keyword
https://read.qxmd.com/read/38712279/extracellular-vesicles-promote-proliferation-in-an-animal-model-of-regeneration
#21
Priscilla N Avalos, Lily L Wong, David J Forsthoefel
Extracellular vesicles (EVs) are secreted nanoparticles composed of a lipid bilayer that carry lipid, protein, and nucleic acid cargo between cells as a mode of intercellular communication. Although EVs can promote tissue repair in mammals, their roles in animals with greater regenerative capacity are not well understood. Planarian flatworms are capable of whole body regeneration due to pluripotent somatic stem cells called neoblasts that proliferate in response to injury. Here, using transmission electron microscopy, nanoparticle tracking analysis, and protein content examination, we showed that EVs enriched from the tissues of the planarian Schmidtea mediterranea had similar morphology and size as other eukaryotic EVs, and that these EVs carried orthologs of the conserved EV biogenesis regulators ALIX and TSG101...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38712156/molecular-differences-between-neonatal-and-adult-stria-vascularis-from-organotypic-explants-and-transcriptomics
#22
Matsya Ruppari Thulasiram, Ryosuke Yamamoto, Rafal T Olszewski, Shoujun Gu, Robert J Morell, Michael Hoa, Alain Dabdoub
SUMMARY: The stria vascularis (SV), part of the blood-labyrinth barrier, is an essential component of the inner ear that regulates the ionic environment required for hearing. SV degeneration disrupts cochlear homeostasis, leading to irreversible hearing loss, yet a comprehensive understanding of the SV, and consequently therapeutic availability for SV degeneration, is lacking. We developed a whole-tissue explant model from neonatal and adult mice to create a robust platform for SV research...
April 25, 2024: bioRxiv
https://read.qxmd.com/read/38711085/engineering-pd-1-targeted-small-protein-variants-for-in-vitro-diagnostics-and-in-vivo-pet-imaging
#23
JOURNAL ARTICLE
Joanna Maria Mierzwicka, Hana Petroková, Leona Rašková Kafková, Petr Kosztyu, Jiří Černý, Milan Kuchař, Miloš Petřík, Kateřina Bendová, Kristýna Krasulová, Yaroslava Groza, Lucie Vaňková, Shiv Bharadwaj, Natalya Panova, Michal Křupka, Jozef Škarda, Milan Raška, Petr Malý
BACKGROUND: Programmed cell death 1 (PD-1) belongs to immune checkpoint proteins ensuring negative regulation of the immune response. In non-small cell lung cancer (NSCLC), the sensitivity to treatment with anti-PD-1 therapeutics, and its efficacy, mostly correlated with the increase of tumor infiltrating PD-1+ lymphocytes. Due to solid tumor heterogeneity of PD-1+ populations, novel low molecular weight anti-PD-1 high-affinity diagnostic probes can increase the reliability of expression profiling of PD-1+ tumor infiltrating lymphocytes (TILs) in tumor tissue biopsies and in vivo mapping efficiency using immune-PET imaging...
May 6, 2024: Journal of Translational Medicine
https://read.qxmd.com/read/38707387/subtractive-genomics-study-for-the-identification-of-therapeutic-targets-against-cronobacter-sakazakii-a-threat-to-infants
#24
JOURNAL ARTICLE
Ishtiaque Ahammad, Anika Bushra Lamisa, Sadia Sharmin, Arittra Bhattacharjee, Zeshan Mahmud Chowdhury, Tanvir Ahamed, Mohammad Uzzal Hossain, Keshob Chandra Das, Md Salimullah, Chaman Ara Keya
Cronobacter sakazakii is an opportunistic pathogen that has been associated with severe infection in neonates such as necrotizing enterocolitis (NEC), neonatal meningitis, and bacteremia. This pathogen can survive in a relatively dry environment, especially in powdered infant formula (PIF). Unfortunately, conventional drugs that were once effective against C. sakazakii are gradually losing their efficacy due to rising antibiotic resistance. In this study, a subtractive genomic approach was followed in order to identify potential therapeutic targets in the pathogen...
