keyword
https://read.qxmd.com/read/38662454/rna-splicing-analysis-deciphers-developmental-hierarchies-and-reveals-therapeutic-targets-in-adult-glioma
#1
JOURNAL ARTICLE
Xiao Song, Deanna Tiek, Shunichiro Miki, Tianzhi Huang, Minghui Lu, Anshika Goenka, Rebeca P Iglesia, Xiaozhou Yu, Runxin Wu, Maya N Walker, Chang Zeng, Hardik Shah, Shao Huan Samuel Weng, Allen Huff, Wei Zhang, Tomoyuki Koga, Christopher G Hubert, Craig M Horbinski, Frank F Furnari, Bo Hu, Shi-Yuan Cheng
Widespread alterations in RNA alternative splicing (AS) have been identified in adult gliomas. However, their regulatory mechanism, biological significance, and therapeutic potential remain largely elusive. Here, using a computational approach with both bulk and single cell RNA-sequencing, we uncover a prognostic AS signature linked with neural developmental hierarchies. Using advanced iPSC glioma models driven by glioma driver mutations, we show that this AS signature could be enhanced by EGFRvIII and inhibited by in situ IDH1 mutation...
April 25, 2024: Journal of Clinical Investigation
https://read.qxmd.com/read/38546351/loss-of-ceramide-synthase-5-inhibits-the-development-of-experimentally-induced-aortic-valve-stenosis
#2
JOURNAL ARTICLE
Laurine Reese, Sven Thomas Niepmann, Philip Düsing, Lea Hänschke, Thomas Beiert, Sebastian Zimmer, Georg Nickenig, Reinhard Bauer, Felix Jansen, Andreas Zietzer
AIM: Inflammation and calcification are hallmarks in the development of aortic valve stenosis (AVS). Ceramides mediate inflammation and calcification in the vascular tissue. The highly abundant d18:1,16:0 ceramide (C16) has been linked to increased cardiovascular mortality and obesity. In this study, we investigate the role of ceramide synthase 5 (CerS5), a critical enzyme for C16 ceramide synthesis, in the development of AVS, particularly in conjunction with a high-fat/high-cholesterol diet (Western diet, WD)...
March 28, 2024: Acta Physiologica
https://read.qxmd.com/read/38244710/identification-of-cers5-as-a-molecular-biomarker-in-pan-cancer-through-multiple-omics-integrative-analysis
#3
JOURNAL ARTICLE
Shengyu Wang, Jian Yang, Weijia Huang, Zhu Yu, Yuantian Mao, Yue Feng, Junqiang Chen
Cancer is a devastating disease that presents a major threat to human health. The protein CERS5 is responsible for synthesizing C16-ceramide, but its role in cancer is poorly understood. In this study, we examined the connection between CERS5 expression and pan-cancer prognosis, diagnosis, and the molecular mechanism involved. Kaplan-Meier survival analysis revealed variations among different cancer types. Functional enrichment analysis was conducted using gene set enrichment analysis (GSEA), and a network of protein-protein interaction (PPI) was constructed...
January 18, 2024: Cellular Signalling
https://read.qxmd.com/read/37802156/hypoxia-induced-deregulation-of-sphingolipids-in-colon-cancer-is-a-prognostic-marker-for-patient-outcome
#4
JOURNAL ARTICLE
Khadija El Hindi, Sebastian Brachtendorf, Jennifer C Hartel, Christoph Renné, Kerstin Birod, Karin Schilling, Sandra Labocha, Dominique Thomas, Nerea Ferreirós, Lisa Hahnefeld, Erika Dorochow, Domenico Del Turco, Thomas Deller, Klaus Scholich, Dominik C Fuhrmann, Andreas Weigert, Bernhard Brüne, Gerd Geisslinger, Ilka Wittig, Karl-Heinrich Link, Sabine Grösch
Sphingolipids are important for the physicochemical properties of cellular membranes and deregulated in tumors. In human colon cancer tissue ceramide synthase (CerS) 4 and CerS5 are reduced which correlates with a reduced survival probability of late-stage colon cancer patients. Both enzymes are reduced after hypoxia in advanced colorectal cancer (CRC) cells (HCT-116, SW620) but not in non-metastatic CRC cells (SW480, Caco-2). Downregulation of CerS4 or CerS5 in advanced CRC cells enhanced tumor formation in nude mice and organoid growth in vitro...
