keyword
https://read.qxmd.com/read/32455665/the-role-of-lin28-let-7-arid3b-pathway-in-placental-development
#41
REVIEW
Asghar Ali, Gerrit J Bouma, Russell V Anthony, Quinton A Winger
Placental disorders are a major cause of pregnancy loss in humans, and 40-60% of embryos are lost between fertilization and birth. Successful embryo implantation and placental development requires rapid proliferation, invasion, and migration of trophoblast cells. In recent years, microRNAs (miRNAs) have emerged as key regulators of molecular pathways involved in trophoblast function. A miRNA binds its target mRNA in the 3'-untranslated region (3'-UTR), causing its degradation or translational repression. Lethal-7 ( let-7 ) miRNAs induce cell differentiation and reduce cell proliferation by targeting proliferation-associated genes...
May 21, 2020: International Journal of Molecular Sciences
https://read.qxmd.com/read/32423867/identification-and-characterization-of-tumorigenic-circular-rnas-in-cervical-cancer
#42
JOURNAL ARTICLE
Huan Huang, Yan-Fen Chen, Xuan Du, Chun Zhang
Circular RNAs (circRNAs) are a distinctive family of ncRNAs, and they function as key regulators in the initiation, development and progression of various diseases. However, the regulatory roles of circRNAs in the tumorigenesis of cervical cancer (CC) have not been fully understood. In this study, we identified a set of circRNAs in CC and paired normal tissues, using RNA sequencing data, and found that the cancer and normal tissues could be told apart by those differentially expressed (DE) circRNAs, indicating that circRNA expression profiles in CC were significantly different from those in the normal tissues...
May 11, 2020: Cellular Signalling
https://read.qxmd.com/read/32402251/leukemogenic-chromatin-alterations-promote-aml-leukemia-stem-cells-via-a-kdm4c-alkbh5-axl-signaling-axis
#43
JOURNAL ARTICLE
Jiazhen Wang, Yicun Li, Peipei Wang, Guoqiang Han, Tiantian Zhang, Jiwei Chang, Rong Yin, Yi Shan, Jin Wen, Xueqin Xie, Mengdie Feng, Qifan Wang, Jin Hu, Ying Cheng, Tong Zhang, Yashu Li, Zhuying Gao, Chengli Guo, Jing Wang, Jianfei Liang, Manman Cui, Kexin Gao, Jihua Chai, Weidong Liu, Hui Cheng, Lei Li, Fuling Zhou, Lingbo Liu, Yi Luo, Shaoguang Li, Haojian Zhang
N6 -methyladenosine (m6 A) is a commonly present modification of mammalian mRNAs and plays key roles in various cellular processes. m6 A modifiers catalyze this reversible modification. However, the underlying mechanisms by which these m6 A modifiers are regulated remain elusive. Here we show that expression of m6 A demethylase ALKBH5 is regulated by chromatin state alteration during leukemogenesis of human acute myeloid leukemia (AML), and ALKBH5 is required for maintaining leukemia stem cell (LSC) function but is dispensable for normal hematopoiesis...
July 2, 2020: Cell Stem Cell
https://read.qxmd.com/read/32195022/histone-demethylase-kdm4c-activates-hif1%C3%AE-vegfa-signaling-through-the-costimulatory-factor-stat3-in-nsclc
#44
JOURNAL ARTICLE
Xiaowei Wu, Yu Deng, Yukun Zu, Jin Yin
Tumor development is accompanied by high hypoxia and a dense network of immature vessels. The hypoxia-inducible factor/vascular endothelial growth factor (HIF/VEGF) signaling pathway is activated in various solid tumors. It is thought that HIF/VEGF signaling activation results from intratumoral hypoxia partly. Multiple studies have reported that VEGF is a common target gene for both transcription factors STAT3 and HIF1. KDM4C has also been reported to function as a co-activation factor for HIF-1β/VEGF signaling activation...