May 15, 2024: Heliyon
https://read.qxmd.com/read/38704136/crispr-cas9-screen-reveals-that-targeting-trim34-enhances-ferroptosis-sensitivity-and-augments-immunotherapy-efficacy-in-hepatocellular-carcinoma
#25
JOURNAL ARTICLE
Feifan Yao, Suiqing Zhou, Ruizhi Zhang, Yining Chen, Wei Huang, Kai Yu, Nanmu Yang, Xiangjun Qian, Xiaofeng Tie, Jiali Xu, Yu Zhang, Tasiken Baheti, Jing Xu, Xinzheng Dai, Xiaopei Hao, Liren Zhang, Xuehao Wang, Qing Li
Hepatocellular carcinoma (HCC) is a prevalent malignancy characterized by complex heterogeneity and drug resistance. Resistance to ferroptosis is closely related to the progression of HCC. While HCC tumors vary in their sensitivity to ferroptosis, the precise factors underlying this heterogeneity remain unclear. In this study, we sought to elucidate the mechanisms that contribute to ferroptosis resistance in HCC. Whole-genome CRISPR/Cas9 screen using a subtoxic concentration (IC20) of ferroptosis inducer erastin in the HCC cell line Huh7 revealed TRIM34 as a critical driver of ferroptosis resistance in HCC...
May 2, 2024: Cancer Letters
https://read.qxmd.com/read/38703673/preclinical-in-vitro-and-in-vivo-activity-of-the-raf-mek-clamp-avutometinib-in-combination-with-fak-inhibition-in-uterine-carcinosarcomas
#26
JOURNAL ARTICLE
Cem Demirkiran, Michelle Greenman, Stefania Bellone, Blair McNamara, Tobias Max Philipp Hartwich, Diego Manavella, Levent Mutlu, Margherita Zipponi, Yang Yang-Hartwich, Kevin Yang, Elena Ratner, Peter E Schwartz, Silvia Coma, Jonathan Pachter, Alessandro D Santin
OBJECTIVES: Uterine carcinosarcomas (UCS) are rare, biologically aggressive tumors. Since UCS may harbor mutations in RAS/MAPK pathway genes we evaluated the preclinical in vitro and in vivo efficacy of the RAF/MEK clamp avutometinib in combination with the focal adhesion kinase (FAK) inhibitors defactinib or VS-4718 against multiple primary UCS cell lines and xenografts. METHODS: Whole-exome-sequencing (WES) was used to evaluate the genetic landscape of 5 primary UCS cell lines...
May 3, 2024: Gynecologic Oncology
https://read.qxmd.com/read/38701572/beneath-the-surface-a-systematic-review-on-intraoperative-imaging-techniques-for-deep-margin-assessment-in-oral-squamous-cell-carcinoma
#27
REVIEW
C M E M Adriaansens, K J de Koning, R J J van Es, R de Bree, Rob Noorlag
Resection margins of oral squamous cell carcinoma (SCC) are often inadequate. A systematic review on clinical intraoperative whole-specimen imaging techniques to obtain adequate deep resection margins in oral SCC is lacking. Such a review may render better alternatives for the current insufficient intraoperative techniques: palpation and frozen section analyses (FSA). This review resulted in ten publications investigating ultrasound (US), four investigating fluorescence, and three investigating MRI. Both US and fluorescence were able to image the tumor intraorally and perform ex-vivo imaging of the resection specimen...
May 2, 2024: Oral Oncology
https://read.qxmd.com/read/38701112/development-of-an-automated-morphometric-approach-to-assess-vascular-outcomes-following-exposure-to-environmental-chemicals-in-zebrafish
#28
JOURNAL ARTICLE
Xiali Zhong, Junzhou Chen, Zhuyi Zhang, Qicheng Zhu, Di Ji, Weijian Ke, Congying Niu, Can Wang, Nan Zhao, Wenquan Chen, Kunkun Jia, Qian Liu, Maoyong Song, Chunqiao Liu, Yanhong Wei
BACKGROUND: Disruptions in vascular formation attributable to chemical insults is a pivotal risk factor or potential etiology of developmental defects and various disease settings. Among the thousands of chemicals threatening human health, the highly concerning groups prevalent in the environment and detected in biological monitoring in the general population ought to be prioritized because of their high exposure risks. However, the impacts of a large number of environmental chemicals on vasculature are far from understood...
