keyword
https://read.qxmd.com/read/38611328/investigation-of-the-microbiome-of-industrial-pdo-sfela-cheese-and-its-artisanal-variants-using-16s-rdna-amplicon-sequencing-and-shotgun-metagenomics
#41
JOURNAL ARTICLE
Natalia Tsouggou, Aleksandra Slavko, Olympia Tsipidou, Anastasios Georgoulis, Svetoslav G Dimov, Jia Yin, Constantinos E Vorgias, John Kapolos, Marina Papadelli, Konstantinos Papadimitriou
Sfela is a white brined Greek cheese of protected designation of origin (PDO) produced in the Peloponnese region from ovine, caprine milk, or a mixture of the two. Despite the PDO status of Sfela, very few studies have addressed its properties, including its microbiology. For this reason, we decided to investigate the microbiome of two PDO industrial Sfela cheese samples along with two non-PDO variants, namely Sfela touloumotiri and Xerosfeli. Matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS), 16S rDNA amplicon sequencing and shotgun metagenomics analysis were used to identify the microbiome of these traditional cheeses...
March 27, 2024: Foods (Basel, Switzerland)
https://read.qxmd.com/read/38609267/developing-a-novel-strategy-for-fabricating-matrix-film-to-assess-the-distribution-of-potassium-perfluorooctanic-sulfonate-by-matrix-assisted-laser-desorption-ionization-mass-spectrometry-imaging
#42
JOURNAL ARTICLE
Yake Luo, Shanshan Ma, Jianxun Zhang, Qidong Zhang, Yanhao Zhang, Jian Mao, Hang Yuan, Gangfeng Ouyang, Shusheng Zhang, Wuduo Zhao
Matrix deposition plays a critical role in image quality of matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI-MSI). To improve the ionization efficiency and overcome the limitation of traditional matrix deposition methods in the face of difficult-to-sublimate or difficult-to-dissolve matrix, covalent organic frameworks (COFs) named COF-DhaTab was successfully synthesized and firstly used as matrix film. It was fabricated by imprinting of sieved COF-DhaTab powder on the surface of a double-sided adhesive tape...
May 15, 2024: Analytica Chimica Acta
https://read.qxmd.com/read/38609208/unravelling-inulin-molecules-in-food-sources-using-a-matrix-assisted-laser-desorption-ionization-magnetic-resonance-mass-spectrometry-maldi-mrms-pipeline
#43
JOURNAL ARTICLE
Sung-Tong Chin, Berin A Boughton, Melvin C L Gay, Alyce C Russell, Yimin Wang, Vimalnath Nambiar, Mark P McHenry, Elaine Holmes, Jeremy K Nicholson, Ruey Leng Loo
Inulin, a polysaccharide characterized by a β-2,1 fructosyl-fructose structure terminating in a glucosyl moiety, is naturally present in plant roots and tubers. Current methods provide average degrees of polymerization (DP) but lack information on the distribution and absolute concentration of each DP. To address this limitation, a reproducible (CV < 10 %) high throughput (<2 min/sample) MALDI-MRMS approach capable of characterizing and quantifying inulin molecules in plants using matched-matrix consisting of α-cyano-4-hydroxycinnamic acid butylamine salt (CHCA-BA), chicory inulin-12 C and inulin-13 C was developed...
May 2024: Food Research International
https://read.qxmd.com/read/38607383/an-amino-rich-polymer-coated-magnetic-nanomaterial-for-ultra-rapid-separation-of-phosphorylated-peptides-in-the-serum-of-parkinson-s-disease-patients
#44
JOURNAL ARTICLE
Xiaoya Zhang, Bing Wang, Yiting Luo, Chuan-Fan Ding, Yinghua Yan
The elucidation of disease pathogenesis can be achieved by analyzing the low-abundance phosphopeptides in organisms. Herein, we developed a novel and easy-to-prepare polymer-coated nanomaterial. By improving the hydrophilicity and spatial conformation of the material, we effectively enhanced the adsorption of phosphopeptides and demonstrated excellent enrichment properties. The material was able to successfully enrich the phosphopeptides in only 1 min. Meanwhile, the material has high selectivity (1:2000), good loading capacity (100 μg/mg), excellent sensitivity (0...
