keyword
https://read.qxmd.com/read/38582514/radical-mediated-degradation-of-thiol-maleimide-hydrogels
#41
JOURNAL ARTICLE
Tayler S Hebner, Bruce E Kirkpatrick, Benjamin D Fairbanks, Christopher N Bowman, Kristi S Anseth, Danielle S W Benoit
Michael addition between thiol- and maleimide-functionalized molecules is a long-standing approach used for bioconjugation, hydrogel crosslinking, and the functionalization of other advanced materials. While the simplicity of this chemistry enables facile synthesis of hydrogels, network degradation is also desirable in many instances. Here, the susceptibility of thiol-maleimide bonds to radical-mediated degradation is reported. Irreversible degradation in crosslinked materials is demonstrated using photoinitiated and chemically initiated radicals in hydrogels and linear polymers...
April 6, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38578432/magnetic-silica-coated-fluorescent-microspheres-magsiglow-for-simultaneous-detection-of-tumor-associated-proteins
#42
JOURNAL ARTICLE
Elias A Halabi, Isabel Gessner, Katherine Yang, Jae-Jun Kim, Rupsa Jana, Hannah M Peterson, Joshua Spitzberg, Ralph Weissleder
Multiplexed bead assays for solution-phase biosensing often encounter cross-over reactions during signal amplification, leading to false positives and high background signals. Current solutions involve complex, custom-designed equipment or costly setups, limiting their application in simple laboratory environments. In this study, we introduce a straightforward protocol to adapt a multiplexed single-bead assay to standard fluorescence imaging plates, enabling the simultaneous analysis of thousands of reactions per plate...
April 5, 2024: Angewandte Chemie
https://read.qxmd.com/read/38574342/tailored-branched-polymer-protein-bioconjugates-for-tunable-sieving-performance
#43
JOURNAL ARTICLE
Kriti Kapil, Hironobu Murata, Grzegorz Szczepaniak, Alan J Russell, Krzysztof Matyjaszewski
Protein-polymer conjugates combine the unique properties of both proteins and synthetic polymers, making them important materials for biomedical applications. In this work, we synthesized and characterized protein-branched polymer bioconjugates that were precisely designed to retain protein functionality while preventing unwanted interactions. Using chymotrypsin as a model protein, we employed a controlled radical branching polymerization (CRBP) technique utilizing a water-soluble inibramer, sodium 2-bromoacrylate...
April 4, 2024: ACS Macro Letters
https://read.qxmd.com/read/38573069/deconvoluting-the-effect-of-cell-penetrating-peptides-for-enhanced-and-controlled-insertion-of-large-scale-dna-nanopores
#44
JOURNAL ARTICLE
Xialin Zhang, Mette Galsgaard Malle, Rasmus P Thomsen, Rasmus Schøler Sørensen, Emily Winther Sørensen, Nikos S Hatzakis, Jørgen Kjems
DNA nanopores have emerged as powerful tools for molecular sensing, but the efficient insertion of large DNA nanopores into lipid membranes remains challenging. In this study, we investigate the potential of cell-penetrating peptides (CPPs), specifically SynB1 and GALA, to enhance the insertion efficiency of large DNA nanopores. We constructed SynB1- or GALA-functionalized DNA nanopores with an 11 nm inner diameter and visualized and quantified their membrane insertion using a TIRF microscopy-based single-liposome assay...
April 4, 2024: ACS Applied Materials & Interfaces
https://read.qxmd.com/read/38557019/-in-vivo-toxicology-of-metabolizable-atomically-precise-au-25-clusters-at-ultrahigh-doses
#45
JOURNAL ARTICLE
Miaoyu Wang, Fangzhen Tian, Qi Xin, Huizhen Ma, Ling Liu, Shuyu Yang, Si Sun, Nan Song, KeXin Tan, Zhenhua Li, Lijie Zhang, Qi Wang, Liefeng Feng, Hao Wang, Zhidong Wang, Xiao-Dong Zhang
Ultrasmall Au25 (MPA)18 clusters show great potential in biocatalysts and bioimaging due to their well-defined, tunable structure and properties. Hence, in vivo pharmacokinetics and toxicity of Au nanoclusters (Au NCs) are very important for clinical translation, especially at high dosages. Herein, the in vivo hematological, tissue, and neurological effects following exposure to Au NCs (300 and 500 mg kg-1 ) were investigated, in which the concentration is 10 times higher than in therapeutic use. The biochemical and hematological parameters of the injected Au NCs were within normal limits, even at the ultrahigh level of 500 mg kg-1 ...
