keyword
https://read.qxmd.com/read/38771918/condensation-of-rnase-l-promotes-its-rapid-activation-in-response-to-viral-infection-in-mammalian-cells
#1
JOURNAL ARTICLE
Renee Cusic, James M Burke
Oligoadenylate synthetase 3 (OAS3) and ribonuclease L (RNase L) are components of a pathway that combats viral infection in mammals. Upon detection of viral double-stranded RNA (dsRNA), OAS3 synthesizes 2'-5'-oligo(A), which activates the RNase domain of RNase L by promoting the homodimerization and oligomerization of RNase L monomers. Activated RNase L rapidly degrades all cellular mRNAs, shutting off several cellular processes. We sought to understand the molecular mechanisms underlying the rapid activation of RNase L in response to viral infection...
May 21, 2024: Science Signaling
https://read.qxmd.com/read/38769064/protvar-mapping-and-contextualizing-human-missense-variation
#2
JOURNAL ARTICLE
James D Stephenson, Prabhat Totoo, David F Burke, Jürgen Jänes, Pedro Beltrao, Maria J Martin
Genomic variation can impact normal biological function in complex ways and so understanding variant effects requires a broad range of data to be coherently assimilated. Whilst the volume of human variant data and relevant annotations has increased, the corresponding increase in the breadth of participating fields, standards and versioning mean that moving between genomic, coding, protein and structure positions is increasingly complex. In turn this makes investigating variants in diverse formats and assimilating annotations from different resources challenging...
May 20, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38769029/monitoring-post-spawning-movement-habitat-use-and-survival-of-adult-anadromous-rainbow-smelt-using-acoustic-telemetry-in-a-new-hampshire-estuary
#3
JOURNAL ARTICLE
Chloe F Pearson, Lars J Hammer, Alyson L Eberhardt, Linas W Kenter, David L Berlinsky, Wellsley J Costello, Nathan T Hermann, Aliya Caldwell, Emily A Burke, Benjamin D Walther, Nathan B Furey
Anadromous rainbow smelt (Osmerus mordax, [Mitchill 1814]) are found along the northeast Atlantic coastline of North America, with their range now limited to north of Cape Cod, Massachusetts, USA. Although their anadromous life cycles are described broadly, gaps remain regarding how adult rainbow smelt use estuaries post-spawning, including movement behaviors, habitats used, and specific timing of emigration to coastal waters. In spring 2021, we used acoustic telemetry to characterize movements during and after the spawning season of rainbow smelt captured in tributaries to Great Bay, New Hampshire, USA, a large estuarine system near the southern edge of their range...
May 20, 2024: Journal of Fish Biology
https://read.qxmd.com/read/38768450/artificial-intelligence-for-real-time-prediction-of-the-histology-of-colorectal-polyps-by-general-endoscopists
#4
JOURNAL ARTICLE
Douglas K Rex, Indira Bhavsar-Burke, Daniel Buckles, James Burton, Amanda Cartee, Kevin Comar, Adam Edwards, Blair Fennimore, Monika Fischer, Mark Gerich, Ashley Gilmore, Shadi Hamdeh, Jeffrey Hoffman, Michael Ibach, Mollie Jackson, Toyia James-Stevenson, Tonya Kaltenbach, Jeffrey Kaplan, Saurabh Kapur, Daniel Kohm, Michael Kriss, Shanker Kundumadam, Kondal R Kyanam Kabir Baig, Paul Menard-Katcher, Cary Kraft, James Langworthy, Bharat Misra, Eric Molloy, Juan Carlos Munoz, John Norvell, Thomas Nowak, Itegbemie Obaitan, Swati Patel, Mitesh Patel, Shajan Peter, B Marie Reid, Nicholas Rogers, Jason Ross, James Ryan, Sashidhar Sagi, Akira Saito, Salih Samo, Fayez Sarkis, Frank I Scott, Robert Siwiec, Shelby Sullivan, Amanda Wieland, Jianying Zhang, Alessandro Repici, Cesare Hassan, Michael F Byrne, Amit Rastogi
BACKGROUND: Real-time prediction of histologic features of small colorectal polyps may prevent resection and/or pathologic evaluation and therefore decrease colonoscopy costs. Previous studies showed that computer-aided diagnosis (CADx) was highly accurate, though it did not outperform expert endoscopists. OBJECTIVE: To assess the diagnostic performance of histologic predictions by general endoscopists before and after assistance from CADx in a real-life setting...
