keyword
https://read.qxmd.com/read/38564685/solving-missing-heritability-in-patients-with-familial-adenomatous-polyposis-with-dna-rna-paired-testing
#41
JOURNAL ARTICLE
Colin C Young, Carolyn Horton, Jessica Grzybowski, Nelly Abualkheir, Jesus Ramirez Castano, Bhuvan Molparia, Rachid Karam, Elizabeth Chao, Marcy E Richardson
PURPOSE: Patients with germline pathogenic variants (PVs) in APC develop tens (attenuated familial adenomatous polyposis [AFAP]) to innumerable (classic FAP) adenomatous polyps in their colon and are at significantly increased lifetime risk of colorectal cancer. Up to 10% of FAP and up to 50% of patients with AFAP who have undergone DNA-only multigene panel testing (MGPT) do not have an identified PV in APC . We seek to demonstrate how the addition of RNA sequencing run concurrently with DNA can improve detection of germline PVs in individuals with a clinical presentation of AFAP/FAP...
March 2024: JCO Precision Oncology
https://read.qxmd.com/read/38560182/supporting-self-regulated-learning-in-colonoscopy-training-a-comparison-cohort-trial
#42
JOURNAL ARTICLE
Claudia Jaensch, Rune Dall Jensen, Ryan Brydges, Charlotte Paltved, Anders Husted Madsen
AIM: This study aimed to demonstrate that using a self-regulated learning (SRL) approach can improve colonoscopy performance skills. BACKGROUND: Colonoscopy is the gold standard for detecting colorectal cancer and removing its precursors: polyps. Acquiring proficiency in colonoscopy is challenging, requiring completion of several hundred procedures. SRL seems to be beneficial to help trainees acquire competencies in regulating their future learning processes and enhance the outcomes of current learning situations...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38551396/multi-scale-nested-unet-with-transformer-for-colorectal-polyp-segmentation
#43
JOURNAL ARTICLE
Zenan Wang, Zhen Liu, Jianfeng Yu, Yingxin Gao, Ming Liu
BACKGROUND: Polyp detection and localization are essential tasks for colonoscopy. U-shape network based convolutional neural networks have achieved remarkable segmentation performance for biomedical images, but lack of long-range dependencies modeling limits their receptive fields. PURPOSE: Our goal was to develop and test a novel architecture for polyp segmentation, which takes advantage of learning local information with long-range dependencies modeling...
March 29, 2024: Journal of Applied Clinical Medical Physics
https://read.qxmd.com/read/38551073/polyketide-synthase-positive-escherichia-coli-one-time-measurement-in-stool-is-not-informative-of-colorectal-cancer-risk-in-a-screening-setting
#44
JOURNAL ARTICLE
Willemijn de Klaver, Meike de Wit, Anne Bolijn, Marianne Tijssen, Pien Delis-van Diemen, Margriet Lemmens, Manon Cw Spaander, Evelien Dekker, Monique E van Leerdam, Veerle Mh Coupé, Ruben van Boxtel, Hans Clevers, Beatriz Carvalho, Gerrit A Meijer
Environmental factors like the pathogenicity island polyketide synthase positive (pks+) Escherichia coli (E. coli) could have potential for risk stratification in colorectal cancer (CRC) screening. The association between pks+ E. coli measured in fecal immunochemical test (FIT) samples and the detection of advanced neoplasia (AN) at colonoscopy was investigated. Biobanked FIT samples were analyzed for both presence of E. coli and pks+ E. coli and correlated with colonoscopy findings; 5020 CRC screening participants were included...
March 29, 2024: Journal of Pathology
https://read.qxmd.com/read/38550997/multi-step-validation-of-a-deep-learning-based-system-with-visual-explanations-for-optical-diagnosis-of-polyps-with-advanced-features
#45
JOURNAL ARTICLE
Qing-Wei Zhang, Zhengjie Zhang, Jianwei Xu, Zi-Hao Dai, Ran Zhao, Jian Huang, Hong Qiu, Zhao-Rong Tang, Bo Niu, Xun-Bing Zhang, Peng-Fei Wang, Mei Yang, Wan-Yin Deng, Yan-Sheng Lin, Suncheng Xiang, Zhi-Zheng Ge, Dahong Qian, Xiao-Bo Li
Artificial intelligence (AI) has been found to assist in optical differentiation of hyperplastic and adenomatous colorectal polyps. We investigated whether AI can improve the accuracy of endoscopists' optical diagnosis of polyps with advanced features. We introduced our AI system distinguishing polyps with advanced features with more than 0.870 of accuracy in the internal and external validation datasets. All 19 endoscopists with different levels showed significantly lower diagnostic accuracy (0.410-0.580) than the AI...
