keyword
https://read.qxmd.com/read/38754142/macrocyclization-strategy-for-improving-candidate-profiles-in-medicinal-chemistry
#1
REVIEW
Om Darlami, Rabin Pun, Sung-Hoon Ahn, Seok-Ho Kim, Dongyun Shin
Macrocycles are defined as cyclic compounds with 12 or more members. In medicinal chemistry, they are categorized based on their core chemistry into cyclic peptides and macrocycles. Macrocycles are advantageous because of their structural diversity and ability to achieve high affinity and selectivity towards challenging targets that are often not addressable by conventional small molecules. The potential of macrocyclization to optimize drug-like properties while maintaining adequate bioavailability and permeability has been emphasized as a key innovation in medicinal chemistry...
May 14, 2024: European Journal of Medicinal Chemistry
https://read.qxmd.com/read/38754082/early-laao-device-migration-after-combined-atrial-fibrillation-ablation-and-left-atrial-appendage-occlusion
#2
JOURNAL ARTICLE
Wong Ling Na, Mark Tam Tsz Kim, Leo Kar Lok Lai, Kevin Ka-Ho Kam, Alex Pui-Wai Lee, Chin-Pang Chan, Joseph Yat-Sun Chan, Chak-Yu So
The combined procedure of catheter ablation and percutaneous left atrial appendage occlusion for patients with atrial fibrillation has been shown to be safe and feasible using radiofrequency energy or cryoballoon.
May 14, 2024: Journal of Invasive Cardiology
https://read.qxmd.com/read/38754074/nanoscale-phase-and-orientation-mapping-in-multiphase-polycrystalline-hafnium-zirconium-oxide-thin-films-using-4d-stem-and-automated-diffraction-indexing
#3
JOURNAL ARTICLE
Garrett Baucom, Eitan Hershkovitz, Paul Chojecki, Toshikazu Nishida, Roozbeh Tabrizian, Honggyu Kim
Ferroelectric hafnium zirconium oxide (HZO) holds promise for nextgeneration memory and transistors due to its superior scalability and seamless integration with complementary metal-oxide-semiconductor processing. A major challenge in developing this emerging ferroelectric material is the metastable nature of the non-centrosymmetric polar phase responsible for ferroelectricity, resulting in a coexistence of both polar and non-polar phases with uneven grain sizes and random orientations. Due to the structural similarity between the multiple phases and the nanoscale dimensions of the thin film devices, accurate measurement of phase-specific information remains challenging...
May 16, 2024: Small Methods
https://read.qxmd.com/read/38754029/synthesis-of-carboxymethyl-chitosan-guar-gum-poly-vinylpyrrolidone-ternary-blended-hydrogels-with-antibacterial-anticancer-efficacy-and-drug-delivery-applications
#4
JOURNAL ARTICLE
Muhammad Asim Raza, Shin-Ae Kim, Dong Im Kim, Mi-Kyung Song, Sung Soo Han, Sang Hyun Park
Biopolymers have the utmost significance in biomedical applications and blending synthetic polymers has shown favorable characteristics versus individual counterparts. The utilization of the blends can be restricted through the use of toxic chemical agents such as initiators or crosslinkers. In this regard, a chemical agent-free ionizing irradiation is a beneficial alternative for preparing the hydrogels for biomedical applications. In this study, carboxymethyl chitosan (CM-CS), guar gum (GG), and poly(vinylpyrrolidone) (PVP) based ternary blends (TB) were crosslinked using various doses of ionizing irradiation to fabricate hydrogels...
