journal
https://read.qxmd.com/read/38429580/author-correction-toll-like-receptor-9-protects-non-immune-cells-from-stress-by-modulating-mitochondrial-atp-synthesis-through-the-inhibition-of-serca2
#41
Yasunori Shintani, Hannes Ca Drexler, Hidetaka Kioka, Cesare Mn Terracciano, Steven R Coppen, Hiromi Imamura, Masaharu Akao, Junichi Nakai, Ann P Wheeler, Shuichiro Higo, Hiroyuki Nakayama, Seiji Takashima, Kenta Yashiro, Ken Suzuki
No abstract text is available yet for this article.
March 1, 2024: EMBO Reports
https://read.qxmd.com/read/38429579/phf6-mediated-transcriptional-control-of-nsc-via-ephrin-receptors-is-impaired-in-the-intellectual-disability-syndrome-bfls
#42
JOURNAL ARTICLE
Dilan Rasool, Audrey Burban, Ahmad Sharanek, Ariel Madrigal, Jinghua Hu, Keqin Yan, Dianbo Qu, Anne K Voss, Ruth S Slack, Tim Thomas, Azad Bonni, David J Picketts, Vahab D Soleimani, Hamed S Najafabadi, Arezu Jahani-Asl
The plant homeodomain zinc-finger protein, PHF6, is a transcriptional regulator, and PHF6 germline mutations cause the X-linked intellectual disability (XLID) Börjeson-Forssman-Lehmann syndrome (BFLS). The mechanisms by which PHF6 regulates transcription and how its mutations cause BFLS remain poorly characterized. Here, we show genome-wide binding of PHF6 in the developing cortex in the vicinity of genes involved in central nervous system development and neurogenesis. Characterization of BFLS mice harbouring PHF6 patient mutations reveals an increase in embryonic neural stem cell (eNSC) self-renewal and a reduction of neural progenitors...
March 1, 2024: EMBO Reports
https://read.qxmd.com/read/38429578/mitochondrial-fusion-and-altered-beta-oxidation-drive-muscle-wasting-in-a-drosophila-cachexia-model
#43
JOURNAL ARTICLE
Callum Dark, Nashia Ali, Sofya Golenkina, Vaibhav Dhyani, Ronnie Blazev, Benjamin L Parker, Kate T Murphy, Gordon S Lynch, Tarosi Senapati, S Sean Millard, Sarah M Judge, Andrew R Judge, Lopamudra Giri, Sarah M Russell, Louise Y Cheng
Cancer cachexia is a tumour-induced wasting syndrome, characterised by extreme loss of skeletal muscle. Defective mitochondria can contribute to muscle wasting; however, the underlying mechanisms remain unclear. Using a Drosophila larval model of cancer cachexia, we observed enlarged and dysfunctional muscle mitochondria. Morphological changes were accompanied by upregulation of beta-oxidation proteins and depletion of muscle glycogen and lipid stores. Muscle lipid stores were also decreased in Colon-26 adenocarcinoma mouse muscle samples, and expression of the beta-oxidation gene CPT1A was negatively associated with muscle quality in cachectic patients...
March 1, 2024: EMBO Reports
https://read.qxmd.com/read/38429577/addendum-usp3-plays-a-critical-role-in-the-induction-of-innate-immune-tolerance
#44
JOURNAL ARTICLE
Tianhao Duan, Yanchun Feng, Yang Du, Changsheng Xing, Junjun Chu, Jiayu Ou, Xin Liu, Motao Zhu, Chen Qian, Bingnan Yin, Helen Y Wang, Jun Cui, Rong-Fu Wang
No abstract text is available yet for this article.
March 1, 2024: EMBO Reports
https://read.qxmd.com/read/38424231/ckap5-stabilizes-cenp-e-at-kinetochores-by-regulating-microtubule-chromosome-attachments
#45
JOURNAL ARTICLE
R Bhagya Lakshmi, Pinaki Nayak, Linoy Raz, Apurba Sarkar, Akshay Saroha, Pratibha Kumari, Vishnu M Nair, Delvin P Kombarakkaran, S Sajana, Sanusha M G, Sarit S Agasti, Raja Paul, Uri Ben-David, Tapas K Manna
Stabilization of microtubule plus end-directed kinesin CENP-E at the metaphase kinetochores is important for chromosome alignment, but its mechanism remains unclear. Here, we show that CKAP5, a conserved microtubule plus tip protein, regulates CENP-E at kinetochores in human cells. Depletion of CKAP5 impairs CENP-E localization at kinetochores at the metaphase plate and results in increased kinetochore-microtubule stability and attachment errors. Erroneous attachments are also supported by computational modeling...
