keyword
https://read.qxmd.com/read/38576313/temporal-dynamics-of-genetic-parameters-and-snp-effects-for-performance-and-disorder-traits-in-poultry-undergoing-genomic-selection
#1
JOURNAL ARTICLE
Jennifer Richter, Jorge Hidalgo, Fernando Bussiman, Vivian Breen, Ignacy Misztal, Daniela Lourenco
Accurate genetic parameters are crucial for predicting breeding values and selection responses in breeding programs. Genetic parameters change with selection, reducing additive genetic variance and changing genetic correlations. This study investigates the dynamic changes in genetic parameters for residual feed intake (RFI), gain (GAIN), breast percentage (BP), and femoral head necrosis (FHN) in a broiler population that undergoes selection, both with and without the use of genomic information. Changes in SNP effects were also investigated when including genomic information...
April 5, 2024: Journal of Animal Science
https://read.qxmd.com/read/38438571/detecting-stochastic-multiresonance-in-neural-networks-via-statistical-complexity-measure
#2
JOURNAL ARTICLE
Yazhen Wu, Zhongkui Sun
This paper employs statistical complexity measure (SCM) to investigate the occurrence of stochastic multiresonance (SMR) induced by noise and time delay in small-world neural networks coupled with FitzHugh-Nagumo (FHN) neurons. Our findings reveal that SCM exhibits four local maxima at four optimal noise levels, providing evidence for the occurrence of quadruple stochastic resonances. When time delay <mml:math xmlns:mml="https://www.w3.org/1998/Math/MathML"><mml:mi>τ</mml:mi></mml:math> is taken into account in the information transmission, under moderate noise levels, SCM shows several local maxima when <mml:math xmlns:mml="https://www...
March 4, 2024: Scientific Reports
https://read.qxmd.com/read/38381315/predicting-circrna-rbp-binding-sites-using-a-hybrid-deep-neural-network
#3
JOURNAL ARTICLE
Liwei Liu, Yixin Wei, Zhebin Tan, Qi Zhang, Jianqiang Sun, Qi Zhao
Circular RNAs (circRNAs) are non-coding RNAs generated by reverse splicing. They are involved in biological process and human diseases by interacting with specific RNA-binding proteins (RBPs). Due to traditional biological experiments being costly, computational methods have been proposed to predict the circRNA-RBP interaction. However, these methods have problems of single feature extraction. Therefore, we propose a novel model called circ-FHN, which utilizes only circRNA sequences to predict circRNA-RBP interactions...
February 21, 2024: Interdisciplinary Sciences, Computational Life Sciences
https://read.qxmd.com/read/38368258/self-assembly-of-heterogeneous-ferritin-nanocages-for-tumor-uptake-and-penetration
#4
JOURNAL ARTICLE
Qiqi Liu, Chunyu Wang, Mingsheng Zhu, Jinming Liu, Qiannan Duan, Adam C Midgley, Ruming Liu, Bing Jiang, Deling Kong, Quan Chen, Jie Zhuang, Xinglu Huang
Well-defined nanostructures are crucial for precisely understanding nano-bio interactions. However, nanoparticles (NPs) fabricated through conventional synthesis approaches often lack poor controllability and reproducibility. Herein, a synthetic biology-based strategy is introduced to fabricate uniformly reproducible protein-based NPs, achieving precise control over heterogeneous components of the NPs. Specifically, a ferritin assembly toolbox system is developed that enables intracellular assembly of ferritin subunits/variants in Escherichia coli...
February 17, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38019637/high-machting-and-low-cost-realization-of-the-fhn-neuron-model-on-reconfigurable-fpga-board
#5
JOURNAL ARTICLE
Yisu Ge, Ruyu Liu, Guodao Zhang, Mohammad Sh Daoud, Qiwen Zhang, Xuecai Huang, Abdulilah Mohammad Mayet, Zhao-Min Chen, Shike He
The main objectives of neuromorphic engineering are the research, modeling, and implementation of neural functioning in the human brain. We provide a hardware solution that can replicate such a nature-inspired system by merging multiple scientific domains and is based on neural cell processes. This work provides a modified version of the original Fitz-Hugh Nagumo (FHN) neuron using a simple 2V term called Hybrid Piece-Wised Base-2 Model (HPWBM), which accurately reproduces numerous patterns of the original neuron model...