May 21, 2024: Annals of Internal Medicine
https://read.qxmd.com/read/38767616/-streptomyces-beigongshangae-sp-nov-isolated-from-baijiu-fermented-grains-could-transform-ginsenosides-of-panax-notoginseng
#5
JOURNAL ARTICLE
Bo Liu, Haoyue Gu, Rui Shi, Xiahong He, Zhanbin Sun, Qing Ren, Hanxu Pan
A Gram-stain-positive actinomycete, designated REN17T , was isolated from fermented grains of Baijiu collected from Sichuan, PR China. It exhibited branched substrate mycelia and a sparse aerial mycelium. The optimal growth conditions for REN17T were determined to be 28 °C and pH 7, with a NaCl concentration of 0 % (w/v). ll-Diaminopimelic acid was the diagnostic amino acid of the cell-wall peptidoglycan and the polar lipids were composed of phosphatidylethanolamine, phosphatidylinositol, an unidentified phospholipid, two unidentified lipids and four unidentified glycolipids...
May 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38767244/a-modular-communicative-leadless-pacing-defibrillator-system
#6
JOURNAL ARTICLE
Reinoud E Knops, Michael S Lloyd, Paul R Roberts, David J Wright, Lucas V A Boersma, Rahul Doshi, Paul A Friedman, Petr Neuzil, Carina Blomström-Lundqvist, Maria Grazia Bongiorni, Martin C Burke, Daniel Gras, Steven P Kutalek, Anish K Amin, Eugene Y Fu, Laurence M Epstein, Jose Maria Tolosana, Thomas D Callahan, Johan D Aasbo, Ralph Augostini, Harish Manyam, Devi G Nair, Blandine Mondésert, Wilber W Su, Chris Pepper, Marc A Miller, Jon Grammes, Karim Saleh, Christelle Marquie, Faisal M Merchant, Yong-Mei Cha, Colin Cunnington, David S Frankel, Julie West, Elizabeth Matznick, Bryan Swackhamer, Amy J Brisben, Jonathan Weinstock, Kenneth M Stein, Vivek Y Reddy, Lluis Mont
BACKGROUND: The subcutaneous implantable cardioverter-defibrillator (ICD) is associated with fewer lead-related complications than a transvenous ICD; however, the subcutaneous ICD cannot provide bradycardia and antitachycardia pacing. Whether a modular pacing-defibrillator system comprising a leadless pacemaker in wireless communication with a subcutaneous ICD to provide antitachycardia and bradycardia pacing is safe remains unknown. METHODS: We conducted a multinational, single-group study that enrolled patients at risk for sudden death from ventricular arrhythmias and followed them for 6 months after implantation of a modular pacemaker-defibrillator system...
May 18, 2024: New England Journal of Medicine
https://read.qxmd.com/read/38767054/opportunities-to-optimise-care-and-choice-in-joint-replacement-surgery-using-a-digitally-delivered-holistic-prehab-pathway
#7
JOURNAL ARTICLE
Eleanor R Bills, Anastasia Dimopoulos, Anne Lj Burke, Kathryn L Collins, Ecushla C Linedale, Vicki Hume, Jackie Yeoh, Sharyn Coles, Mandy Nolan, Kate Southam, Lesley Thomas, Melanie Ramsey, Jane M Andrews
PURPOSE: To describe the implementation and evaluation of a hospital-initiated, community-based, digital prehabilitation program ( My PreHab Program : MPP ) for adults referred for elective joint replacement. METHODS: MPP was implemented July 2022 and comprises a personalised digital health screen that guides the provision of self-management resources. Adults (<u>></u>18 years) referred and accepted, or already waitlisted, for total knee/hip replacement surgery were eligible...