2020: American Journal of Cancer Research
https://read.qxmd.com/read/31888886/wnt-induced-stabilization-of-kdm4c-is-required-for-wnt-%C3%AE-catenin-target-gene-expression-and-glioblastoma-tumorigenesis
#45
JOURNAL ARTICLE
Yaohui Chen, Runping Fang, Chen Yue, Guoqiang Chang, Peng Li, Qing Guo, Jing Wang, Aidong Zhou, Sicong Zhang, Gregory N Fuller, Xiaobing Shi, Suyun Huang
Wnt/β-catenin signaling activates the transcription of target genes to regulate stem cells and cancer development. However, the contribution of epigenetic regulation to this process is unknown. Here, we report that Wnt activation stabilizes the epigenetic regulator KDM4C that promotes tumorigenesis and survival of human glioblastoma cells by epigenetically activating the transcription of Wnt target genes. KDM4C protein expression was upregulated in human glioblastomas and its expression directly correlated with Wnt activity and Wnt target gene expression...
December 30, 2019: Cancer Research
https://read.qxmd.com/read/31784197/rational-design-synthesis-and-biological-profiling-of-new-kdm4c-inhibitors
#46
JOURNAL ARTICLE
Vatroslav Letfus, Dubravko Jelić, Ana Bokulić, Adriana Petrinić Grba, Sanja Koštrun
The human histone demethylases of the KDM4 family have been related to diseases such as prostate and breast cancer. Majority of currently known inhibitors suffer from the low permeability and low selectivity between the enzyme isoforms. In this study, toxoflavin motif was used to design and synthesize new KDM4C inhibitors with improved biological activity and in vitro ADME properties. Inhibitors displayed good passive cellular permeability and metabolic stability. However, diminishing of redox liability and consequently non-specific influence on cell viability still remains a challenge...
January 1, 2020: Bioorganic & Medicinal Chemistry
https://read.qxmd.com/read/31766290/histone-demethylase-kdm4c-stimulates-the-proliferation-of-prostate-cancer-cells-via-activation-of-akt-and-c-myc
#47
JOURNAL ARTICLE
Ching-Yu Lin, Bi-Juan Wang, Bo-Chih Chen, Jen-Chih Tseng, Shih Sheng Jiang, Kelvin K Tsai, Ying-Ying Shen, Chiou Hwa Yuh, Zong-Lin Sie, Wen-Ching Wang, Hsing-Jien Kung, Chih-Pin Chuu
Our three-dimensional organotypic culture revealed that human histone demethylase (KDM) 4C, a histone lysine demethylase, hindered the acini morphogenesis of RWPE-1 prostate cells, suggesting its potential oncogenic role. Knockdown (KD) of KDM4C suppressed cell proliferation, soft agar colony formation, and androgen receptor (AR) transcriptional activity in PCa cells as well as reduced tumor growth of human PCa cells in zebrafish xenotransplantation assay. Micro-Western array (MWA) analysis indicated that KD of KDM4C protein decreased the phosphorylation of AKT, c-Myc, AR, mTOR, PDK1, phospho-PDK1 S241, KDM8, and proteins involved in cell cycle regulators, while it increased the expression of PTEN...
November 13, 2019: Cancers
https://read.qxmd.com/read/31704649/kdm3a-and-kdm4c-regulate-mesenchymal-stromal-cell-senescence-and-bone-aging-via-condensin-mediated-heterochromatin-reorganization
#48
JOURNAL ARTICLE
Biao Huang, Bin Wang, Wayne Yuk-Wai Lee, Kin Pong U, Kam Tong Leung, Xican Li, Zhenqing Liu, Rui Chen, Jia Cheng Lin, Lai Ling Tsang, Baohua Liu, Ye Chun Ruan, Hsiao Chang Chan, Gang Li, Xiaohua Jiang
Epigenomic changes and stem cell deterioration are two hallmarks of aging. Accumulating evidence suggest that senescence of mesenchymal stromal cells (MSCs) perpetuates aging or age-related diseases. Here we report that two H3K9 demethylases, KDM3A and KDM4C, regulate heterochromatin reorganization via transcriptionally activating condensin components NCAPD2 and NCAPG2 during MSC senescence. Suppression of KDM3A or KDM4C by either genetic or biochemical approach leads to robust DNA damage response and aggravates cellular senescence, whereas overexpression of KDM3A/KDM4C or NCAPD2 promotes heterochromatin reorganization and blunts DNA damage response...