May 2024: Environmental Health Perspectives
https://read.qxmd.com/read/38699440/loss-of-function-ogfrl1-variants-identified-in-autosomal-recessive-cherubism-families
#29
JOURNAL ARTICLE
Mizuho Kittaka, Noriyoshi Mizuno, Hiroyuki Morino, Tetsuya Yoshimoto, Tianli Zhu, Sheng Liu, Ziyi Wang, Kotoe Mayahara, Kyohei Iio, Kaori Kondo, Toshio Kondo, Tatsuhide Hayashi, Sarah Coghlan, Yayoi Teno, Andrew Anh Phung Doan, Marcus Levitan, Roy B Choi, Shinji Matsuda, Kazuhisa Ouhara, Jun Wan, Annelise M Cassidy, Stephane Pelletier, Sheela Nampoothiri, Andoni J Urtizberea, Alexander G Robling, Mitsuaki Ono, Hideshi Kawakami, Ernst J Reichenberger, Yasuyoshi Ueki
Cherubism (OMIM 118400) is a rare craniofacial disorder in children characterized by destructive jawbone expansion due to the growth of inflammatory fibrous lesions. Our previous studies have shown that gain-of-function mutations in SH3 domain-binding protein 2 (SH3BP2) are responsible for cherubism and that a knock-in mouse model for cherubism recapitulates the features of cherubism, such as increased osteoclast formation and jawbone destruction. To date, SH3BP2 is the only gene identified to be responsible for cherubism...
June 2024: JBMR Plus
https://read.qxmd.com/read/38698992/octopaminergic-descending-neurons-in-drosophila-connectivity-tonic-activity-and-relation-to-locomotion
#30
JOURNAL ARTICLE
Helene Babski, Marcello Codianni, Vikas Bhandawat
Projection neurons that communicate between different brain regions and local neurons that shape computation within a brain region form the majority of all neurons in the brain. Another important class of neurons is neuromodulatory neurons; these neurons are in much smaller numbers than projection/local neurons but have a large influence on computations in the brain. Neuromodulatory neurons are classified by the neurotransmitters they carry, such as dopamine and serotonin. Much of our knowledge of the effect of neuromodulators comes from experiments in which either a large population of neuromodulatory neurons or the entire population is perturbed...
May 15, 2024: Heliyon
https://read.qxmd.com/read/38695243/predictive-dna-damage-signaling-for-low%C3%A2-dose-ionizing-radiation
#31
JOURNAL ARTICLE
Jeong-In Park, Seung-Youn Jung, Kyung-Hee Song, Dong-Hyeon Lee, Jiyeon Ahn, Sang-Gu Hwang, In-Su Jung, Dae-Seog Lim, Jie-Young Song
Numerous studies have attempted to develop biological markers for the response to radiation for broad and straightforward application in the field of radiation. Based on a public database, the present study selected several molecules involved in the DNA damage repair response, cell cycle regulation and cytokine signaling as promising candidates for low‑dose radiation‑sensitive markers. The HuT 78 and IM‑9 cell lines were irradiated in a concentration‑dependent manner, and the expression of these molecules was analyzed using western blot analysis...
June 2024: International Journal of Molecular Medicine
https://read.qxmd.com/read/38694428/chromatin-accessibility-and-epigenetic-deoxyribose-nucleic-acid-dna-modifications-in-chronic-kidney-disease-ckd-osteoblasts-a-study-of-bone-and-osteoblasts-from-pediatric-patients-with-ckd
#32
JOURNAL ARTICLE
Aline Martin, Riki Kawaguchi, Qing Wang, Isidro B Salusky, Renata C Pereira, Katherine Wesseling-Perry
Maturation defects are intrinsic features of osteoblast lineage cells in CKD patients. These defects persist ex vivo, suggesting that CKD induces epigenetic changes in bone cells. To gain insights into which signaling pathways contribute to CKD-mediated, epigenetically driven, impairments in osteoblast maturation, we characterized RNA expression and DNA methylation patterns by RNA-Seq and MethylationEpic in primary osteoblasts from nine adolescent and young adult dialysis patients with end-stage kidney disease and three healthy references...