April 1, 2024: Bioconjugate Chemistry
https://read.qxmd.com/read/38555519/rna-nanostructures-for-targeted-drug-delivery-and-imaging
#46
REVIEW
Laura Teodori, Marjan Omer, Jørgen Kjems
The RNA molecule plays a pivotal role in many biological processes by relaying genetic information, regulating gene expression, and serving as molecular machines and catalyzers. This inherent versatility of RNA has fueled significant advancements in the field of RNA nanotechnology, driving the engineering of complex nanoscale architectures toward biomedical applications, including targeted drug delivery and bioimaging. RNA polymers, serving as building blocks, offer programmability and predictability of Watson-Crick base pairing, as well as non-canonical base pairing, for the construction of nanostructures with high precision and stoichiometry...
January 2024: RNA Biology
https://read.qxmd.com/read/38551557/peptide-conjugated-nanoparticle-platforms-for-targeted-delivery-imaging-and-biosensing-applications
#47
JOURNAL ARTICLE
Bogdan Dragoș Ilieș, Ibrahim Yildiz, Manzar Abbas
Peptides have become an indispensable tool in engineering of multifunctional nanostructure platforms for biomedical applications such as targeted drug and gene delivery, imaging and biosensing. They can be covalently incorporated into a variety of nanoparticles (NPs) including polymers, metallic nanoparticles, and others. Using different bioconjugation techniques, multifunctional peptide-modified NPs can be formulated to produce therapeutical and diagnostic platforms offering high specificity, lower toxicity, biocompatibility, and stimuli responsive behavior...
March 29, 2024: Chembiochem: a European Journal of Chemical Biology
https://read.qxmd.com/read/38548654/a-genetically-encoded-photocaged-cysteine-for-facile-site-specific-introduction-of-conjugation-ready-thiol-residues-in-antibodies
#48
JOURNAL ARTICLE
Arianna O Osgood, Soumya Jyoti Singha Roy, David Koo, Renpeng Gu, Abhishek Chatterjee
Antibody-drug conjugates (ADCs) have emerged as a powerful class of anticancer therapeutics that enable the selective delivery of toxic payloads into target cells. There is increasing appreciation for the importance of synthesizing such ADCs in a defined manner where the payload is attached at specific permissive sites on the antibody with a defined drug to antibody ratio. Additionally, the ability to systematically alter the site of attachment is important to fine-tune the therapeutic properties of the ADC...
March 28, 2024: Bioconjugate Chemistry
https://read.qxmd.com/read/38546823/drug-polymer-nanodroplet-formation-and-morphology-drive-solubility-enhancement-of-gdc-0810
#49
JOURNAL ARTICLE
Kaylee E Barr, Monica L Ohnsorg, Lucy Liberman, Louis G Corcoran, Apoorva Sarode, Karthik Nagapudi, Christina R Feder, Frank S Bates, Theresa M Reineke
Nanodroplet formation is important to achieve supersaturation of active pharmaceutical ingredients (APIs) in an amorphous solid dispersion. The aim of the current study was to explore how polymer composition, architecture, molar mass, and surfactant concentration affect polymer-drug nanodroplet morphology with the breast cancer API, GDC-0810. The impact of nanodroplet size and morphology on dissolution efficacy and drug loading capacity was explored using polarized light microscopy, dynamic light scattering, and cryogenic transmission electron microscopy...
March 28, 2024: Bioconjugate Chemistry
https://read.qxmd.com/read/38546096/a-self-powered-electrochemical-aptasensor-for-the-detection-of-17%C3%AE-estradiol-based-on-carbon-nanocages-gold-nanoparticles-and-dna-bioconjugate-mediated-biofuel-cells
#50
JOURNAL ARTICLE
Yongju Wu, Dan Luo, Jinfei Yi, Rong Li, Dan Yang, Pengfei Pang, Hongbin Wang, Wenrong Yang, Yanli Zhang
17β-Estradiol (E2) is an important endogenous estrogen, which disturbs the endocrine system and poses a threat to human health because of its accumulation in the human body. Herein, a biofuel cell (BFC)-based self-powered electrochemical aptasensor was developed for E2 detection. Porous carbon nanocage/gold nanoparticle composite modified indium tin oxide (CNC/AuNP/ITO) and glucose oxidase modified CNC/AuNP/ITO were used as the biocathode and bioanode of BFCs, respectively. [Fe(CN)6 ]3- was selected as an electroactive probe, which was entrapped in the pores of positively charged magnetic Fe3 O4 nanoparticles (PMNPs) and then capped with a negatively charged E2 aptamer to form a DNA bioconjugate...
