Steven A Kemp, Kimia Kamelian, Diego F Cuadros, Mark T K Cheng, Elphas Okango, Willem Hanekom, Thumbi Ndung'u, Deenan Pillay, David Bonsall, Emily B Wong, Frank Tanser, Mark J Siedner, Ravindra K Gupta
Despite expanded antiretroviral therapy (ART) in South Africa, HIV-1 transmission persists. Integrase strand transfer inhibitors (INSTI) and long-acting injectables offer potential for superior viral suppression, but pre-existing drug resistance could threaten their effectiveness. In a community-based study in rural KwaZulu-Natal, prior to widespread INSTI usage, we enroled 18,025 individuals to characterise HIV-1 drug resistance and transmission networks to inform public health strategies. HIV testing and reflex viral load quantification were performed, with deep sequencing (20% variant threshold) used to detect resistance mutations...
April 29, 2024: Nature Communications