October 4, 2023: Biochimica et Biophysica Acta. Molecular Basis of Disease
https://read.qxmd.com/read/37488437/the-formation-of-migrasomes-is-initiated-by-the-assembly-of-sphingomyelin-synthase-2-foci-at-the-leading-edge-of-migrating-cells
#5
JOURNAL ARTICLE
Haisha Liang, Xinyu Ma, Yuanyuan Zhang, Yuheng Liu, Nan Liu, Weiying Zhang, Jianhui Chen, Boqi Liu, Wanqing Du, Xiaohui Liu, Li Yu
The migrasome is an organelle of migrating cells with diverse physiological functions. How migrasome formation is initiated is unknown. We found that sphingomyelin is enriched in migrasomes and identified sphingomyelin synthase 2 (SMS2) as an essential protein for migrasome biogenesis. SMS2 assembles into immobile foci that adhere on the basal membrane at the leading edge. When cells migrate away, the SMS2 foci 'move' out of cells and into retraction fibres, where they become migrasome formation sites and eventually grow into migrasomes...
August 2023: Nature Cell Biology
https://read.qxmd.com/read/37466006/ceramide-compensation-by-ceramide-synthases-preserves-retinal-function-and-structure-in-a-retinal-dystrophy-mouse-model
#6
JOURNAL ARTICLE
Xinye Qian, Tanmay Srinivasan, Jessica He, Jiaxiong Lu, Yan Jin, Haiwei Gu, Rui Chen
Increasing evidence has supported the role of ceramide as a mediator of photoreceptor dysfunction or cell death in ceramide accumulation and deficiency contexts. TLCD3B, a non-canonical ceramide synthase, was previously identified in addition to the six canonical ceramide synthases (CerSs), and the Tlcd3b-/- mouse model exhibited both retinal dysfunction and degeneration. As previous canonical CerS-deficient mouse models failed to display retinal degeneration, the mechanisms of how TLCD3B interacts with CerSs have not been investigated...
July 1, 2023: Disease Models & Mechanisms
https://read.qxmd.com/read/37298446/expression-of-ceramide-metabolizing-enzymes-in-the-heart-adipose-tissue-of-cardiovascular-disease-patients
#7
JOURNAL ARTICLE
Olga Gruzdeva, Yulia Dyleva, Ekaterina Belik, Evgenia Uchasova, Anastasia Ponasenko, Sergey Ivanov, Maxim Zinets, Alexander Stasev, Anton Kutikhin, Victoria Markova, Alena Poddubnyak, Evgenia Gorbatovskaya, Elena Fanaskova, Olga Barbarash
Here, we examined the expression of ceramide metabolism enzymes in the subcutaneous adipose tissue (SAT), epicardial adipose tissue (EAT) and perivascular adipose tissue (PVAT) of 30 patients with coronary artery disease (CAD) and 30 patients with valvular heart disease (VHD) by means of quantitative polymerase chain reaction and fluorescent Western blotting. The EAT of patients with CAD showed higher expression of the genes responsible for ceramide biosynthesis ( SPTLC1 , SPTLC2 , CERS1 , 5 , 6 , DEGS1 , and SMPD1 ) and utilization ( ASAH1 , SGMS1 )...
May 30, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/37216827/cers5-deficiency-promotes-liver-fibrosis-development-in-non-alcoholic-fatty-liver-disease
#8
JOURNAL ARTICLE
Jin Chen, Yanping Hao, Ping Xu, Dongxue Bian, Liang Han, Xudong Wu, Zhengjie Zhuang, Jianhua Wang, Yan Luo
BACKGROUND: Hepatocyte lipotoxicity mediated by sphingolipids was considered one of important factors in NAFLD development. Knocking out key enzymes for sphingolipids synthesis, such as DES-1, SPHK1 and CerS6, could reduce hepatocyte lipotoxicity and improve NAFLD progression. Previous studies showed that roles of CerS5 and CerS6 in sphingolipids metabolism were similar, but the role of CerS5 was controversial in NAFLD development. This study aimed to clarify the role and mechanism of CerS5 in NAFLD development...
