we used intravital imaging to investigate the mechanisms by which oncogenic Kras mutation causes tissue disruption in the hair follicle. Through longitudinally tracking hair follicles in live mice, we found that KrasG12D , a mutation that can lead to squamous cell carcinoma, induces epithelial tissue deformation in a spatiotemporally specific manner, linked with abnormal cell division and migration...
April 30, 2024: Nature Cell Biology
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