November 29, 2023: IEEE Transactions on Biomedical Circuits and Systems
https://read.qxmd.com/read/37878421/floating-point-approximation-enabling-cost-effective-and-high-precision-digital-implementation-of-fitzhugh-nagumo-neural-networks
#6
JOURNAL ARTICLE
Y Zuo, N Ning, G C Qiao, J H Wu, J H Bao, X Y Zhang, J Bai, F H Wu, Y Liu, Q Yu, S G Hu
The study of neuron interactions and hardware implementations are crucial research directions in neuroscience, particularly in developing large-scale biological neural networks. The FitzHugh-Nagumo (FHN) model is a popular neuron model with highly biological plausibility, but its complexity makes it difficult to apply at scale. This paper presents a cost-saving and improved precision approximation algorithm for the digital implementation of the FHN model. By converting the computational data into floating-point numbers, the original multiplication calculations are replaced by adding the floating-point exponent part and fitting the mantissa part with piecewise linear...
October 25, 2023: IEEE Transactions on Biomedical Circuits and Systems
https://read.qxmd.com/read/37820665/impact-of-cholesterol-metabolism-on-h2o2-induced-oxidative-stress-injury-in-hepg2-cells-treated-with-fatty-acids
#7
JOURNAL ARTICLE
Qiao Tang, Li Du, Qian Sun
OBJECTIVE: This study aimed to evaluate the expression of genes involved in cholesterol metabolism and establish their association with oxidative stress (OS). METHODS: We employed an in vitro experimental design and cells were divided into six groups: C (control), CH (HepG2 + H2O2), CHN (HepG2 + H2O2 + NAC), F (FFA-treated HepG2), FH (FFA-treated HepG2 + H2O2), and FHN (FFA-treated HepG2 + H2O2 + NAC). Cell viability was assessed using the MTT assay, while successful FFA model establishment was confirmed via Oil Red staining and absorbance...
October 13, 2023: Alternative Therapies in Health and Medicine
https://read.qxmd.com/read/37790707/chimera-state-in-a-feed-forward-neuronal-network
#8
JOURNAL ARTICLE
Peihua Feng, Jiayi Yang, Ying Wu
Feed-forward effect gives rise to synchronization in neuron firing in deep layers of multiple neuronal network. But complete synchronization means the loss of encoding ability. In order to avoid the contradiction, we ask whether partial synchronization (coexistence of disordered and synchronized neuron firing emerges, also called chimera state) as a compromise strategy can achieve in the feed-forward multiple-layer network. The answer is YES. In order to manifest our argument, we design a multi-layer neuronal network in which neurons in every layer are arranged in a ring topology and neuron firing propagates within (intra-) and across (inter-) the multiply layers...
October 2023: Cognitive Neurodynamics
https://read.qxmd.com/read/37776501/gc-ms-based-comparative-metabolomic-analysis-of-human-cancellous-bone-reveals-the-critical-role-of-linoleic-acid-metabolism-in-femur-head-necrosis
#9
JOURNAL ARTICLE
Weiwen Zhu, Rui Wang, Zhijian Yang, Xuming Luo, Baoxi Yu, Jian Zhang, Ming Fu
INTRODUCTION: Femur head necrosis (FHN) is a challenging clinical disease with unclear underlying mechanism, which pathologically is associated with disordered metabolism. However, the disordered metabolism in cancellous bone of FHN was never analyzed by gas chromatography-mass spectrometry (GC-MS). OBJECTIVES: To elucidate altered metabolism pathways in FHN and identify putative biomarkers for the detection of FHN. METHODS: We recruited 26 patients with femur head necrosis and 22 patients with femur neck fracture in this study...
September 30, 2023: Metabolomics: Official Journal of the Metabolomic Society
https://read.qxmd.com/read/37585739/comparison-of-two-joint-preserving-treatments-for-osteonecrosis-of-the-femoral-head-core-decompression-and-core-decompression-with-additional-cancellous-bone-grafting
#10
JOURNAL ARTICLE
Michael Woerner, Korbinian Voelkl, Christopher Bliemel, Felix Ferner, Markus Weber, Tobias Renkawitz, Joachim Grifka, Benjamin Craiovan
OBJECTIVE: Femoral head necrosis (FHN) affects mostly young and active people. The most common operative therapy is core decompression (CD) with optional cancellous bone grafting (CBG). Because little information is available on the long-term results of these procedures, we investigated the effectiveness of CD and CD + CBG in patients with ARCO stage II FHN in terms of postoperative pain, range of motion, patient-reported outcome measures (Harris Hip Score, Hip Disability and Osteoarthritis Outcome Score, EuroQol 5D, and Short Form 36 Questionnaire), and disease progression...