May 16, 2023: Biochemical and Biophysical Research Communications
https://read.qxmd.com/read/37176017/risk-effects-of-rs1799945-polymorphism-of-the-hfe-gene-and-intergenic-interactions-of-gwas-significant-loci-for-arterial-hypertension-in-the-caucasian-population-of-central-russia
#9
JOURNAL ARTICLE
Tatiana Ivanova, Maria Churnosova, Maria Abramova, Irina Ponomarenko, Evgeny Reshetnikov, Inna Aristova, Inna Sorokina, Mikhail Churnosov
The aim of this case-control replicative study was to investigate the link between GWAS-impact for arterial hypertension (AH) and/or blood pressure (BP) gene polymorphisms and AH risk in Russian subjects (Caucasian population of Central Russia). AH (n = 939) and control (n = 466) cohorts were examined for ten GWAS AH/BP risk loci. The genotypes/alleles of these SNP and their combinations (SNP-SNP interactions) were tested for their association with the AH development using a logistic regression statistical procedure...
May 5, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/37175507/sex-specific-features-of-the-correlation-between-gwas-noticeable-polymorphisms-and-hypertension-in-europeans-of-russia
#10
JOURNAL ARTICLE
Tatiana Ivanova, Maria Churnosova, Maria Abramova, Denis Plotnikov, Irina Ponomarenko, Evgeny Reshetnikov, Inna Aristova, Inna Sorokina, Mikhail Churnosov
The aim of the study was directed at studying the sex-specific features of the correlation between genome-wide association studies (GWAS)-noticeable polymorphisms and hypertension (HTN). In two groups of European subjects of Russia ( n = 1405 in total), such as men ( n = 821 in total: n = 564 HTN, n = 257 control) and women ( n = 584 in total: n = 375 HTN, n = 209 control), the distribution of ten specially selected polymorphisms (they have confirmed associations of GWAS level with blood pressure (BP) parameters and/or HTN in Europeans) has been considered...
April 25, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/36237237/high-expression-of-ceramide-synthase-5-predicts-a-poor-prognosis-in-gastric-cancer
#11
JOURNAL ARTICLE
Shengjie Zhang, Yi Wang, Li Yuan, Can Hu, Zhiyuan Xu, Xiangdong Cheng
Background: Gastric cancer is one of the most common malignant tumors worldwide. Ceramide synthase 5 (CerS5) is a member of the CerS family. Emerging evidence has shown that overexpressed CerS5 is correlated with the poor prognosis of cancer patients. However, the role of CerS5 in gastric cancer remains unclear. The aim of this study is to delineate the relevance of CerS5 levels to gastric cancer. Methods: The expression level of CerS5 was determined by immunohistochemistry, and the survival data of gastric cancer patients were obtained by regular follow-up...
September 2022: Translational Cancer Research
https://read.qxmd.com/read/36219912/polymorphisms-of-hypertension-susceptibility-genes-as-a-risk-factors-of-preeclampsia-in-the-caucasian-population-of-central-russia
#12
JOURNAL ARTICLE
Mikhail Churnosov, Maria Abramova, Evgeny Reshetnikov, Igor V Lyashenko, Olesya Efremova, Maria Churnosova, Irina Ponomarenko
INTRODUCTION: The study was designed to assess the effects of hypertension (HT) susceptibility genes polymorphisms in the development of preeclampsia (PE) in Caucasians from Central Russia. METHODS: PE patients (n = 452) and women control group (n = 498) were genotyped for 10 polymorphisms of HT/blood pressure (BP) susceptibility genes (according to the previously published GWAS in Caucasian populations) including AC026703.1 (rs1173771), HFE (rs1799945), BAG6 (rs805303), PLCE1 (rs932764), OBFC1 (rs4387287), ARHGAP42 (rs633185), CERS5 (rs7302981), ATP2B1 (rs2681472), TBX2 (rs8068318) and RGL3 (rs167479)...