2024: Journal of Orthopaedic Surgery
https://read.qxmd.com/read/38766608/basal-cell-carcinoma-overlying-a-pacemaker-pocket-in-a-pacemaker-dependent-patient-management-and-course
#8
Edward M Burke, Carrie L Brown, Jack Kamenske, Martin C Burke
No abstract text is available yet for this article.
April 2024: HeartRhythm Case Reports
https://read.qxmd.com/read/38765375/challenging-open-extraction-of-intraarticular-intracapsular-broken-patellar-cerclage-wire-adjacent-to-the-medial-femoral-condyle-following-unsuccessful-arthroscopic-removal
#9
Prashant Bhavani, Mainak Roy, Deepanjan Das, Samir Dwidmuthe, Sumit Raghute
Cerclage wiring and tension band wiring are commonly utilized in orthopedic surgeries for patellar fractures, but wire breakage is a recognized complication. This report presents a rare case where a broken cerclage wire exhibited intraarticular intracapsular migration, prompting open removal adjacent to the medial femoral condyle after unsuccessful attempts at arthroscopic extraction. A 50-year-old male with a history of patellar fracture fixation using cerclage and tension band wiring, presented with persistent knee pain and restricted motion...
April 2024: Curēus
https://read.qxmd.com/read/38763532/a-new-subjective-well-being-index-using-anchored-best-worst-scaling
#10
JOURNAL ARTICLE
Paul F Burke, John M Rose, Simon Fifer, Daniel Masters, Stefan Kuegler, Ariana Cabrera
Subjective well-being (SWB) describes an individual's life evaluation. Direct elicitation methods for SWB via rating scales do not force individuals to trade-off among life domains, whilst best-worst scaling (BWS) approaches only provide relative measures. This paper instead offers a dual-response BWS task, where respondents nominate areas of most and least importance and satisfaction with respect to 11 SWB domains, whilst also eliciting anchoring points to obtain an absolute measure of domain satisfaction...
May 2024: Social Science Research
https://read.qxmd.com/read/38761063/point-of-care-viscoelastic-coagulation-monitor-parameters-in-amazon-parrots-amazona-spp
#11
JOURNAL ARTICLE
Amanda Burke, Miryam Reems, Maria Spriggs
OBJECTIVE: To evaluate the feasibility of the point-of-care viscoelastic coagulation monitor (VCM) in Amazon parrots (Amazona spp.) and describe the parameters with fresh whole-blood samples in healthy Amazon parrots. DESIGN: A total of 18 Amazon parrots were enrolled. Physical examinations, a CBC, and a biochemistry profile, including bile acids, were performed on all parrots. VCM tracings were obtained at the time of venipuncture for baseline laboratory work. MEASUREMENTS AND MAIN RESULTS: The median clot time was 2102 seconds (range: 38...
May 18, 2024: Journal of Veterinary Emergency and Critical Care
https://read.qxmd.com/read/38760756/the-complete-annotated-plastome-sequences-of-six-genera-in-the-tropical-woody-polygonaceae
#12
JOURNAL ARTICLE
Janelle M Burke, Daniel M Koenemann
BACKGROUND: The Polygonaceae is a family well-known for its weeds, and edible plants, Fagopyrum (buckwheat) and Rheum (rhubarb), which are primarily herbaceous and temperate in distribution. Yet, the family also contains a number of lineages that are principally distributed in the tropics and subtropics. Notably, these lineages are woody, unlike their temperate relatives. To date, full-genome sequencing has focused on the temperate and herbaceous taxa. In an effort to increase breadth of genetic knowledge of the Polygonaceae, we here present six fully assembled and annotated chloroplast genomes from six of the tropical, woody genera: Coccoloba rugosa (a narrow and endangered Puerto Rican endemic), Gymnopodium floribundum, Neomillspaughia emarginata, Podopterus mexicanus, Ruprechtia coriacea, and Triplaris cumingiana...