January 2024: JBMR Plus
https://read.qxmd.com/read/38693059/survival-of-transfused-red-blood-cells-from-a-donor-with-alpha-thalassemia-trait-in-a-recipient-with-sickle-cell-disease
#33
JOURNAL ARTICLE
Marianne E M Yee, Mischa L Covington, Patricia E Zerra, James W McCoy, Kirk A Easley, Clinton H Joiner, Janetta Bryksin, Richard O Francis, Christopher M Lough, Niren Patel, Abdullah Kutlar, Cassandra D Josephson, John D Roback, Sean R Stowell, Ross M Fasano
BACKGROUND: Post-transfusion survival of donor red blood cells (RBCs) is important for effective chronic transfusion therapy in conditions including sickle cell disease (SCD). Biotin labeling RBCs allows direct in vivo measurement of multiple donor RBC units simultaneously post-transfusion. STUDY DESIGN AND METHODS: In an observational trial of patients with SCD receiving monthly chronic transfusion therapy, aliquots of RBCs from one transfusion episode were biotin-labeled and infused along with the unlabeled RBC units...
May 1, 2024: Transfusion
https://read.qxmd.com/read/38691139/pharmacokinetics-of-nirmatrelvir-ritonavir-and-the-drug-drug-interaction-with-calcineurin-inhibitor-in-renal-transplant-recipients
#34
JOURNAL ARTICLE
Xueyin Xu, Huanxi Zhang, Longshan Liu, Qian Fu, Chenglin Wu, Xiaobin Lin, Kejing Tang, Changxi Wang, Pan Chen
OBJECTIVES: To describe the pharmacokinetic (PK) characteristics of nirmatrelvir/ritonavir in renal transplant recipients and explore the potential factors that related to the PK variance of nirmatrelvir/ritonavir and its interaction with calcineurin inhibitor (CNI). METHODS: Renal transplant recipients treated with CNI and nirmatrelvir/ritonavir were prospectively enrolled. Steady-state plasma concentrations of nirmatrelvir/ritonavir were determined by high-performance liquid chromatography-tandem mass spectrometry, and the PK parameters were calculated using non-compartmental analysis...
May 1, 2024: European Journal of Clinical Pharmacology
https://read.qxmd.com/read/38688644/acute-myelomonoblastic-leukemia-my1-de-a-preclinical-rat-model
#35
JOURNAL ARTICLE
Viktória Arató, Zita Képes, Judit P Szabó, Gergely Farkasinszky, Tamás Sass, Noémi Dénes, Adrienn Kis, Gábor Opposits, István Jószai, Ferenc Krisztián Kálmán, István Hajdu, György Trencsényi, István Kertész
BACKGROUND/AIM: Since acute myeloid leukemias still represent the most aggressive type of adult acute leukemias, the profound understanding of disease pathology is of paramount importance for diagnostic and therapeutic purposes. Hence, this study aimed to explore the real-time disease fate with the establishment of an experimental myelomonoblastic leukemia (My1/De) rat model using preclinical positron emission tomography (PET) and whole-body autoradiography. MATERIALS AND METHODS: In vitro [18 F]F-FDG uptake studies were performed to compare the tracer accumulation in the newly cultured My1/De tumor cell line (blasts) with that in healthy control and My1/De bone marrow suspensions...
2024: In Vivo
https://read.qxmd.com/read/38688436/the-5-ht-7-receptor-antagonist-sb-269970-ameliorates-maternal-fluoxetine-exposure-induced-impairment-of-synaptic-plasticity-in-the-prefrontal-cortex-of-the-offspring-female-mice
#36
JOURNAL ARTICLE
Bartosz Bobula, Magdalena Kusek, Grzegorz Hess
The use of a selective serotonin reuptake inhibitor fluoxetine in depression during pregnancy and the postpartum period might increase the risk of affective disorders and cognitive symptoms in progeny. In animal models, maternal exposure to fluoxetine throughout gestation and lactation negatively affects the behavior of the offspring. Little is known about the effects of maternal fluoxetine on synaptic transmission and plasticity in the offspring cerebral cortex. During pregnancy and lactation C57BL/6J mouse dams received fluoxetine (7...