April 19, 2024: IScience
https://read.qxmd.com/read/38550767/standard-screening-high-definition-colonoscopy-without-any-optimization-device-is-no-longer-relevant-time-to-move-to-optimized-screening-colonoscopy
#46
EDITORIAL
David Karsenti
Optimizing the adenoma detection rate (ADR) is a major goal in colorectal cancer (CCR) screening, as it has long been established that ADR is inversely proportional to the risk of post-colonoscopy CRC occurrence. To achieve this goal, many optimization devices have been developed, and numerous randomized controlled trials have been conducted to evaluate the benefits of these devices compared with a "standard arm," which corresponds to date to high-definition white light (HD-WLI) colonoscopy. Numerous studies have confirmed the positive impact of various optimization devices, such as caps, computer-aided detection, and contrast-enhanced technologies...
March 2024: Endoscopy International Open
https://read.qxmd.com/read/38550765/verification-of-the-increase-in-concomitant-dysplasia-and-cancer-with-the-size-of-sessile-serrated-lesions
#47
JOURNAL ARTICLE
Daisuke Ohki, Yosuke Tsuji, Hiroyuki Hisada, Hideki Nakagawa, Satoru Mizutani, Kaori Oshio, Junichi Sato, Dai Kubota, Rina Cho, Yuko Miura, Hiroya Mizutani, Yoshiki Sakaguchi, Yu Takahashi, Seiichi Yakabi, Naomi Kakushima, Nobutake Yamamichi, Tetsuo Ushiku, Mitsuhiro Fujishiro
Background and study aims This study aimed to evaluate the relationship between sessile serrated lesion (SSL) size and the comorbidity rate of SSL with dysplasia (SSLD) and cancer in SSL (SSL-cancer). Patients and methods This retrospective, single-center analysis identified SSL cases that underwent endoscopic resection between January 2015 and December 2022. The prevalence of SSL, SSLD, and SSL-cancer and their annual trends were assessed. The tumor diameter was stratified as 0 to 5 mm, 6 to 9 mm, 10 to 19 mm, and ≥ 20 mm in size...
March 2024: Endoscopy International Open
https://read.qxmd.com/read/38550160/retracted-detection-and-classification-of-colorectal-polyp-using-deep-learning
#48
BioMed Research International
[This retracts the article DOI: 10.1155/2022/2805607.].
2024: BioMed Research International
https://read.qxmd.com/read/38540970/diagnostic-accuracy-of-fecal-calprotectin-in-discriminating-organic-inflammatory-gastrointestinal-diseases-and-functional-gastrointestinal-disorders-in-older-patients
#49
JOURNAL ARTICLE
Antonella Gallo, Marcello Covino, Silvia Baroni, Sara Camilli, Francesca Ibba, Silvia Andaloro, Maria Chiara Agnitelli, Fiammetta Maria Rognoni, Francesco Landi, Massimo Montalto
Fecal calprotectin (FC) has been largely recognized as a surrogate marker of intestinal neutrophilic inflammation, very reliable in distinguishing between inflammatory bowel diseases and functional gastrointestinal (GI) disorders. Aging has been suggested to influence FC results and their diagnostic accuracy; however, no studies are specifically targeted on this focus. In a retrospective study, we evaluated the eventual age-differences of the diagnostic accuracy of FC in discriminating between organic-inflammatory GI diseases and functional GI disorders...
February 21, 2024: Journal of Personalized Medicine
https://read.qxmd.com/read/38540414/a-pot1-founder-variant-associated-with-early-onset-recurrent-melanoma-and-various-solid-malignancies
#50
REVIEW
Aasem Abu Shtaya, Inbal Kedar, Lily Bazak, Lina Basel-Salmon, Sarit Farage Barhom, Michal Naftali, Marina Eskin-Schwartz, Ohad S Birk, Shirley Polager-Modan, Nitzan Keidar, Gili Reznick Levi, Zohar Levi, Tamar Yablonski-Peretz, Ahmad Mahamid, Ori Segol, Reut Matar, Yifat Bareli, Noy Azoulay, Yael Goldberg
POT1 (Protection of Telomeres 1) is a key component of the six-membered shelterin complex that plays a critical role in telomere protection and length regulation. Germline variants in the POT1 gene have been implicated in predisposition to cancer, primarily to melanoma and chronic lymphocytic leukemia (CLL). We report the identification of POT1 p.(I78T), previously ranked with conflicting interpretations of pathogenicity, as a founder pathogenic variant among Ashkenazi Jews (AJs) and describe its unique clinical landscape...