March 28, 2024: Analyst
https://read.qxmd.com/read/38543342/anticancer-potential-of-antimicrobial-peptides-focus-on-buforins
#51
REVIEW
Ana Maria Tolos Vasii, Cristian Moisa, Mihaela Dochia, Carmen Popa, Lucian Copolovici, Dana Maria Copolovici
In seeking alternative cancer treatments, antimicrobial peptides (AMPs), sourced from various life forms, emerge as promising contenders. These endogenous peptides, also known as host defense peptides (HDPs), play crucial roles in immune defenses against infections and exhibit potential in combating cancers. With their diverse defensive functions, plant-derived AMPs, such as thionins and defensins, offer a rich repertoire of antimicrobial properties. Insects, amphibians, and animals contribute unique AMPs like cecropins, temporins, and cathelicidins, showcasing broad-spectrum activities against bacteria, fungi, and viruses...
March 7, 2024: Polymers
https://read.qxmd.com/read/38542972/mass-spectrometry-based-research-of-cosmetic-ingredients
#52
REVIEW
Alina Florina Serb, Marius Georgescu, Robert Onulov, Cristina Ramona Novaconi, Eugen Sisu, Alexandru Bolocan, Raluca Elena Sandu
Cosmetic products are chemical substances or mixtures used on the skin, hair, nails, teeth, and the mucous membranes of the oral cavity, whose use is intended to clean, protect, correct body odor, perfume, keep in good condition, or change appearance. The analysis of cosmetic ingredients is often challenging because of their huge complexity and their adulteration. Among various analytical tools, mass spectrometry (MS) has been largely used for compound detection, ingredient screening, quality control, detection of product authenticity, and health risk evaluation...
March 17, 2024: Molecules: a Journal of Synthetic Chemistry and Natural Product Chemistry
https://read.qxmd.com/read/38530114/cysteine-independent-crispr-associated-protein-labeling-for-presentation-and-co-delivery-of-molecules-toward-genetic-and-epigenetic-regulations
#53
JOURNAL ARTICLE
Sadiya Tanga, Arpita Hota, Arkadeep Karmakar, Paramita Banerjee, Basudeb Maji
Labeling of CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) associated proteins (Cas) is a huge challenge for their genome engineering applications. Cysteine-mediated bioconjugation is the most efficient strategy for labeling Cas proteins. Introducing a cysteine residue in the protein at the right place might be challenging without perturbing the enzymatic activity. We report a method that does not require cysteine residues for small molecule presentation on the CRISPR-associated protein SpCas9 for in vitro protein detection, probing cellular protein expression, and nuclear co-delivery of molecules in mammalian cells...
March 26, 2024: Chembiochem: a European Journal of Chemical Biology
https://read.qxmd.com/read/38529790/an-organometallic-swap-strategy-for-bottlebrush-polymer-protein-conjugate-synthesis
#54
JOURNAL ARTICLE
Bin Liu, Jacob Rodriguez, Landon J Kilgallon, Wencong Wang, Yuyan Wang, Aiden Wang, Yutong Dai, Hung V-T Nguyen, Bradley L Pentelute, Jeremiah A Johnson
Polymer-protein bioconjugation offers a powerful strategy to alter the physical properties of proteins, and various synthetic polymer compositions and architectures have been investigated for this purpose. Nevertheless, conjugation of molecular bottlebrush polymers (BPs) to proteins remains an unsolved challenge due to the large size of BPs and a general lack of methods to transform the chain ends of BPs into functional groups suitable for bioconjugation. Here, we present a strategy to address this challenge in the context of BPs prepared by "graft-through" ring-opening metathesis polymerization (ROMP), one of the most powerful methods for BP synthesis...
March 26, 2024: Chemical Communications: Chem Comm
https://read.qxmd.com/read/38526728/preparation-of-bioconjugates-of-chimeric-m13-phage-and-gold-nanorods
#55
JOURNAL ARTICLE
Huan Peng, Irene A Chen
Phage-nanomaterial conjugates are functional bio-nanofibers with various applications. While phage display can select for phages with desired genetically encoded functions and properties, nanomaterials can endow the phages with additional features at nanoscale dimensions. Therefore, combining phages with nanotechnology can construct bioconjugates with unique characteristics. One strategy for filamentous phages is to adsorb nanoparticles onto the side wall, composed of pVIII subunits, through electrostatic interactions...