April 28, 2024: Pharmacology, Biochemistry, and Behavior
https://read.qxmd.com/read/38687909/nanoactuator-for-neuronal-optoporation
#37
JOURNAL ARTICLE
Marlene E Pfeffer, Mattia Lorenzo DiFrancesco, Arin Marchesi, Filippo Galluzzi, Matteo Moschetta, Andrea Rossini, Simona Francia, Clemens Franz, Yulia Fok, Claire Valotteau, Giuseppe Maria Paternò, Lorena Redondo Morata, Francesca Vacca, Sara Mattiello, Arianna Magni, Luca Maragliano, Luca Beverina, Giuseppe Mattioli, Guglielmo Lanzani, Pietro Baldelli, Elisabetta Colombo, Fabio Benfenati
Light-driven modulation of neuronal activity at high spatial-temporal resolution is becoming of high interest in neuroscience. In addition to optogenetics, nongenetic membrane-targeted nanomachines that alter the electrical state of the neuronal membranes are in demand. Here, we engineered and characterized a photoswitchable conjugated compound (BV-1) that spontaneously partitions into the neuronal membrane and undergoes a charge transfer upon light stimulation. The activity of primary neurons is not affected in the dark, whereas millisecond light pulses of cyan light induce a progressive decrease in membrane resistance and an increase in inward current matched to a progressive depolarization and action potential firing...
April 30, 2024: ACS Nano
https://read.qxmd.com/read/38687615/innate-immune-activation-restricts-priming-and-protective-efficacy-of-the-radiation-attenuated-pfspz-malaria-vaccine
#38
JOURNAL ARTICLE
Leetah Senkpeil, Jyoti Bhardwaj, Morgan R Little, Prasida Holla, Aditi Upadhye, Elizabeth M Fusco, Phillip A Swanson Ii, Ryan E Wiegand, Michael D Macklin, Kevin Bi, Barbara J Flynn, Ayako Yamamoto, Erik L Gaskin, D Noah Sather, Adrian L Oblak, Edward Simpson, Hongyu Gao, W Nicholas Haining, Kathleen B Yates, Xiaowen Liu, Tooba Murshedkar, Thomas L Richie, B Kim Lee Sim, Kephas Otieno, Simon Kariuki, Xiaoling Xuei, Yunlong Liu, Rafael B Polidoro, Stephen L Hoffman, Martina Oneko, Laura C Steinhardt, Nathan W Schmidt, Robert A Seder, Tuan M Tran
A systems analysis was conducted to determine the potential molecular mechanisms underlying differential immunogenicity and protective efficacy results of a clinical trial of the radiation-attenuated whole sporozoite PfSPZ Vaccine in African infants. Innate immune activation and myeloid signatures at pre-vaccination baseline correlated with protection from Pf parasitemia in placebo controls. These same signatures were associated with susceptibility to parasitemia among infants who received the highest and most protective PfSPZ Vaccine dose...
April 30, 2024: JCI Insight
https://read.qxmd.com/read/38687563/kupffer-cell-diversity-maintains-liver-function-in-alcohol-associated-liver-disease
#39
JOURNAL ARTICLE
Kyo Sasaki, Sheetalnath Rooge, Sumedha Gunewardena, Janice Averilla Hintz, Priyanka Ghosh, Isabel Aranzazu Pulido Ruiz, Kyle Yuquimpo, Michael Schonfeld, Heer Meta, Heather L Stevenson, Omar A Saldarriaga, Esteban Arroyave, Irina Tikhanovich, Ann L Wozniak, Steven A Weinman
BACKGROUND AIMS: Liver macrophages are heterogeneous and play an important role in alcohol-associated liver disease (ALD) but there is limited understanding of the functions of specific macrophage subsets in the disease. We used a Western Diet Alcohol (WDA) mouse model of ALD to examine the hepatic myeloid cell compartment by scRNA seq and targeted Kupffer cell (KC) ablation to understand the diversity and function of liver macrophages in ALD. APPROACH AND RESULTS: In the WDA liver, KCs and infiltrating monocytes/macrophages (IMs) each represented about 50% of the myeloid pool...
April 30, 2024: Hepatology: Official Journal of the American Association for the Study of Liver Diseases
https://read.qxmd.com/read/38686005/physicochemical-properties-based-hybrid-machine-learning-technique-for-the-prediction-of-sars-cov-2-t-cell-epitopes-as-vaccine-targets
#40
JOURNAL ARTICLE
Syed Nisar Hussain Bukhari, E Elshiekh, Mohamed Abbas
Majority of the existing SARS-CoV-2 vaccines work by presenting the whole pathogen in the attenuated form to immune system to invoke an immune response. On the other hand, the concept of a peptide based vaccine (PBV) is based on the identification and chemical synthesis of only immunodominant peptides known as T-cell epitopes (TCEs) to induce a specific immune response against a particular pathogen. However PBVs have received less attention despite holding huge untapped potential for boosting vaccine safety and immunogenicity...
2024: PeerJ. Computer Science
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