May 16, 2024: Journal of Biomaterials Science. Polymer Edition
https://read.qxmd.com/read/38754024/relationship-between-urinary-sodium-excretion-and-bone-mineral-density-in-pediatrics-population-based-study-from-knhanes-v-2010-2011
#5
JOURNAL ARTICLE
In Kyung Lee, Yoo Mi Kim, Han Hyuk Lim
OBJECTIVES: Osteoporosis poses a growing public health challenge worldwide. While calcium and vitamin D may influence bone mineral density (BMD), the effect of sodium (Na) intake, particularly in pediatrics, remains unexplored. This study aimed to evaluate the relationship between urinary Na excretion and BMD in a Korean pediatric population. METHODS: A total of 2,018 participants (1,084 males and 934 females) aged 10-18 years were included from the data obtained from Korea National Health and Nutrition Examination Survey V (2010-2011)...
May 17, 2024: Journal of Pediatric Endocrinology & Metabolism: JPEM
https://read.qxmd.com/read/38754022/silicon-nitride-surface-enabled-propane-dehydrogenation-catalyzed-by-supported-organozirconium
#6
JOURNAL ARTICLE
Joshua C DeMuth, Yu Lim Kim, Jacklyn N Hall, Zoha H Syed, Kaixi Deng, Frédéric A Perras, Magali S Ferrandon, A Jeremy Kropf, Cong Liu, David M Kaphan, Massimiliano Delferro
Mesoporous silicon nitride (Si3 N4 ) is a nontraditional support for the chemisorption of organometallic complexes with the potential for enhancing catalytic activity through features such as the increased Lewis basicity of nitrogen for heterolytic bond activation, increased ligand donor strength, and metal-ligand orbital overlap. Here, tetrabenzyl zirconium (ZrBn4 ) was chemisorbed on Si3 N4 , and the resulting supported organometallic species was characterized by Diffuse Reflectance Infrared Fourier Transform Spectroscopy (DRIFTS), Dynamic Nuclear Polarization-enhanced Solid State Nuclear Magnetic Resonance (DNP-SSNMR), and X-ray Absorption Spectroscopy (XAS)...
May 16, 2024: Journal of the American Chemical Society
https://read.qxmd.com/read/38753970/insights-into-tissue-accumulation-depletion-and-health-risk-assessment-of-clopidol-in-poultry
#7
JOURNAL ARTICLE
Wenting Wang, Min-Chul Shin, Sang-Hee Jeong, Jeong-Ran Min, Jong-Su Seo, Jong-Hwan Kim
Clopidol is extensively used in livestock farming and residues of this antibiotic can persist in animal tissues, posing a risk to humans and the environment. In this study, we investigated the depletion of clopidol in various edible tissues of chickens (muscle, liver, kidney, fat, and eggs) using liquid chromatography-tandem mass spectrometry after the administration of a clopidol-contaminated diet (at 250 mg kg-1 for the high (1x) dose). After 14 d of exposure, the clopidol concentrations were highest in eggs (median: 9...
May 16, 2024: Food Additives & Contaminants. Part A, Chemistry, Analysis, Control, Exposure & Risk Assessment
https://read.qxmd.com/read/38753892/comparative-effectiveness-of-denosumab-vs-alendronate-among-postmenopausal-women-with-osteoporosis
#8
JOURNAL ARTICLE
Jeffrey R Curtis, Tarun Arora, Ye Liu, Tzu-Chieh Lin, Leslie Spangler, Vanessa C Brunetti, Robert Kees Stad, Michele McDermott, Brian D Bradbury, Min Kim
Although clinical trials have shown that denosumab significantly increases bone mineral density at key skeletal sites more than oral bisphosphonates, evidence is lacking from head-to-head randomized trials evaluating fracture outcomes. This retrospective cohort study uses administrative claims data from Medicare fee-for service beneficiaries to evaluate the comparative effectiveness of denosumab versus alendronate in reducing fracture risk among women with postmenopausal osteoporosis (PMO) in the US. Women with PMO ≥ 66 years of age with no prior history of osteoporosis treatment, who initiated denosumab (n = 89 115) or alendronate (n = 389 536) from 2012 to 2018, were followed from treatment initiation until the first of a specific fracture outcome, treatment discontinuation or switch, end of study (December 31, 2019), or other censoring criteria...