February 29, 2024: EMBO Reports
https://read.qxmd.com/read/38424230/mtert-induction-in-p21-positive-cells-counteracts-capillary-rarefaction-and-pulmonary-emphysema
#46
JOURNAL ARTICLE
Larissa Lipskaia, Marielle Breau, Christelle Cayrou, Dmitri Churikov, Laura Braud, Juliette Jacquet, Emmanuelle Born, Charles Fouillade, Sandra Curras-Alonso, Serge Bauwens, Frederic Jourquin, Frederic Fiore, Rémy Castellano, Emmanuelle Josselin, Carlota Sánchez-Ferrer, Giovanna Giovinazzo, Christophe Lachaud, Eric Gilson, Ignacio Flores, Arturo Londono-Vallejo, Serge Adnot, Vincent Géli
Lung diseases develop when telomeres shorten beyond a critical point. We constructed a mouse model in which the catalytic subunit of telomerase (mTert), or its catalytically inactive form (mTertCI ), is expressed from the p21Cdkn1a locus. Expression of either TERT or TERTCI reduces global p21 levels in the lungs of aged mice, highlighting TERT non-canonical function. However, only TERT reduces accumulation of very short telomeres, oxidative damage, endothelial cell (ECs) senescence and senile emphysema in aged mice...
February 29, 2024: EMBO Reports
https://read.qxmd.com/read/38418692/how-autoimmune-antibodies-kindle-a-firestorm-in-the-brain
#47
JOURNAL ARTICLE
Johannes W Hell
No abstract text is available yet for this article.
February 28, 2024: EMBO Reports
https://read.qxmd.com/read/38413734/a-neuroligin-2-yap-axis-regulates-progression-of-pancreatic-intraepithelial-neoplasia
#48
JOURNAL ARTICLE
Emanuele Middonti, Elena Astanina, Edoardo Vallariello, Roxana Maria Hoza, Jasna Metovic, Rosella Spadi, Carmen Cristiano, Mauro Papotti, Paola Allavena, Francesco Novelli, Sushant Parab, Paola Cappello, Aldo Scarpa, Rita Lawlor, Massimo Di Maio, Marco Arese, Federico Bussolino
Pancreatic ductal adenocarcinoma (PDAC) is a tumor with a dismal prognosis that arises from precursor lesions called pancreatic intraepithelial neoplasias (PanINs). Progression from low- to high-grade PanINs is considered as tumor initiation, and a deeper understanding of this switch is needed. Here, we show that synaptic molecule neuroligin-2 (NLGN2) is expressed by pancreatic exocrine cells and plays a crucial role in the regulation of contact inhibition and epithelial polarity, which characterize the switch from low- to high-grade PanIN...
February 27, 2024: EMBO Reports
https://read.qxmd.com/read/38413733/n4-acetylcytidine-ac4c-promotes-mrna-localization-to-stress-granules
#49
JOURNAL ARTICLE
Pavel Kudrin, Ankita Singh, David Meierhofer, Anna Kuśnierczyk, Ulf Andersson Vang Ørom
Stress granules are an integral part of the stress response that are formed from non-translating mRNAs aggregated with proteins. While much is known about stress granules, the factors that drive their mRNA localization are incompletely described. Modification of mRNA can alter the properties of the nucleobases and affect processes such as translation, splicing and localization of individual transcripts. Here, we show that the RNA modification N4-acetylcytidine (ac4C) on mRNA associates with transcripts enriched in stress granules and that stress granule localized transcripts with ac4C are specifically translationally regulated...