September 20, 2022: Placenta
https://read.qxmd.com/read/36210604/diterpenoid-dga-induces-apoptosis-via-endoplasmic-reticulum-stress-caused-by-changes-in-glycosphingolipid-composition-and-inhibition-of-stat3-in-glioma-cells
#13
JOURNAL ARTICLE
Tingting Kong, Zhenxue He, Shuying Wang, Chunxin Jiang, Fei Zhu, Jingjing Gao, Liu Li, Yanping Wang, Qing Xie, Yunsen Li
Glioma is one of the most common malignant primary brain tumors, with poor prognosis and high recurrence. There are currently few drugs approved for brain tumors; thus, it is necessary to develop new effective drugs. Natural diterpenoids have important biological activities, including antiinflammatory, antioxidative, and antitumor effects. In this study, 7α,14β-dihydroxy-ent-kaur-17-dimethylamino-3,15-dione (DGA), a diterpenoid compound modified from glaucocalyxin A, inhibited the proliferation of many tumor cells, especially glioma...
September 19, 2022: Biochemical Pharmacology
https://read.qxmd.com/read/35849604/generation-of-a-ceramide-synthase-6-mouse-lacking-the-ddrsdie-c-terminal-motif
#14
JOURNAL ARTICLE
Jiyoon Kim, Yael Pewzner-Jung, Tammar Joseph, Shifra Ben-Dor, Anthony H Futerman
The important membrane lipid, ceramide, is generated by a family of homologous enzymes, the ceramide synthases (CerSs), multi-spanning membrane proteins located in the endoplasmic reticulum. Six CerS isoforms exist in mammals with each using a subset of acyl-CoAs for (dihydro)ceramide synthesis. A number of mice have been generated in which one or other CerS has been genetically manipulated, including complete knock-outs, with each displaying phenotypes concomitant with the expression levels of the CerS in question and the presumed biological function of the ceramide species that it generates...
2022: PloS One
https://read.qxmd.com/read/35846357/development-of-a-novel-sphingolipid-signaling-pathway-related-risk-assessment-model-to-predict-prognosis-in-kidney-renal-clear-cell-carcinoma
#15
JOURNAL ARTICLE
Yonghao Sun, Yingkun Xu, Xiangyu Che, Guangzhen Wu
This study aimed to explore underlying mechanisms by which sphingolipid-related genes play a role in kidney renal clear cell carcinoma (KIRC) and construct a new prognosis-related risk model. We used a variety of bioinformatics methods and databases to complete our exploration. Based on the TCGA database, we used multiple R-based extension packages for data transformation, processing, and statistical analyses. First, on analyzing the CNV, SNV, and mRNA expression of 29 sphingolipid-related genes in various types of cancers, we found that the vast majority were protective in KIRC...
2022: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/35393526/an-amish-founder-population-reveals-rare-population-genetic-determinants-of-the-human-lipidome
#16
JOURNAL ARTICLE
May E Montasser, Stella Aslibekyan, Vinodh Srinivasasainagendra, Hemant K Tiwari, Amit Patki, Minoo Bagheri, Tobias Kind, Dinesh Kumar Barupal, Sili Fan, James Perry, Kathleen A Ryan, Alan R Shuldiner, Donna K Arnett, Amber L Beitelshees, Marguerite Ryan Irvin, Jeffrey R O'Connell
Identifying the genetic determinants of inter-individual variation in lipid species (lipidome) may provide deeper understanding and additional insight into the mechanistic effect of complex lipidomic pathways in CVD risk and progression beyond simple traditional lipids. Previous studies have been largely population based and thus only powered to discover associations with common genetic variants. Founder populations represent a powerful resource to accelerate discovery of previously unknown biology associated with rare population alleles that have risen to higher frequency due to genetic drift...