May 16, 2024: Journal of Bone and Mineral Research
https://read.qxmd.com/read/38753877/interpretable-online-network-dictionary-learning-for-inferring-long-range-chromatin-interactions
#9
JOURNAL ARTICLE
Vishal Rana, Jianhao Peng, Chao Pan, Hanbaek Lyu, Albert Cheng, Minji Kim, Olgica Milenkovic
Dictionary learning (DL), implemented via matrix factorization (MF), is commonly used in computational biology to tackle ubiquitous clustering problems. The method is favored due to its conceptual simplicity and relatively low computational complexity. However, DL algorithms produce results that lack interpretability in terms of real biological data. Additionally, they are not optimized for graph-structured data and hence often fail to handle them in a scalable manner. In order to address these limitations, we propose a novel DL algorithm called online convex network dictionary learning (online cvxNDL)...
May 16, 2024: PLoS Computational Biology
https://read.qxmd.com/read/38753874/liebig-s-law-of-the-minimum-in-the-tgf-%C3%AE-smad-pathway
#10
JOURNAL ARTICLE
Yuchao Li, Difan Deng, Chris Tina Höfer, Jihye Kim, Won Do Heo, Quanbin Xu, Xuedong Liu, Zhike Zi
Cells use signaling pathways to sense and respond to their environments. The transforming growth factor-β (TGF-β) pathway produces context-specific responses. Here, we combined modeling and experimental analysis to study the dependence of the output of the TGF-β pathway on the abundance of signaling molecules in the pathway. We showed that the TGF-β pathway processes the variation of TGF-β receptor abundance using Liebig's law of the minimum, meaning that the output-modifying factor is the signaling protein that is most limited, to determine signaling responses across cell types and in single cells...
May 16, 2024: PLoS Computational Biology
https://read.qxmd.com/read/38753871/mobilizing-grievances-in-the-internet-age-the-case-of-national-online-petitioning-in-south-korea-2017-2022
#11
JOURNAL ARTICLE
Kayoon Kim, Chan S Suh
Which kinds of grievances garner support from the public on online platforms? Focusing on national online petitioning, one of the forms of direct democracy in contemporary politics, we examine the content and characteristics of petitions that succeeded in attracting public attention and support. Using our comprehensive data on online petitions that were submitted to the executive office between 2017 and 2022 in South Korea, our analysis yields three important findings. First, a mix of post-materialist topics such as human rights and gender equality and materialist topics such as safety and environment turn out to be salient among petitions that meet the signature threshold...
2024: PloS One
https://read.qxmd.com/read/38753840/innovative-ai-methods-for-monitoring-front-of-package-information-a-case-study-on-infant-foods
#12
JOURNAL ARTICLE
Dohee Kim, Seo-Young Kim, Ra Yoo, Jaegul Choo, Hee Yang
Front-of-package (FOP) is one of the most direct communication channels connecting manufacturers and consumers, as it displays crucial information such as certification, nutrition, and health. Traditional methods for obtaining information from FOPs often involved manual collection and analysis. To overcome these labor-intensive characteristics, new methods using two artificial intelligence (AI) approaches were applied for information monitoring of FOPs. In order to provide practical implementations, a case study was conducted on infant food products...
2024: PloS One
https://read.qxmd.com/read/38753805/cellular-and-biophysical-applications-of-genetic-code-expansion
#13
REVIEW
Han Bin Yi, Seungeun Lee, Kyungdeok Seo, Hyeongjo Kim, Minah Kim, Hyun Soo Lee
Despite their diverse functions, proteins are inherently constructed from a limited set of building blocks. These compositional constraints pose significant challenges to protein research and its practical applications. Strategically manipulating the cellular protein synthesis system to incorporate novel building blocks has emerged as a critical approach for overcoming these constraints in protein research and application. In the past two decades, the field of genetic code expansion (GCE) has achieved significant advancements, enabling the integration of numerous novel functionalities into proteins across a variety of organisms...