April 12, 2024: Analytical and Bioanalytical Chemistry
https://read.qxmd.com/read/38604028/lc-ms-and-maldi-msi-based-metabolomic-approaches-provide-insights-into-the-spatial-temporal-metabolite-profiles-of-tartary-buckwheat-achene-development
#45
JOURNAL ARTICLE
Tingxia Liu, Peng Wang, Yiling Chen, Boshi Sun, Qing Li, Huihua Wan, Wei Yang, Pengda Ma, Dong Zhang, Gangqiang Dong, Shilin Chen, Qingfu Chen, Wei Ma, Wei Sun
Tartary buckwheat, celebrated as the "king of grains" for its flavonoid and phenolic acid richness, has health-promoting properties. Despite significant morphological and metabolic variations in mature achenes, research on their developmental process is limited. Utilizing Liquid chromatography-mass spectrometry and atmospheric pressure matrix-assisted laser desorption/ionization mass spectrometry imaging, we conducted spatial-temporal metabolomics on two cultivars during achene development. Metabolic profiles including 17 phenolic acids and 83 flavonoids are influenced by both varietal distinctions and developmental intricacies...
March 30, 2024: Food Chemistry
https://read.qxmd.com/read/38602440/lipid-related-ion-suppression-on-the-herbicide-atrazine-in-earthworm-samples-in-tof-sims-and-matrix-assisted-laser-desorption-ionization-mass-spectrometry-imaging-and-the-role-of-gas-phase-basicity
#46
JOURNAL ARTICLE
Timo Weintraut, Sven Heiles, Dennis Gerbig, Anja Henss, Johannes Junck, Rolf-Alexander Düring, Marcus Rohnke
In mass spectrometry imaging (MSI), ion suppression can lead to a misinterpretation of results. Particularly phospholipids, most of which exhibit high gas-phase basicity (GB), are known to suppress the detection of metabolites and drugs. This study was initiated by the observation that the signal of an herbicide, i.e., atrazine, was suppressed in MSI investigations of earthworm tissue sections. Herbicide accumulation in earthworms was investigated by time-of-flight secondary ion mass spectrometry and matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI-MSI)...
March 1, 2024: Biointerphases
https://read.qxmd.com/read/38601750/purification-and-characterization-of-a-new-pro-coagulant-protein-from-iranian-echis-carinatus-venom
#47
JOURNAL ARTICLE
Sayeneh Khodadadi, Hadi Rabiei, Soroush Sardari, Hosein Mahboudi, Mohammad Ali Bayatzadeh, Nader Vazifeh Shiran, Maryam Sardabi, Mohammad Reza Akbari Eidgahi, Hamid Madanchi, Nasser Mohammadpour
This work aimed to purify the proteins that cause blood coagulation in the venom of the Iranian Echis carinatus snake species in a comprehensive manner. Gel filtration chromatography (GFC), Ion exchange chromatography (IEC), and Size Exclusion High-Performance Liquid Chromatography (SEC-HPLC) were utilized in the purification of the coagulation factors. The prothrombin clotting time (PRCT) and SDS-PAGE electrophoresis were performed to confirm the coagulative fractions. The fraction with the shortest coagulation time was selected...
July 2024: Biochemistry and Biophysics Reports
https://read.qxmd.com/read/38600731/imaging-and-quantification-of-neuropeptides-in-mouse-pituitary-tissue-by-atmospheric-pressure-matrix-assisted-laser-desorption-ionization-mass-spectrometry
#48
JOURNAL ARTICLE
Qi Yang, Chengyuan Liu, Keke Qi, Ying Xiong, Yang Pan, Changlin Tian
RATIONALE: Atmospheric pressure matrix-assisted laser desorption/ionization (AP-MALDI) mass spectrometry has enabled the untargeted analysis and imaging of neuropeptides and proteins in biological tissues under ambient conditions. Sensitivity in AP-MALDI can be improved by using sample-specific preparation methods. METHODS: A comprehensive and detailed optimization strategy including instrument parameters, matrix spraying and sample tissue washing pretreatment was implemented to enhance the sensitivity and coverage of neuropeptides in mouse pituitary tissues by commercial AP-MALDI mass spectrometry imaging (MSI)...