February 27, 2024: EMBO Reports
https://read.qxmd.com/read/38413732/hyperfunction-of-post-synaptic-density-protein-95-promotes-seizure-response-in-early-stage-a%C3%AE-pathology
#50
JOURNAL ARTICLE
Yeeun Yook, Kwan Young Lee, Eunyoung Kim, Simon Lizarazo, Xinzhu Yu, Nien-Pei Tsai
Accumulation of amyloid-beta (Aβ) can lead to the formation of aggregates that contribute to neurodegeneration in Alzheimer's disease (AD). Despite globally reduced neural activity during AD onset, recent studies have suggested that Aβ induces hyperexcitability and seizure-like activity during the early stages of the disease that ultimately exacerbate cognitive decline. However, the underlying mechanism is unknown. Here, we reveal an Aβ-induced elevation of postsynaptic density protein 95 (PSD-95) in cultured neurons in vitro and in an in vivo AD model using APP/PS1 mice at 8 weeks of age...
February 27, 2024: EMBO Reports
https://read.qxmd.com/read/38409269/gli1-labels-progenitors-during-chondrogenesis-in-postnatal-mice
#51
JOURNAL ARTICLE
Boer Li, Puying Yang, Fangyuan Shen, Chengjia You, Fanzi Wu, Yu Shi, Ling Ye
Skeletal growth promoted by endochondral ossification is tightly coordinated by self-renewal and differentiation of chondrogenic progenitors. Emerging evidence has shown that multiple skeletal stem cells (SSCs) participate in cartilage formation. However, as yet, no study has reported the existence of common long-lasting chondrogenic progenitors in various types of cartilage. Here, we identify Gli1+ chondrogenic progenitors (Gli1+ CPs), which are distinct from PTHrP+ or FoxA2+ SSCs, are responsible for the lifelong generation of chondrocytes in the growth plate, vertebrae, ribs, and other cartilage...
February 26, 2024: EMBO Reports
https://read.qxmd.com/read/38396206/torc1-is-an-essential-regulator-of-nutrient-controlled-proliferation-and-differentiation-in-leishmania
#52
JOURNAL ARTICLE
Elmarie Myburgh, Vincent Geoghegan, Eliza Vc Alves-Ferreira, Y Romina Nievas, Jaspreet S Grewal, Elaine Brown, Karen McLuskey, Jeremy C Mottram
Leishmania parasites undergo differentiation between various proliferating and non-dividing forms to adapt to changing host environments. The mechanisms that link environmental cues with the parasite's developmental changes remain elusive. Here, we report that Leishmania TORC1 is a key environmental sensor for parasite proliferation and differentiation in the sand fly-stage promastigotes and for replication of mammalian-stage amastigotes. We show that Leishmania RPTOR1, interacts with TOR1 and LST8, and identify new parasite-specific proteins that interact in this complex...
February 23, 2024: EMBO Reports
https://read.qxmd.com/read/38388694/getting-real-about-synthetic-data-ethics-are-ai-ethics-principles-a-good-starting-point-for-synthetic-data-ethics
#53
JOURNAL ARTICLE
Danielle Shanley, Joshi Hogenboom, Flora Lysen, Leonard Wee, Aiara Lobo Gomes, Andre Dekker, Darian Meacham
No abstract text is available yet for this article.
February 22, 2024: EMBO Reports
https://read.qxmd.com/read/38383861/ire1-rnase-controls-cd95-mediated-cell-death
#54
JOURNAL ARTICLE
Diana Pelizzari-Raymundo, Victoria Maltret, Manon Nivet, Raphael Pineau, Alexandra Papaioannou, Xingchen Zhou, Flavie Caradec, Sophie Martin, Matthieu Le Gallo, Tony Avril, Eric Chevet, Elodie Lafont
Signalling by the Unfolded Protein Response (UPR) or by the Death Receptors (DR) are frequently activated towards pro-tumoral outputs in cancer. Herein, we demonstrate that the UPR sensor IRE1 controls the expression of the DR CD95/Fas, and its cell death-inducing ability. Both genetic and pharmacologic blunting of IRE1 activity increased CD95 expression and exacerbated CD95L-induced cell death in glioblastoma (GB) and Triple-Negative Breast Cancer (TNBC) cell lines. In accordance, CD95 mRNA was identified as a target of Regulated IRE1-Dependent Decay of RNA (RIDD)...
February 21, 2024: EMBO Reports
https://read.qxmd.com/read/38374203/author-correction-mitochondrial-f-1-f-o-atp-synthase-determines-the-local-proton-motive-force-at-cristae-rims
#55
Bettina Rieger, Tasnim Arroum, Marie-Theres Borowski, Jimmy Villalta, Karin B Busch
No abstract text is available yet for this article.