May 17, 2024: BMC Plant Biology
https://read.qxmd.com/read/38760534/application-and-demonstration-of-meso-activity-exposure-factors-to-advance-estimates-of-incidental-soil-ingestion-among-agricultural-workers
#13
JOURNAL ARTICLE
Sara N Lupolt, Brent F Kim, Jacqueline Agnew, Gurumurthy Ramachandran, Thomas A Burke, Ryan David Kennedy, Keeve E Nachman
BACKGROUND: Soil is an understudied and underregulated pathway of chemical exposure, particularly for agricultural workers who cultivate food in soils. Little is known about how agricultural workers spend their time and how they may contact soil while growing food. Exposure factors are behavioral and environmental variables used in exposure estimation. OBJECTIVES: Our study aimed to derive exposure factors describing how growers engage in different tasks and use those factors to advance the use of time-activity data to estimate soil ingestion exposures among agricultural workers...
May 17, 2024: Journal of Exposure Science & Environmental Epidemiology
https://read.qxmd.com/read/38759640/social-control-of-hypothalamus-mediated-male-aggression
#14
Taehong Yang, Cindy F Yang, M Delara Chizari, Niru Maheswaranathan, Kenneth J Burke, Maxim Borius, Sayaka Inoue, Michael C Chiang, Kevin J Bender, Surya Ganguli, Nirao M Shah
No abstract text is available yet for this article.
May 16, 2024: Neuron
https://read.qxmd.com/read/38756432/grading-acanthosis-nigricans-using-a-smartphone-and-color-analysis-a-novel-noninvasive-method-to-screen-for-impaired-glucose-tolerance-and-type-2-diabetes
#15
JOURNAL ARTICLE
Andrew S Dhanoo, Sterling K Ramroach, Felicia Hill-Briggs, Brian N Cockburn
OBJECTIVE: The objective of this study was to develop ANcam, a novel method for identifying acanthosis nigricans (AN) using a smartphone camera and computer-aided color analysis for noninvasive screening of people with impaired glucose tolerance (IGT). RESEARCH DESIGN AND METHODS: Adult and juvenile participants with or without diagnosed type 2 diabetes were recruited in Trinidad and Tobago. After obtaining informed consent, participants' history, demographics, anthropometrics, and A1C were collected and recorded...
2024: Diabetes Spectrum: a Publication of the American Diabetes Association
https://read.qxmd.com/read/38756145/phocus-a-phase-3-randomized-open-label-study-of-sequential-treatment-with-pexa-vec-jx-594-and-sorafenib-in-patients-with-advanced-hepatocellular-carcinoma
#16
JOURNAL ARTICLE
Ghassan K Abou-Alfa, Peter R Galle, Yee Chao, Joseph Erinjeri, Jeong Heo, Mitesh J Borad, Angelo Luca, James Burke, Adina Pelusio, Delphine Agathon, Monika Lusky, Caroline Breitbach, Shukui Qin, Edward Gane
INTRODUCTION: Intratumoral administration of pexa-vec (pexastimogene devacirepvec), an oncolytic and immunotherapeutic vaccinia virus, given to patients with hepatocellular carcinoma (HCC), is associated with both local and distant tumor responses. We hypothesized subsequent treatment with sorafenib could demonstrate superior efficacy. METHODS: This random phase III open-label study evaluated the sequential treatment with pexa-vec followed by sorafenib compared to sorafenib in patients with advanced HCC and no prior systemic treatment...