June 30, 2024: Rapid Communications in Mass Spectrometry: RCM
https://read.qxmd.com/read/38597602/redefining-piscine-lactococcosis
#49
JOURNAL ARTICLE
Taylor I Heckman, Zeinab Yazdi, Caitlin E Older, Matt J Griffin, Geoffrey C Waldbieser, Alexander M Chow, Isabella Medina Silva, Kelsey M Anenson, Julio C García, Benjamin R LaFrentz, Durda Slavic, Kathy L Toohey-Kurth, Paula Yant, Heather M Fritz, Eileen E Henderson, Rebeccah McDowall, Hugh Cai, Mark Adkison, Esteban Soto
UNLABELLED: Piscine lactococcosis is a significant threat to cultured and wild fish populations worldwide. The disease typically presents as a per-acute to acute hemorrhagic septicemia causing high morbidity and mortality, recalcitrant to antimicrobial treatment or management interventions. Historically, the disease was attributed to the gram-positive pathogen Lactococcus garvieae . However, recent work has revealed three distinct lactococcosis-causing bacteria (LCB)- L. garvieae, L. petauri, and L...
April 10, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38590689/analysis-and-identification-of-putative-novel-peptides-purified-from-iranian-endemic-echis-carinatus-sochureki-snake-venom-by-maldi-tof-mass-spectrometry
#50
JOURNAL ARTICLE
Nasri Nasrabadi Nafiseh, Vatanpour Hossein, Mohammadpour Dounighi Nasser, Najafi Mojtaba, Ahmadinejad Minoo, Bayatzadeh Mohammad Ali, Pouyanmehr Giti
The Iranian Echis Carinatus (IEC) venom is an exclusive natural source of bio-substances for a wide range of purposes in the blood coagulation cascade. The present study for the first time was aimed to assess novel pro-coagulant, anti-coagulant and anti-platelet proteins, named EC1.5 (a) , EC5.1 (b) and EC4 (a) from Iranian Echis Carinatus (IEC) venom. These peptides were purified by multi-step chromatography methods. Hematological properties were measured using activated clotting tests, platelet aggregation studies, and hemorrhage assessment...
October 2023: Archives of Razi Institute
https://read.qxmd.com/read/38590126/spatiotemporal-study-of-galactolipid-biosynthesis-in-duckweedwith-mass-spectrometry-imaging-and-in-vivo-isotope-labeling
#51
JOURNAL ARTICLE
Vy T Tat, Young Jin Lee
Isotope labeling coupled with mass spectrometry imaging (MSI) presents a potent strategy for elucidating the dynamics of metabolism in cellular resolution, yet its application to plant systems is scarce. It has the potential to reveal the spatiotemporal dynamics in lipid biosynthesis during plant development. In this study, we explore its application to galactolipid biosynthesis of an aquatic plant, Lemna minor, with D2O labeling. Specifically, matrix-assisted laser desorption/ionization (MALDI) MSI data of two major galactolipids in L...
April 9, 2024: Plant & Cell Physiology
https://read.qxmd.com/read/38586725/christie-atkins-munch-peterson-camp-negative-listeria-monocytogenes-meningitis-in-neonates-report-of-two-cases
#52
Rahul Ranjan, Ankita Rai, Pooja Pandey, Raunak Bir, Priti Agarwal
Listeria monocytogenes , a gram-positive bacillus and an intracellular pathogen, is an uncommon cause of illness in the general population. During pregnancy, a perinatal infection can lead to serious complications such as abortion, stillbirth, neonatal sepsis, and meningitis. We present two cases of neonatal meningitis caused by Christie, Atkins, Munch-Peterson (CAMP)-negative Listeria monocytogenes . In the first case, a seven-day-old female term neonate delivered vaginally, presented with high-grade fever and refusal to feed...