February 19, 2024: EMBO Reports
https://read.qxmd.com/read/38374202/can-you-keep-up-the-challenges-for-research-institutes-and-core-facilities-in-scouting-and-adopting-new-technologies
#56
JOURNAL ARTICLE
Geert Van Minnebruggen, Saskia Lippens
No abstract text is available yet for this article.
February 19, 2024: EMBO Reports
https://read.qxmd.com/read/38366256/author-correction-apc-c-dependent-degradation-of-spd2-regulates-centrosome-asymmetry-in-drosophila-neural-stem-cells
#57
Francesco Meghini, Torcato Martins, Qian Zhang, Nicolas Loyer, Michelle Trickey, Yusanjiang Abula, Hiroyuki Yamano, Jens Januschke, Yuu Kimata
No abstract text is available yet for this article.
February 16, 2024: EMBO Reports
https://read.qxmd.com/read/38366255/tumor-acidosis-induced-dna-damage-response-and-tetraploidy-enhance-sensitivity-to-atm-and-atr-inhibitors
#58
JOURNAL ARTICLE
Léo Aubert, Estelle Bastien, Ophélie Renoult, Céline Guilbaud, Kübra Özkan, Davide Brusa, Caroline Bouzin, Elena Richiardone, Corentin Richard, Romain Boidot, Daniel Léonard, Cyril Corbet, Olivier Feron
Tumor acidosis is associated with increased invasiveness and drug resistance. Here, we take an unbiased approach to identify vulnerabilities of acid-exposed cancer cells by combining pH-dependent flow cytometry cell sorting from 3D colorectal tumor spheroids and transcriptomic profiling. Besides metabolic rewiring, we identify an increase in tetraploid cell frequency and DNA damage response as consistent hallmarks of acid-exposed cancer cells, supported by the activation of ATM and ATR signaling pathways. We find that regardless of the cell replication error status, both ATM and ATR inhibitors exert preferential growth inhibitory effects on acid-exposed cancer cells...
February 16, 2024: EMBO Reports
https://read.qxmd.com/read/38351373/regulatory-sites-of-cam-sensitive-adenylyl-cyclase-ac8-revealed-by-cryo-em-and-structural-proteomics
#59
JOURNAL ARTICLE
Basavraj Khanppnavar, Dina Schuster, Pia Lavriha, Federico Uliana, Merve Özel, Ved Mehta, Alexander Leitner, Paola Picotti, Volodymyr M Korkhov
Membrane adenylyl cyclase AC8 is regulated by G proteins and calmodulin (CaM), mediating the crosstalk between the cAMP pathway and Ca2+ signalling. Despite the importance of AC8 in physiology, the structural basis of its regulation by G proteins and CaM is not well defined. Here, we report the 3.5 Å resolution cryo-EM structure of the bovine AC8 bound to the stimulatory Gαs protein in the presence of Ca2+ /CaM. The structure reveals the architecture of the ordered AC8 domains bound to Gαs and the small molecule activator forskolin...
February 13, 2024: EMBO Reports
https://read.qxmd.com/read/38351372/xiap-mediated-degradation-of-ift88-disrupts-hsc-cilia-to-stimulate-hsc-activation-and-liver-fibrosis
#60
JOURNAL ARTICLE
Renjie Hong, Yanjie Tan, Xiaoyu Tian, Zhenzhou Huang, Jiaying Wang, Hua Ni, Jia Yang, Weiwen Bu, Song Yang, Te Li, Fan Yu, Weilong Zhong, Tao Sun, Xiaohong Wang, Dengwen Li, Min Liu, Yunfan Yang, Jun Zhou
Activation of hepatic stellate cells (HSCs) plays a critical role in liver fibrosis. However, the molecular basis for HSC activation remains poorly understood. Herein, we demonstrate that primary cilia are present on quiescent HSCs but exhibit a significant loss upon HSC activation which correlates with decreased levels of the ciliary protein intraflagellar transport 88 (IFT88). Ift88-knockout mice are more susceptible to chronic carbon tetrachloride-induced liver fibrosis. Mechanistic studies show that the X-linked inhibitor of apoptosis (XIAP) functions as an E3 ubiquitin ligase for IFT88...
February 13, 2024: EMBO Reports
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