2024: Methods in Molecular Biology
https://read.qxmd.com/read/38525968/correction-to-modular-click-assembly-dna-encoded-glycoconjugate-libraries-with-on-dna-functional-group-transformations
#56
Xing Ling, Sixiu Liu, Yixuan Yang, Qian Dong, Lisa A Marcaurelle, Wei Huang, Yun Ding, Xuan Wang, Xiaojie Lu
No abstract text is available yet for this article.
March 25, 2024: Bioconjugate Chemistry
https://read.qxmd.com/read/38522178/controlling-spatial-distribution-of-functional-lipids-in-a-supported-lipid-bilayer-prepared-from-vesicles
#57
JOURNAL ARTICLE
Hyun-Su Lee, Ye Chan Kim, Zhicheng Wang, Jacob S Brenner, Vladimir R Muzykantov, Jacob W Myerson, Russell J Composto
Conjugating biomolecules, such as antibodies, to bioconjugate moieties on lipid surfaces is a powerful tool for engineering the surface of diverse biomaterials, including cells and nanoparticles. We developed supported lipid bilayers (SLBs) presenting well-defined spatial distributions of functional moieties as models for precisely engineered functional biomolecular-lipid surfaces. We used quartz crystal microbalance with dissipation (QCM-D) and atomic force microscopy (AFM) to determine how vesicles containing a mixture of 1,2-dipalmitoyl-sn-glycero-3-phosphatidylcholine (DPPC) and 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[azido(polyethylene glycol)-2000] (DSPE-PEG-N3 ) form SLBs as a function of the lipid phase transition temperature (Tm )...
March 11, 2024: Journal of Colloid and Interface Science
https://read.qxmd.com/read/38518938/poly-acrylamide-co-poly-hydroxyethyl-methacrylate-co-poly-cyclohexyl-methacrylate-hydrogel-platform-for-stability-storage-and-biocatalytic-applications-of-urease
#58
JOURNAL ARTICLE
Aradhana Chaudhary, Krishna Kumar, Vinai K Singh, Shailja Rai, Vinod Kumar, Kranthikumar Tungala, Anupam Das, Tushar Jana
In our present work, an explicit crosslinked thermo-responsive hydrogel platform has been developed, by using polyacrylamide (PAAm), poly(2-hydroxyethyl methacrylate) (PHEMA) and poly(cyclohexyl methacrylate) (PCHMA), and then coupled with urease to yield bioconjugates (BCs). Synergic effect of these polymer units provides thermoresponsive nature, optimum crosslinking with desired swelling behaviour, and stability and improved catalytic to Urease in the resultant BCs. Synthesis of the terpolymer has been achieved by employing HEMA (monomer as well as crosslinker), instead of using the conventional crosslinkers, through free radical solution polymerization technique...
March 20, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38518220/hyper-responsive-chemiluminescent-probe-reveals-distinct-pyrase-activity-in-pseudomonas-aeruginosa
#59
JOURNAL ARTICLE
Rozan Tannous, Omri Shelef, Tal Kopp, Micha Fridman, Doron Shabat
Pyrrolidone carboxyl peptidase, commonly known as PYRase, is an exopeptidase that catalytically cleaves an N -terminal pyroglutamic acid from peptides or proteins. The diverse functions of PYRases in bacterial enzymology have prompted the development of various bacterial diagnostic techniques. However, the specific physiological role and activity of this enzyme across the bacterial kingdom remain unclear. Here, we present a functional phenoxy-1,2-dioxetane chemiluminescent probe (PyrCL) that can selectively detect PYRase activity in both Gram-positive and Gram-negative bacteria...
March 22, 2024: Bioconjugate Chemistry
https://read.qxmd.com/read/38517205/cyclopropenes-as-chemical-reporters-for-dual-bioorthogonal-and-orthogonal-metabolic-labelling-of-dna
#60
JOURNAL ARTICLE
Nicola Seul, Dennis Lamade, Petko Stoychev, Michaela Mijic, Rita Michenfelder, Lisa Rieger, Philipp Geng, Hans-Achim Wagenknecht
Dual bioorthogonal labeling enables the investigation and understanding of interactions in the biological environment that are not accessible by a single label. However, applying two bioorthogonal reactions in the same environment remains challenging due to cross-reactivity. We developed a pair of two differently modified 2'‑deoxynucleosides that solved this issue for dual and orthogonal labeling of DNA. Inverse-electron demand Diels-Alder and photoclick reactions were combined to attach two different fluorogenic labels to genomic DNA in cells...
March 22, 2024: Angewandte Chemie
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