March 2024: Curēus
https://read.qxmd.com/read/38583329/pulsed-laser-ablation-synthesis-of-fresh-te-nanoparticles-for-matrix-assisted-laser-desorption-ionization-mass-spectrometry-maldi-ms-applications
#53
JOURNAL ARTICLE
Karel Novotný, Ivo Krempl, Lukáš Pečinka, Lukáš Moráň, Petr Vaňhara, Josef Havel
This work aims to demonstrate the potential of pulsed laser ablation synthesis (PLA) of tellurium nanoparticles (Te NPs) for use in matrix assisted laser desorption/ionization mass spectrometry (MALDI-MS) applications. An experimental laboratory setup for PLA synthesis of fresh Te NPs was designed to prevent unwanted aggregation of uncoated Te NPs and avoid the need to use additional modifiers. Performing pulsed laser ablation synthesis in liquid (PLAL) using acetone was found to be the optimal way of preparing Te NPs...
April 5, 2024: Talanta
https://read.qxmd.com/read/38577169/development-of-a-mass-spectrometry-imaging-method-to-evaluate-the-penetration-of-moisturizing-components-coated-on-surgical-gloves-into-artificial-membranes
#54
JOURNAL ARTICLE
Erika Nagano, Kazuki Odake, Toru Akiyoshi, Shuichi Shimma
Skin dryness and irritant contact dermatitis induced by the prolonged use of surgical gloves are issues faced by physicians. To address these concerns, manufacturers have introduced surgical gloves that incorporate a moisturizing component on their inner surface, resulting in documented results showing a reduction in hand dermatitis. However, the spatial distribution of moisturizers applied to surgical gloves within the integument remains unclear. Using matrix-assisted laser desorption/ionization (MALDI)-mass spectrometry imaging (MSI), we investigated the spatial distribution of moisturizers in surgical gloves within artificial membranes...
2024: Mass Spectrometry
https://read.qxmd.com/read/38569366/formation-of-multiple-ion-types-during-maldi-imaging-mass-spectrometry-analysis-of-mitragyna-speciosa-alkaloids-in-dosed-rat-brain-tissue
#55
JOURNAL ARTICLE
Zhongling Liang, Yingchan Guo, Nicholas Ellin, Tamara I King, Erin C Berthold, Sushobhan Mukhopadhyay, Abhisheak Sharma, Christopher R McCurdy, Boone M Prentice
Mitragyna speciosa, more commonly known as kratom, has emerged as an alternative to treat chronic pain and addiction. However, the alkaloid components of kratom, which are the major contributors to kratom's pharmaceutical properties, have not yet been fully investigated. In this study, matrix-assisted laser desorption/ionization (MALDI) imaging mass spectrometry was used to map the biodistribution of three alkaloids (corynantheidine, mitragynine, and speciogynine) in rat brain tissues. The alkaloids produced three main ion types during MALDI analysis: [M + H]+ , [M - H]+ , and [M - 3H]+ ...
March 21, 2024: Talanta
https://read.qxmd.com/read/38568716/impact-of-the-rearing-environment-on-the-metabolism-of-shrimps-and-tracing-the-origins-and-species-of-shrimps-using-specific-metabolites
#56
JOURNAL ARTICLE
Tongtala Ao, Aolin Liu, Winnie C Soko, Hongyan Bi
Herein, the link between rearing environmental condition and metabolism was explored. Metabolite fingerprint datasets of black tiger shrimp ( Penaeus monodon ) from three production sites were collected and studied using matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) and HPLC-MS/MS. Two compounds, benzisothiazolinone and hippuric acid, were identified to be potentially related to pollution in the rearing environment and showed different abundances in the analysed shrimp samples with different origins...