March 13, 2024: Genes
https://read.qxmd.com/read/38538774/utilizing-adaptive-deformable-convolution-and-position-embedding-for-colon-polyp-segmentation-with-a-visual-transformer
#51
JOURNAL ARTICLE
Mohamed Yacin Sikkandar, Sankar Ganesh Sundaram, Ahmad Alassaf, Ibrahim AlMohimeed, Khalid Alhussaini, Adham Aleid, Salem Ali Alolayan, P Ramkumar, Meshal Khalaf Almutairi, S Sabarunisha Begum
Polyp detection is a challenging task in the diagnosis of Colorectal Cancer (CRC), and it demands clinical expertise due to the diverse nature of polyps. The recent years have witnessed the development of automated polyp detection systems to assist the experts in early diagnosis, considerably reducing the time consumption and diagnostic errors. In automated CRC diagnosis, polyp segmentation is an important step which is carried out with deep learning segmentation models. Recently, Vision Transformers (ViT) are slowly replacing these models due to their ability to capture long range dependencies among image patches...
March 27, 2024: Scientific Reports
https://read.qxmd.com/read/38534264/sebaceomas-in-a-muir-torre-like-phenotype-in-a-patient-with-mutyh-associated-polyposis
#52
Julia Guarrera, James C Prezzano, Kathleen A Mannava
This case report describes a case of a patient with MUTYH-associated polyposis (MAP), who presented with multiple sebaceomas in a Muir-Torre-like phenotype. MAP is caused by mutations in MUTYH, a base excision repair gene responsible for detecting and repairing the 8-oxo-G:A transversion caused by reactive oxygen species. MAP is associated with an increased risk of developing adenomatous polyps and colorectal cancer. Muir-Torre syndrome is a clinical phenotype of Lynch syndrome, which presents with multiple cutaneous sebaceous neoplasms...
March 4, 2024: Dermatopathology (Basel, Switzerland)
https://read.qxmd.com/read/38533237/hot-avulsion-versus-argon-plasma-coagulation-for-the-management-of-the-non-ensnarable-polyp-a-multicenter-randomized-controlled-trial
#53
JOURNAL ARTICLE
Chloe Attree, Ravinder Ogra, Ian F Yusoff, Alan C Moss, Angela Jacques, Gregor Brown, Sina Alexander, Marios Efthymiou, Spiro Raftopoulos
BACKGROUND AND AIM: Snare resection of nonlifting colonic lesions often requires supplemental techniques. We compared the success rates of neoplasia eradication using hot avulsion and argon plasma coagulation in colonic polyps when complete snare polypectomy had failed. METHODS: Polyps that were not completely resectable by snare polypectomy were randomized to argon plasma coagulation or hot avulsion for completion of resection. Argon plasma coagulation was delivered using a forward shooting catheter, using a nontouch technique (flow 1...
March 2024: JGH Open: An Open Access Journal of Gastroenterology and Hepatology
https://read.qxmd.com/read/38526618/review-of-animal-models-of-colorectal-cancer-in-different-carcinogenesis-pathways
#54
REVIEW
Xue Chen, Yirong Ding, Yun Yi, Zhishan Chen, Jiaping Fu, Ying Chang
Colorectal cancer (CRC) is a common malignant tumor of the gastrointestinal tract with increasing morbidity and mortality. Exploring the factors affecting colorectal carcinogenesis and controlling its occurrence at its root is as important as studying post-cancer treatment and management. Establishing ideal animal models of CRC is crucial, which can occur through various pathways, such as adenoma-carcinoma sequence, inflammation-induced carcinogenesis, serrated polyp pathway and de-novo pathway. This article aims to categorize the existing well-established CRC animal models based on different carcinogenesis pathways, and to describe their mechanisms, methods, advantages and limitations using domestic and international literature sources...
March 25, 2024: Digestive Diseases and Sciences
https://read.qxmd.com/read/38524003/an-unusual-and-protracted-course-of-a-haggitt-3-malignant-polyp-recurrence
#55
Pratik Raichurkar, Tae Jun Kim, Christopher Byrne
Timely detection of colorectal cancer recurrence is paramount, as treatment of early-stage recurrence greatly improves survival and outcomes. Current guidelines outline post-resection surveillance through endoscopy, CT imaging, and tumor markers for five years; however, there is minimal data to guide follow-up beyond this. We present the case of a 60-year-old female with locoregional recurrence 15 years after endoscopic mucosal resection of a low-grade Haggit level 3 sigmoid colon polyp. Unusually the recurrence was noted as an incidental finding following investigation of an elevated alpha-fetoprotein level post liver transplant, and a retrospective review of imaging revealed a calcified sigmoid mesentery mass...