May 16, 2024: Chemical Reviews
https://read.qxmd.com/read/38753765/alphafold2-structures-guide-prospective-ligand-discovery
#14
JOURNAL ARTICLE
Jiankun Lyu, Nicholas Kapolka, Ryan Gumpper, Assaf Alon, Liang Wang, Manish K Jain, Ximena Barros-Álvarez, Kensuke Sakamoto, Yoojoong Kim, Jeffrey DiBerto, Kuglae Kim, Isabella S Glenn, Tia A Tummino, Sijie Huang, John J Irwin, Olga O Tarkhanova, Yurii Moroz, Georgios Skiniotis, Andrew C Kruse, Brian K Shoichet, Bryan L Roth
AlphaFold2 (AF2) models have had wide impact, but they have had mixed success in retrospective ligand recognition. We prospectively docked large libraries against unrefined AF2 models of the σ2 and 5-HT2A receptors, testing hundreds of new molecules and comparing results to docking against the experimental structures. Hit rates were high and similar for the experimental and the AF2 structures, as were affinities. The success of docking against the AF2 models was achieved despite differences in orthosteric residue conformations versus the experimental structures...
May 16, 2024: Science
https://read.qxmd.com/read/38753733/factors-associated-with-health-related-quality-of-life-among-people-living-with-hiv-in-south-korea-tobit-regression-analysis
#15
JOURNAL ARTICLE
Gwang Suk Kim, Layoung Kim, SangA Lee, Mi-So Shim, Youngjin Lee, Seoyoung Baek
This study investigated health-related quality of life and identified factors affecting it among people with the HIV in South Korea. A total of 243 people living with HIV participated in this cross-sectional survey. Data were collected from five hospitals between November 2021 and August 2022 using structured online questionnaires. Data were analyzed using descriptive statistics, Mann-Whitney U test, Kruskal-Wallis test, Spearman's rho analysis, and Tobit regression analysis because a significant ceiling effect was observed for the dependent variable...
2024: PloS One
https://read.qxmd.com/read/38753730/rna-sequencing-provides-novel-insights-into-the-pathogenesis-of-naturally-occurring-myxomatous-mitral-valve-disease-stage-b1-in-beagle-dogs
#16
JOURNAL ARTICLE
Tae-Seok Kim, Chae-Yeon Hong, Seong-Ju Oh, Yong-Ho Choe, Tae-Sung Hwang, Jaemin Kim, Sung-Lim Lee, Hakyoung Yoon, Eun-Yeong Bok, A-Ra Cho, Yoon Jung Do, Eunju Kim
Myxomatous mitral valve disease (MMVD) is the most common cardiovascular disorder in dogs with a high prevalence, accounting for approximately 75% of all canine heart disease cases. MMVD is a complex disease and shows variable progression from mild valve leakage to severe regurgitation, potentially leading to heart failure. However, the molecular mechanisms and age-related changes that govern disease progression, especially at the early stage (B1) before the development of discernable clinical signs, remain poorly understood...
2024: PloS One
https://read.qxmd.com/read/38753674/dynamic-imaging-of-lipid-droplets-in-cells-and-tissues-by-using-dioxaborine-barbiturate-based-fluorogenic-probes
#17
JOURNAL ARTICLE
Eun-Ji Kim, Hye-Bin Jeon, Min-Ji Kang, Jiyoun Lee
Lipids are essential for various cellular functions, including energy storage, membrane flexibility, and signaling molecule production. Maintaining proper lipid levels is important to prevent health problems such as cancer, neurodegenerative disorders, cardiovascular diseases, obesity, and diabetes. Monitoring cellular lipid droplets (LDs) in real-time with high resolution can provide insights into LD-related pathways and diseases owing to the dynamic nature of LDs. Fluorescence-based imaging is widely used for tracking LDs in live cells and animal models...