June 2024: Liver Cancer
https://read.qxmd.com/read/38753786/delocalized-asynchronous-closed-loop-discovery-of-organic-laser-emitters
#17
JOURNAL ARTICLE
Felix Strieth-Kalthoff, Han Hao, Vandana Rathore, Joshua Derasp, Théophile Gaudin, Nicholas H Angello, Martin Seifrid, Ekaterina Trushina, Mason Guy, Junliang Liu, Xun Tang, Masashi Mamada, Wesley Wang, Tuul Tsagaantsooj, Cyrille Lavigne, Robert Pollice, Tony C Wu, Kazuhiro Hotta, Leticia Bodo, Shangyu Li, Mohammad Haddadnia, Agnieszka Wołos, Rafał Roszak, Cher Tian Ser, Carlota Bozal-Ginesta, Riley J Hickman, Jenya Vestfrid, Andrés Aguilar-Granda, Elena L Klimareva, Ralph C Sigerson, Wenduan Hou, Daniel Gahler, Slawomir Lach, Adrian Warzybok, Oleg Borodin, Simon Rohrbach, Benjamin Sanchez-Lengeling, Chihaya Adachi, Bartosz A Grzybowski, Leroy Cronin, Jason E Hein, Martin D Burke, Alán Aspuru-Guzik
Contemporary materials discovery requires intricate sequences of synthesis, formulation, and characterization that often span multiple locations with specialized expertise or instrumentation. To accelerate these workflows, we present a cloud-based strategy that enabled delocalized and asynchronous design-make-test-analyze cycles. We showcased this approach through the exploration of molecular gain materials for organic solid-state lasers as a frontier application in molecular optoelectronics. Distributed robotic synthesis and in-line property characterization, orchestrated by a cloud-based artificial intelligence experiment planner, resulted in the discovery of 21 new state-of-the-art materials...
May 17, 2024: Science
https://read.qxmd.com/read/38753617/development-and-validation-of-the-michigan-chronic-disease-simulation-model-microsim
#18
JOURNAL ARTICLE
James F Burke, Luciana L Copeland, Jeremy B Sussman, Rodney A Hayward, Alden L Gross, Emily M Briceño, Rachael Whitney, Bruno J Giordani, Mitchell S V Elkind, Jennifer J Manly, Rebecca F Gottesman, Darrell J Gaskin, Stephen Sidney, Kristine Yaffe, Ralph L Sacco, Susan R Heckbert, Timothy M Hughes, Andrzej T Galecki, Deborah A Levine
Strategies to prevent or delay Alzheimer's disease and related dementias (AD/ADRD) are urgently needed, and blood pressure (BP) management is a promising strategy. Yet the effects of different BP control strategies across the life course on AD/ADRD are unknown. Randomized trials may be infeasible due to prolonged follow-up and large sample sizes. Simulation analysis is a practical approach to estimating these effects using the best available existing data. However, existing simulation frameworks cannot estimate the effects of BP control on both dementia and cardiovascular disease...
2024: PloS One
https://read.qxmd.com/read/38752363/multiplexed-in-vivo-screening-using-barcoded-aptamer-technology-to-identify-oligonucleotide-based-targeting-reagents
#19
JOURNAL ARTICLE
Brian J Thomas, Caitlyn Guldenpfennig, Mark A Daniels, Donald H Burke, David Porciani
Recent FDA approvals of mRNA vaccines, short-interfering RNAs, and antisense oligonucleotides highlight the success of oligonucleotides as therapeutics. Aptamers are excellent affinity reagents that can selectively label protein biomarkers, but their clinical application has lagged. When formulating a given aptamer for in vivo use, molecular design details can determine biostability and biodistribution; therefore, extensive postselection manipulation is often required for each new design to identify clinically useful reagents harboring improved pharmacokinetic properties...
May 16, 2024: Nucleic Acid Therapeutics
https://read.qxmd.com/read/38751221/improving-explanation-of-motor-disability-with-diffusion-based-graph-metrics-at-onset-of-the-first-demyelinating-event
#20
JOURNAL ARTICLE
Michael A Foster, Ferran Prados, Sara Collorone, Baris Kanber, Niamh Cawley, Indran Davagnanam, Marios C Yiannakas, Lola Ogunbowale, Ailbhe Burke, Frederik Barkhof, Claudia Am Gandini Wheeler-Kingshott, Olga Ciccarelli, Wallace Brownlee, Ahmed T Toosy
BACKGROUND: Conventional magnetic resonance imaging (MRI) does not account for all disability in multiple sclerosis. OBJECTIVE: The objective was to assess the ability of graph metrics from diffusion-based structural connectomes to explain motor function beyond conventional MRI in early demyelinating clinically isolated syndrome (CIS). METHODS: A total of 73 people with CIS underwent conventional MRI, diffusion-weighted imaging and clinical assessment within 3 months from onset...
May 15, 2024: Multiple Sclerosis: Clinical and Laboratory Research
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