February 2024: Curēus
https://read.qxmd.com/read/38523290/estimation-of-risk-posed-by-malignant-polyps-amongst-colorectal-surgeons-in-australia-and-new-zealand
#56
JOURNAL ARTICLE
Andrew P Zammit, Ian Brown, John D Hooper, David A Clark, Andrew D Riddell
PURPOSE: The estimation of the risk posed by malignant polyps for residual or lymphatic disease plays a central role. This study investigated colorectal surgeons' assessment of these risks associated with malignant polyps. METHODS: A cross-sectional questionnaire was electronically administered to colorectal surgeons in Australia and New Zealand in October 2022. The questionnaire contained 17 questions on demographics, when surgeons consider colorectal resection appropriate, and the risk assessment for 5 hypothetical malignant polyps...
March 25, 2024: Annals of Coloproctology
https://read.qxmd.com/read/38520785/sc-net-symmetrical-conical-network-for-colorectal-pathology-image-segmentation
#57
JOURNAL ARTICLE
Gang Zhang, Zifen He, Yinhui Zhang, Zhenhui Li, Lin Wu
BACKGROUND AND OBJECTIVE: Image segmentation of histopathology of colorectal cancer is a core task of computer aided medical image diagnosis system. Existing convolutional neural networks generally extract multi-scale information in linear flow structures by inserting multi-branch modules, which is difficult to extract heterogeneous semantic information under multi-level and different receptive field and tough to establish context dependency among different receptive field features. METHODS: To address these issues, we propose a symmetric spiral progressive feature fusion encoder-decoder network called the Symmetric Conical Network (SC-Net)...
March 13, 2024: Computer Methods and Programs in Biomedicine
https://read.qxmd.com/read/38515581/the-histologic-features-molecular-features-detection-and-management-of-serrated-polyps-a-review
#58
REVIEW
Jin-Dong Wang, Guo-Shuai Xu, Xin-Long Hu, Wen-Qiang Li, Nan Yao, Fu-Zhou Han, Yin Zhang, Jun Qu
The serrated pathway to colorectal cancers (CRCs) is a significant pathway encompassing five distinct types of lesions, namely hyperplastic polyps (HPs), sessile serrated lesions (SSLs), sessile serrated lesions with dysplasia (SSL-Ds), traditional serrated adenomas (TSAs), and serrated adenoma unclassified. In contrast to the conventional adenoma-carcinoma pathway, the serrated pathway primarily involves two mechanisms: BRAF/KRAS mutations and CpG island methylator phenotype (CIMP). HPs are the most prevalent non-malignant lesions, while SSLs play a crucial role as precursors to CRCs, On the other hand, traditional serrated adenomas (TSAs) are the least frequently encountered subtype, also serving as precursors to CRCs...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38513346/clinical-description-of-two-cases-of-cowden-syndrome-and-the-implication-regarding-thyroid-cancer
#59
JOURNAL ARTICLE
Stephanie Patrick, Deirdre James
SUMMARY: Thyroid cancer is one of the most common manifestations of Cowden syndrome, yet the syndrome is rare. The incidence of Cowden syndrome is 1 in 200,000. The diagnosis can be made clinically when patients present with a combination of symptoms such as mucocutaneous lesions with a strong personal or family history of thyroid, breast, endometrial, and colorectal cancer. A high index of suspicion is required to provide a clinical diagnosis utilizing major and minor criteria. Once a clinical diagnosis is made, genetic testing for a PTEN mutation, a tumor suppressor gene, is recommended...
January 1, 2024: Endocrinology, Diabetes & Metabolism Case Reports
https://read.qxmd.com/read/38511795/hot-versus-cold-snare-for-colorectal-polypectomies-sized-up-to-10mm-a-systematic-review-and-meta-analysis-of-randomized-controlled-trials
#60
JOURNAL ARTICLE
Paulo Ricardo Pavanatto Cavassola, Diogo Turiani Hourneaux de Moura, Bruno Salomão Hirsch, Davi Lucena Landim, Wanderley Marques Bernardo, Eduardo Guimarães Hourneaux de Moura
BACKGROUND: Colorectal cancer is the third most common cancer, and prevention relies on screening programs with resection complete resection of neoplastic lesions. OBJECTIVE: We aimed to evaluate the best snare polypectomy technique for colorectal lesions up to 10 mm, focusing on complete resection rate, and adverse events. METHODS: A comprehensive search using electronic databases was conducted to identify randomized controlled trials comparing hot versus cold snare resection for polyps sized up to 10 mm, and following PRISMA guidelines, a meta-analysis was performed...
2024: Arquivos de Gastroenterologia
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