May 16, 2024: Analytical Chemistry
https://read.qxmd.com/read/38753539/measles-outbreak-associated-with-a-migrant-shelter-chicago-illinois-february-may-2024
#18
JOURNAL ARTICLE
Kimberly Gressick, Amy Nham, Thomas D Filardo, Kendall Anderson, Stephanie R Black, Katherine Boss, Maribel Chavez-Torres, Shelby Daniel-Wayman, Peter Dejonge, Emily Faherty, Michelle Funk, Janna Kerins, Do Young Kim, Alyse Kittner, Colin Korban, Massimo Pacilli, Anne Schultz, Alexander Sloboda, Shane Zelencik, Arti Barnes, Joshua J Geltz, Jodi Morgan, Kyran Quinlan, Heather Reid, Kevin Chatham-Stephens, Tatiana M Lanzieri, Jessica Leung, Chelsea S Lutz, Ponesai Nyika, Kelley Raines, Sumathi Ramachandran, Maria I Rivera, Jordan Singleton, Dennis Wang, Paul A Rota, David Sugerman, Stephanie Gretsch, Brian F Borah
Measles, a highly contagious respiratory virus with the potential to cause severe complications, hospitalization, and death, was declared eliminated from the United States in 2000; however, with ongoing global transmission, infections in the United States still occur. On March 7, 2024, the Chicago Department of Public Health (CDPH) confirmed a case of measles in a male aged 1 year residing in a temporary shelter for migrants in Chicago. Given the congregate nature of the setting, high transmissibility of measles, and low measles vaccination coverage among shelter residents, measles virus had the potential to spread rapidly among approximately 2,100 presumed exposed shelter residents...
May 16, 2024: MMWR. Morbidity and Mortality Weekly Report
https://read.qxmd.com/read/38753486/linc-adain-a-human-adipose-lincrna-regulates-adipogenesis-by-modulating-klf5-and-il-8-mrna-stability
#19
JOURNAL ARTICLE
Marcella E O'Reilly, Sebastian Ho, Johana Coronel, Lucie Zhu, Wen Liu, Chenyi Xue, Eunyoung Kim, Esther Cynn, Caio V Matias, Rajesh Kumar Soni, Chen Wang, Iuliana Ionita-Laza, Robert C Bauer, Leila Ross, Yiying Zhang, Silvia Corvera, Susan K Fried, Muredach P Reilly
Adipose tissue remodeling and dysfunction, characterized by elevated inflammation and insulin resistance, play a central role in obesity-related development of type 2 diabetes (T2D) and cardiovascular diseases. Long intergenic non-coding RNAs (lincRNAs) are important regulators of cellular functions. Here, we describe the functions of linc-ADAIN (adipose anti-inflammatory), an adipose lincRNA that is downregulated in white adipose tissue of obese humans. We demonstrate that linc-ADAIN knockdown (KD) increases KLF5 and interleukin-8 (IL-8) mRNA stability and translation by interacting with IGF2BP2...
May 14, 2024: Cell Reports
https://read.qxmd.com/read/38753480/ultra-compact-pulse-charger-for-lithium-polymer-battery-with-simple-built-in-resistance-compensation-in-biomedical-applications
#20
JOURNAL ARTICLE
Yemin Kim, Junhyuck Lee, Byunghun Lee
Active implantable medical devices (AIMDs) rely on batteries for uninterrupted operation and patient safety. Therefore, it is critical to ensure battery safety and longevity. To achieve this, constant current/constant voltage (CC/CV) methods have been commonly used and research has been conducted to compensate for the effects of built-in resistance (BIR) of batteries. However, conventional CC/CV methods may pose the risk of lithium plating. Furthermore, conventional compensation methods for BIR require external components, complex algorithms, or large chip sizes, which inhibit the miniaturization and integration of AIMDs...
May 16, 2024: IEEE Transactions on Biomedical Circuits and Systems
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