April 7, 2022: Communications Biology
https://read.qxmd.com/read/35053322/cers1-but-not-cers5-gene-silencing-improves-insulin-sensitivity-and-glucose-uptake-in-skeletal-muscle
#17
JOURNAL ARTICLE
Agnieszka U Błachnio-Zabielska, Kamila Roszczyc-Owsiejczuk, Monika Imierska, Karolina Pogodzińska, Paweł Rogalski, Jarosław Daniluk, Piotr Zabielski
Skeletal muscle is perceived as a major tissue in glucose and lipid metabolism. High fat diet (HFD) lead to the accumulation of intramuscular lipids, including: long chain acyl-CoA, diacylglycerols, and ceramides. Ceramides are considered to be one of the most important lipid groups in the generation of skeletal muscle insulin resistance. So far, it has not been clearly established whether all ceramides adversely affect the functioning of the insulin pathway, or whether there are certain ceramide species that play a pivotal role in the induction of insulin resistance...
January 8, 2022: Cells
https://read.qxmd.com/read/35053241/the-sphingolipid-asset-is-altered-in-the-nigrostriatal-system-of-mice-models-of-parkinson-s-disease
#18
JOURNAL ARTICLE
Victor Blokhin, Maria Shupik, Ulyana Gutner, Ekaterina Pavlova, Albert T Lebedev, Olga Maloshitskaya, Vsevolod Bogdanov, Sergey Sokolov, Alice Alessenko, Michael Ugrumov
Parkinson's disease (PD) is a neurodegenerative disease incurable due to late diagnosis and treatment. Therefore, one of the priorities of neurology is to study the mechanisms of PD pathogenesis at the preclinical and early clinical stages. Given the important role of sphingolipids in the pathogenesis of neurodegenerative diseases, we aimed to analyze the gene expression of key sphingolipid metabolism enzymes (ASAH1, ASAH2, CERS1, CERS3, CERS5, GBA1, SMPD1, SMPD2, UGCG) and the content of 32 sphingolipids (subspecies of ceramides, sphingomyelins, monohexosylceramides and sphinganine, sphingosine, and sphingosine-1-phosphate) in the nigrostriatal system in 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) mouse models of the preclinical and clinical stages of PD...
January 6, 2022: Biomolecules
https://read.qxmd.com/read/35005872/alteration-to-the-skin-ceramide-profile-following-broad-spectrum-uv-exposure
#19
JOURNAL ARTICLE
Rebecca Barresi, Hawasatu Dumbuya, I-Chien Liao, Ying Chen, Xi Yan, Janet Wangari-Olivero, Nada Baalbaki, Stephen Lynch, Patricia Brieva, Miao Wang, Qian Zheng, Charbel Bouez
The epidermal stratum corneum (SC) lipid matrix, principally consisting of an equimolar ratio of ceramides, free fatty acids, and cholesterol, plays a crucial role in maintaining proper skin barrier function. Conditions which impair barrier integrity, such as in atopic dermatitis, correlate with the alternation of key ceramide subclasses and reduced chain length of acyl moieties. However, there is limited knowledge about the impact of unprotected repeat sun exposure on the skin lipid composition, especially ceramide profiles...
January 1, 2022: Journal of Drugs in Dermatology: JDD
https://read.qxmd.com/read/34915026/dependence-of-abcb1-transporter-expression-and-function-on-distinct-sphingolipids-generated-by-ceramide-synthases-2-and-6-in-chemoresistant-renal-cancer
#20
JOURNAL ARTICLE
Wing-Kee Lee, Michelle Maaß, Amy Quach, Nataliya Poscic, Holly Prangley, Erin-Claire Pallott, Jiyoon L Kim, Jason S Pierce, Besim Ogretmen, Anthony H Futerman, Frank Thévenod
Oncogenic multidrug resistance is commonly intrinsic to renal cancer based on the physiological expression of detoxification transporters, particularly ABCB1, thus hampering chemotherapy. ABCB1 activity is directly dependent on its lipid microenvironment, localizing to cholesterol- and sphingomyelin (SM)-rich domains. As ceramides are the sole source for SMs, we hypothesized that ceramide synthase (CerS)-derived ceramides regulate ABCB1 activity. Using data from RNA-Seq databases, we found that patient kidney tumors exhibited increased CerS2 mRNA, which was inversely correlated with CerS6 mRNA in ABCB1+ clear cell carcinomas...
February 2022: Journal of Biological Chemistry
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