August 2023: Journal of International Medical Research
https://read.qxmd.com/read/37508349/non-trivial-dynamics-in-the-fizhugh-rinzel-model-and-non-homogeneous-oscillatory-excitable-reaction-diffusions-systems
#11
JOURNAL ARTICLE
Benjamin Ambrosio, M A Aziz-Alaoui, Argha Mondal, Arnab Mondal, Sanjeev K Sharma, Ranjit Kumar Upadhyay
This article focuses on the qualitative analysis of complex dynamics arising in a few mathematical models in neuroscience context. We first discuss the dynamics arising in the three-dimensional FitzHugh-Rinzel (FHR) model and then illustrate those arising in a class of non-homogeneous FitzHugh-Nagumo (Nh-FHN) reaction-diffusion systems. FHR and Nh-FHN models can be used to generate relevant complex dynamics and wave-propagation phenomena in neuroscience context. Such complex dynamics include canards, mixed-mode oscillations (MMOs), Hopf-bifurcations and their spatially extended counterpart...
June 27, 2023: Biology
https://read.qxmd.com/read/37493355/convergent-validity-of-2-widely-used-methodologies-for-calculating-the-hospital-standardized-mortality-ratio-in-flanders-belgium
#12
JOURNAL ARTICLE
Bianca Cox, Astrid Van Wilder, Dirk De Ridder, Wim Tambeur, Pieter Maertens, Pieter Stijnen, Wouter Voorspoels, Guy Vanden Boer, Luk Bruyneel, Kris Vanhaecht
OBJECTIVES: To assess their construct validity, we compared results from 2 models used for estimating hospital standardized mortality ratios (HSMRs) in Belgium. The method of the Flemish Hospital Network (FHN) is based on a logistic regression for each of the 64 All Patient Refined Diagnosis-Related Groups that explain 80% of mortality and uses the Elixhauser score to correct for comorbidities. (H)SMRs published on the 3M-Benchmark-Portal are calculated by a simpler indirect standardization for All Patient Refined Diagnosis-Related Groups and risk of mortality (ROM) at discharge...
July 21, 2023: Journal of Patient Safety
https://read.qxmd.com/read/37486584/energy-computation-and-multiplier-less-implementation-of-the-two-dimensional-fitzhugh-nagumo-fhn-neural-circuit
#13
JOURNAL ARTICLE
Zeric Tabekoueng Njitacke, Gokul Sriram, Karthikeyan Rajagopal, Anitha Karthikeyan, Jan Awrejcewicz
In this work, with the aim of reducing the cost of the implementation of the traditional 2D FHN neuron circuit, a pair of diodes connected in an anti-parallel direction is used to replace the usual cubic nonlinearity (implemented with two multipliers). Based on the stability of the model, the generation of self-excited firing patterns is justified. Making use of the famous Helmholtz theorem, a Hamilton function is provided for the estimation of the energy released during each electrical activity of the model...
July 24, 2023: European Physical Journal. E, Soft Matter
https://read.qxmd.com/read/37433657/symbiosis-of-an-artificial-neural-network-and-models-of-biological-neurons-training-and-testing
#14
JOURNAL ARTICLE
Tatyana Bogatenko, Konstantin Sergeev, Andrei Slepnev, Jürgen Kurths, Nadezhda Semenova
In this paper, we show the possibility of creating and identifying the features of an artificial neural network (ANN), which consists of mathematical models of biological neurons. The FitzHugh-Nagumo (FHN) system is used as a paradigmatic model demonstrating basic neuron activities. First, in order to reveal how biological neurons can be embedded within an ANN, we train the ANN with nonlinear neurons to solve a basic image recognition problem with an MNIST database; next, we describe how FHN systems can be introduced into this trained ANN...
July 1, 2023: Chaos
https://read.qxmd.com/read/37248613/research-on-constrained-localization-of-ultrasound-geometric-distribution-based-on-fhn-neurons
#15
JOURNAL ARTICLE
Weiwei Li, Sen Yuan, Zhou Xiaorong, Long Qin, Yue Xi
The autopilot positioning process is mainly affected by three aspects: the first is the spatial geometric distribution of positioning sensors; the second is the screening of spurious observations; and the third is the equivalent ranging error. A constrained positioning method based on the geometric distribution of FitzHugh-Nagumo (FHN) neurons is proposed. To reduce the geometric accuracy factor, a Horizontal Dilution Of Precision value algorithm with a weight factor was proposed by considering the spatial geometric distribution of base stations and the geometric relationship of anchor points...