April 3, 2024: Analyst
https://read.qxmd.com/read/38566327/genomic-characterization-of-antimicrobial-resistance-in-61-aquatic-bacterial-isolates
#57
JOURNAL ARTICLE
Chrissy D Eckstrand, Brandi K Torrevillas, Rebecca M Wolking, Marla Francis, Laura B Goodman, Olgica Ceric, Trevor L Alexander, Kevin R Snekvik, Claire R Burbick
Antimicrobial resistance (AMR) in pathogens important to aquatic animal health is of increasing concern but vastly understudied. Antimicrobial therapy is used to both treat and prevent bacterial disease in fish and is critical for a viable aquaculture industry and for maintenance of wild fish populations. Unfortunately, phenotypic antimicrobial susceptibility testing is technically difficult for bacteria recovered from aquatic animal hosts resulting in challenges in resistance monitoring using traditional methods...
April 2, 2024: Journal of Veterinary Diagnostic Investigation
https://read.qxmd.com/read/38565795/deciphering-feedback-regulation-of-prostaglandin-f2%C3%AE-in-blood-stasis-syndrome-using-nitrogen-doped-porous-transition-metal-carbides
#58
JOURNAL ARTICLE
Wei Zhuang, Ying Zou, Jinyi Huang, Jiaqing Shao, Shan Zhao, Sai Ma, Tingsong Liu, Lei Wang
Blood stasis syndrome (BSS) has persistent health risks; however, its pathogenesis remains elusive. This obscurity may result in missed opportunities for early intervention, increased susceptibility to chronic diseases, and reduced accuracy and efficacy of treatments. Metabolomics, employing the matrix-assisted laser desorption/ionization (MALDI) strategy, presents distinct advantages in biomarker discovery and unraveling molecular mechanisms. Nonetheless, the challenge is to develop efficient matrices for high-sensitivity and high-throughput analysis of diverse potential biomarkers in complex biosamples...
April 3, 2024: Mikrochimica Acta
https://read.qxmd.com/read/38551391/molecularly-imprinted-heterostructure-assisted-laser-desorption-ionization-mass-spectrometry-analysis-and-imaging-of-quinolones
#59
JOURNAL ARTICLE
Ruya Wang, Weidong Zhang, Weiqiang Liang, Xiao Wang, Lili Li, Zhenhua Wang, Miaomiao Li, Jun Li, Chunxia Ma
Quinolone residues resulting from body metabolism and waste discharge pose a significant threat to the ecological environment and to human health. Therefore, it is essential to monitor quinolone residues in the environment. Herein, an efficient and sensitive matrix-assisted laser desorption/ionization mass spectrometry (MALDI/MS) method was devised by using a novel molecularly imprinted heterojunction (MIP-TNs@GCNs) as the matrix. Molecularly imprinted titanium dioxide nanosheets (MIP-TNs) and graphene-like carbon nitrides (GCNs) were associated at the heterojunction interface, allowing for the specific, rapid, and high-throughput ionization of quinolones...
March 29, 2024: ACS Applied Materials & Interfaces
https://read.qxmd.com/read/38546016/prevalence-and-antimicrobial-resistance-profiles-of-mastitis-causing-bacteria-isolated-from-dairy-goats-in-mukurweini-sub-county-nyeri-county-kenya
#60
JOURNAL ARTICLE
Sarah Kabui, Josephine Kimani, Caroline Ngugi, John Kagira
BACKGROUND: Ruminant mastitis continues to be a cause of economic losses in the dairy industry and remains a major public health hazard globally. OBJECTIVES: This cross-sectional study was carried out in Mukurweini Sub-County of Nyeri County, Kenya, to investigate the prevalence of bacteria causing mastitis, risk factors associated with goat mastitis and the antibiotic resistance profiles of bacteria isolated from the goat milk. METHODS: Farm level data on risk factors for mastitis was obtained from 56 farmers using a semi structured questionnaire...
May 2024: Veterinary Medicine and Science
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