November 22, 2019: IScience
https://read.qxmd.com/read/31575031/ipsc-derived-embryoid-bodies-as-models-of-c-met-mutated-hereditary-papillary-renal-cell-carcinoma
#49
JOURNAL ARTICLE
Jin Wook Hwang, Christophe Desterke, Olivier Féraud, Stephane Richard, Sophie Ferlicot, Virginie Verkarre, Jean Jacques Patard, Julien Loisel-Duwattez, Adlen Foudi, Frank Griscelli, Annelise Bennaceur-Griscelli, Ali G Turhan
Hereditary cancers with cancer-predisposing mutations represent unique models of human oncogenesis, as a driving oncogenic event is present in germline. Currently, there are no satisfactory models to study these malignancies. We report the generation of IPSC from the somatic cells of a patient with hereditary c- met- mutated papillary renal cell carcinoma (PRCC). From these cells we have generated spontaneous aggregates organizing in structures which expressed kidney markers such as PODXL and Six2. These structures expressed PRCC markers both in vitro and in vivo in NSG mice...
September 30, 2019: International Journal of Molecular Sciences
https://read.qxmd.com/read/31456217/glioblastoma-initiating-cells-are-sensitive-to-histone-demethylase-inhibition-due-to-epigenetic-deregulation
#50
JOURNAL ARTICLE
Jan-Philipp Mallm, Paul Windisch, Alva Biran, Zoltan Gal, Sabrina Schumacher, Rainer Glass, Christel Herold-Mende, Eran Meshorer, Martje Barbus, Karsten Rippe
Tumor-initiating cells are a subpopulation of cells that have self-renewal capacity to regenerate a tumor. Here, we identify stem cell-like chromatin features in human glioblastoma initiating cells (GICs) and link them to a loss of the repressive histone H3 lysine 9 trimethylation (H3K9me3) mark. Increasing H3K9me3 levels by histone demethylase inhibition led to cell death in GICs but not in their differentiated counterparts. The induction of apoptosis was accompanied by a loss of the activating H3 lysine 9 acetylation (H3K9ac) modification and accumulation of DNA damage and downregulation of DNA damage response genes...
August 28, 2019: International Journal of Cancer. Journal International du Cancer
https://read.qxmd.com/read/31415216/lin28-let-7-axis-regulates-genes-in-immortalized-human-trophoblast-cells-by-targeting-the-arid3b-complex
#51
JOURNAL ARTICLE
Asghar Ali, Russell V Anthony, Gerrit J Bouma, Quinton A Winger
Abnormal placental development is one of the main etiological factors for intrauterine growth restriction (IUGR). Here, we show that LIN28A and LIN28B are significantly lower and lethal-7 ( let-7 ) microRNAs (miRNAs) significantly higher in term human IUGR vs. normal placentas. We hypothesize that let-7 miRNAs regulate genes with known importance for human placental development [high-mobility group AT-hook 1 ( HMGA1 ), transcriptional regulator Myc-like ( c-myc ), vascular endothelial growth factor A ( VEGF-A ), and Wnt family member 1 ( WNT1 )] by targeting the AT-rich interacting domain (ARID)-3B complex...
August 15, 2019: FASEB Journal: Official Publication of the Federation of American Societies for Experimental Biology
https://read.qxmd.com/read/31270335/iron-dependent-histone-3-lysine-9-demethylation-controls-b-cell-proliferation-and-humoral-immune-responses
#52
JOURNAL ARTICLE
Yuhang Jiang, Cuifeng Li, Qian Wu, Peng An, Laiquan Huang, Jia Wang, Chen Chen, Xi Chen, Fan Zhang, Li Ma, Sanhong Liu, Hanqing He, Shuyun Xie, Yangbai Sun, Hanshao Liu, Yu Zhan, Yu Tao, Zhi Liu, Xiaohua Sun, Yiming Hu, Qi Wang, Deji Ye, Jie Zhang, Shanhua Zou, Ying Wang, Gang Wei, Yongzhong Liu, Yufang Shi, Y Eugene Chin, Yongqiang Hao, Fudi Wang, Xiaoren Zhang
Trace elements play important roles in human health, but little is known about their functions in humoral immunity. Here, we show an important role for iron in inducing cyclin E and B cell proliferation. We find that iron-deficient individuals exhibit a significantly reduced antibody response to the measles vaccine when compared to iron-normal controls. Mice with iron deficiency also exhibit attenuated T-dependent or T-independent antigen-specific antibody responses. We show that iron is essential for B cell proliferation; both iron deficiency and α-ketoglutarate inhibition could suppress cyclin E1 induction and S phase entry of B cells upon activation...