2023: Science Progress
https://read.qxmd.com/read/37233703/bone-metabolite-profile-differs-between-normal-and-femur-head-necrosis-fhn-bco-affected-broilers-implications-for-dysregulated-metabolic-cascades-in-fhn-pathophysiology
#16
JOURNAL ARTICLE
Alison Ramser, Rachel Hawken, Elizabeth Greene, Ron Okimoto, Brenda Flack, Courtney J Christopher, Shawn R Campagna, Sami Dridi
Femur head necrosis (FHN), also known as bacterial chondronecrosis with osteomyelitis (BCO), has remained an animal welfare and production concern for modern broilers regardless of efforts to select against it in primary breeder flocks. Characterized by the bacterial infection of weak bone, FHN has been found in birds without clinical lameness and remains only detectable via necropsy. This presents an opportunity to utilize untargeted metabolomics to elucidate potential non-invasive biomarkers and key causative pathways involved in FHN pathology...
May 16, 2023: Metabolites
https://read.qxmd.com/read/37051165/turing-instability-mechanism-of-short-memory-formation-in-multilayer-fitzhugh-nagumo-network
#17
JOURNAL ARTICLE
Junjie Wang, Jianwei Shen
INTRODUCTION: The study of brain function has been favored by scientists, but the mechanism of short-term memory formation has yet to be precise. RESEARCH PROBLEM: Since the formation of short-term memories depends on neuronal activity, we try to explain the mechanism from the neuron level in this paper. RESEARCH CONTENTS AND METHODS: Due to the modular structures of the brain, we analyze the pattern properties of the FitzHugh-Nagumo model (FHN) on a multilayer network (coupled by a random network)...
2023: Frontiers in Psychiatry
https://read.qxmd.com/read/37047268/notch-rbpj-pathway-for-the-differentiation-of-bone-marrow-mesenchymal-stem-cells-in-femoral-head-necrosis
#18
JOURNAL ARTICLE
Kangping Liu, Hongfan Ge, Chengyin Liu, Yixin Jiang, Yaling Yu, Zhenlei Zhou
Femoral head necrosis (FHN) is a common leg disease in broilers, resulting in economic losses in the poultry industry. The occurrence of FHN is closely related to the decrease in the number of bone marrow mesenchymal stem cells (BMSCs) and the change in differentiation direction. This study aimed to investigate the function of differentiation of BMSCs in the development of FHN. We isolated and cultured BMSCs from spontaneous FHN-affected broilers and normal broilers, assessed the ability of BMSCs into three lineages by multiple staining methods, and found that BMSCs isolated from FHN-affected broilers demonstrated enhanced lipogenic differentiation, activated Notch-RBPJ signaling pathway, and diminished osteogenic and chondrogenic differentiation...
March 27, 2023: International Journal of Molecular Sciences
https://read.qxmd.com/read/36725631/double-resonance-induced-by-group-coupling-with-quenched-disorder
#19
JOURNAL ARTICLE
Cong Liu, Zhi-Xi Wu, Chong-Yang Wang, Han-Xin Yang, Jian-Yue Guan
Results show that the astrocytes can not only listen to the talk of large assemble of neurons but also give advice to the conversations and are significant sources of heterogeneous couplings as well. In the present work, we focus on such regulation character of astrocytes and explore the role of heterogeneous couplings among interacted neuron-astrocyte components in a signal response. We consider reduced dynamics in which the listening and advising processes of astrocytes are mapped into the form of group coupling, where the couplings are normally distributed...
January 2023: Chaos
https://read.qxmd.com/read/36675814/a-deep-learning-method-for-quantification-of-femoral-head-necrosis-based-on-routine-hip-mri-for-improved-surgical-decision-making
#20
JOURNAL ARTICLE
Adrian C Ruckli, Andreas K Nanavati, Malin K Meier, Till D Lerch, Simon D Steppacher, Sébastian Vuilleumier, Adam Boschung, Nicolas Vuillemin, Moritz Tannast, Klaus A Siebenrock, Nicolas Gerber, Florian Schmaranzer
(1) Background : To evaluate the performance of a deep learning model to automatically segment femoral head necrosis (FHN) based on a standard 2D MRI sequence compared to manual segmentations for 3D quantification of FHN. (2) Methods : Twenty-six patients (thirty hips) with avascular necrosis underwent preoperative MR arthrography including a coronal 2D PD-w sequence and a 3D T1 VIBE sequence. Manual ground truth segmentations of the necrotic and unaffected bone were then performed by an expert reader to train a self-configuring nnU-Net model...
January 12, 2023: Journal of Personalized Medicine
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