July 3, 2019: Nature Communications
https://read.qxmd.com/read/31225258/offspring-exercise-modulates-beige-adipocyte-numbers-by-differential-regulation-of-h3k9-methyltransferase-g9a-and-demethylase-kdm4c-in-mice-fed-a-maternal-high-fat-diet-p21-067-19
#53
JOURNAL ARTICLE
Kate Larson, Amy Bundy, Travis Alvine, Elizabeth Black Lance, James Roemmich
Objectives: We have shown that a maternal low protein and postnatal high fat (HF) diet increases offspring obesity and type 2 diabetes mellitus (T2DM) risk by epigenetically reducing beige adipocyte (BA) numbers via increased protein expression of G9a (Histone3 Lysine9 dimethyl transferase), an inhibitor of the BA marker FGF21. It is not yet known whether offspring exercise reverses the offspring obesity and T2DM risk caused by the maternal HF diet. Methods: Two month old female C57Bl/6 J mice (F0) were fed a normal fat (NF) 16% diet or a 45% HF diet for 3 months prior to breeding, and subsequent gestation and lactation...
June 2019: Current Developments in Nutrition
https://read.qxmd.com/read/31103287/array-based-dna-methylation-profiling-reveals-peripheral-blood-differential-methylation-in-male-infertility
#54
JOURNAL ARTICLE
Saumya Sarkar, Kumar Mohanty Sujit, Vertika Singh, Rajesh Pandey, Sameer Trivedi, Kiran Singh, Gopal Gupta, Singh Rajender
OBJECTIVE: To study peripheral blood DNA differential methylation in oligozoospermic infertile men in comparison with normozoospermic fertile controls. DESIGN: Case-control study. SETTING: Reproductive biology laboratory. PATIENTS(S): Azoospermic and oligozoospermic infertile patients (n = 6) and normozoospermic fertile controls (n = 6) in the discovery phase, and oligo/asthenozoospermic infertile men (n = 11) and normozoospermic fertile controls (n = 10) in the validation phase...
July 2019: Fertility and Sterility
https://read.qxmd.com/read/30898701/expression-patterns-of-novel-circular-rnas-in-chicken-cells-after-avian-leukosis-virus-subgroup-j-infection
#55
JOURNAL ARTICLE
Yang Zhang, Laidi Wang, Lingling Qiu, Rui Pan, Hao Bai, Yong Jiang, Zhixiu Wang, Yulin Bi, Guohong Chen, Guobin Chang
Avian leukosis virus subgroup J (ALV-J) is an oncogenic retrovirus that causes severe economic losses to the poultry industry worldwide. Circular RNAs (circRNAs) are a class of non-coding RNAs that has been described in various biological systems and pathogenic processes. However, the immune mechanisms in response to circRNAs remain unknown. In this study, high-throughput transcriptome sequencing was used to detect circRNAs present in chicken macrophage (HD11) and chick embryo fibroblast (CEF) cells infected with ALV-J...
March 18, 2019: Gene
https://read.qxmd.com/read/30640062/sufficiency-of-hypoxia-inducible-2-oxoglutarate-dioxygenases-to-block-chemical-oxidative-stress-induced-differentiation-of-human-embryonic-stem-cells
#56
JOURNAL ARTICLE
Eirini Koutsouraki, Steve Pells, Paul A De Sousa
Hypoxia benefits undifferentiated pluripotent stem cell renewal, and 2-oxoglutarate (2OG) dioxygenases have been implicated in pluripotent stem cell induction and renewal. We show in human embryonic stem cells (hESC) that an ambient oxygen-induced oxidative stress response elicited by culture in a hypoxic atmosphere (0.5% O2 ) correlates with the expression of 2OG dioxygenases, which oxidise DNA (TET1, 2, 3) and histone H3 (KDM4C), the former reflected by elevation in genomic 5-hydroxymethylcytosine (5hmC)...
December 12, 2018: Stem Cell Research
https://read.qxmd.com/read/30515476/identification-of-deregulated-signaling-pathways-in-jurkat-cells-in-response-to-a-novel-acylspermidine-analogue-n-4-erucoyl-spermidine
#57
JOURNAL ARTICLE
Syed Shoeb Razvi, Hani Choudhry, Mohammed Nihal Hasan, Mohammed A Hassan, Said Salama Moselhy, Khalid Omer Abualnaja, Mazin A Zamzami, Taha Abduallah Kumosani, Abdulrahman Labeed Al-Malki, Majed A Halwani, Abdulkhaleg Ibrahim, Ali Hamiche, Christian Bronner, Tadao Asami, Mahmoud Alhosin
Natural polyamines such as putrescine, spermidine, and spermine are crucial in the cell proliferation and maintenance in all the eukaryotes. However, the requirement of polyamines in tumor cells is stepped up to maintain tumorigenicity. Many synthetic polyamine analogues have been designed recently to target the polyamine metabolism in tumors to induce apoptosis. N4 -Erucoyl spermidine (designed as N4 -Eru), a novel acylspermidine derivative, has been shown to exert selective inhibitory effects on both hematological and solid tumors, but its mechanisms of action are unknown...
2018: Epigenetics Insights
https://read.qxmd.com/read/30458291/the-kdm-kmt-gene-families-in-the-self-fertilizing-mangrove-rivulus-fish-kryptolebias-marmoratus-suggest-involvement-of-histone-methylation-machinery-in-development-and-reproduction
#58
JOURNAL ARTICLE
Alexandre Fellous, Ryan L Earley, Frederic Silvestre
Histone modifications such as methylation of key lysine residues play an important role in embryonic development in a variety of organisms such as of Pacific oysters, zebrafish and mice. The action of demethylase ("erasers") and methyltransferase ("writers") enzymes regulates precisely the methylation status of each lysine residue. However, despite fishes being very useful model organisms in medicine, evolution and ecotoxicology, most studies have focused on mammalian and plant model organisms, and mechanisms underlying regulation of histones are unknown in fish development outside of zebrafish...
March 1, 2019: Gene
https://read.qxmd.com/read/30444719/inhibition-of-rna-synthesis-during-scriptaid-exposure-enhances-gene-reprogramming-in-scnt-embryos
#59
JOURNAL ARTICLE
Vitor B Rissi, Werner Giehl Glanzner, Mariana Priotto de Macedo, Lady Katerine Serrano Mujica, Karine Campagnolo, Karina Gutierrez, Alessandra Bridi, Hernan Baldassarre, Paulo Bayard Gonçalves, Vilceu Bordignon
Insufficient epigenetic reprogramming is incompatible with normal development of embryos produced by somatic cell nuclear transfer (SCNT), but treatment with histone deacetylases inhibitors (HDACi) enhance development of SCNT embryos. However, the mechanisms underpinning HDACi benefits in SCNT embryos remain largely uncharacterized. We hypothesized that, in addition to enhancing reprogramming, HDACi treatment may promote expression of genes not required for early development of SCNT embryos. To test this hypothesis, RNA synthesis was inhibited by treating bovine SCNT embryos with 5,6-Dichlorobenzimidazole 1-β-D-ribofuranoside (DBR), which were concomitantly treated or not with Scriptaid (Scrip; an HDACi)...
November 1, 2018: Reproduction
https://read.qxmd.com/read/30426231/unraveling-kdm4-histone-demethylase-expression-and-its-association-with-adverse-cytogenetic-findings-in-chronic-lymphocytic-leukemia
#60
JOURNAL ARTICLE
Luma Dayane de Carvalho Filiú-Braga, Teresa Raquel Tavares Serejo, Antonio Roberto Lucena-Araujo, Francisco Assis Rocha Neves, Juliana Lott de Carvalho, Eduardo Magalhaes Rego, Felipe Saldanha-Araujo
The acquisition of complex karyotypes is related to the progression of chronic lymphocytic leukemia (CLL) and patients with this condition have a poor prognosis. Despite recent advances in the classification of prognosis in CLL patients, understanding of the molecular mechanisms that lead to genomic instability and progression of this disease remains inadequate. Interestingly, dysregulated expression of KDM4 members is involved in the progression of several cancer types and plays a role in the DNA damage response; however, the gene expression profile and the importance of KDM4 members in CLL are still unknown...
November 13, 2018: Medical Oncology
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