keyword
https://read.qxmd.com/read/38686915/investigating-the-role-of-functional-mutations-in-leucine-binding-to-sestrin2-in-aging-and-age-associated-degenerative-pathologies-using-structural-and-molecular-simulation-approaches
#1
JOURNAL ARTICLE
Abbas Khan, Muhammad Ammar Zahid, Muhammad Shahab, Raed M Al-Zoubi, Mohanad Shkoor, Tarek Benameur, Abdelali Agouni
Leucine is the native known ligand of Sestrin2 (Sesn2) and its interaction with Sesn2 is particularly important, as it influences the activity of mTOR in aging and its associated pathologies. It is important to find out how leucine interacts with Sesn2 and how mutations in the binding pocket of leucine affect the binding of leucine. Therefore, this study was committed to investigating the impact of non-synonymous mutations by incorporating a broad spectrum of simulation techniques, from molecular dynamics to free energy calculations...
April 30, 2024: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/38667938/deciphering-the-genomic-landscape-and-virulence-mechanisms-of-the-wheat-powdery-mildew-pathogen-blumeria-graminis-f-sp-tritici-wtn1-insights-from-integrated-genome-assembly-and-conidial-transcriptomics
#2
JOURNAL ARTICLE
Perumal Nallathambi, Chandrasekaran Umamaheswari, Bhaskar Reddy, Balakrishnan Aarthy, Mohammed Javed, Priya Ravikumar, Santosh Watpade, Prem Lal Kashyap, Govindaraju Boopalakrishnan, Sudheer Kumar, Anju Sharma, Aundy Kumar
A high-quality genome sequence from an Indian isolate of Blumeria graminis f. sp. tritici Wtn1, a persistent threat in wheat farming, was obtained using a hybrid method. The assembly of over 9.24 million DNA-sequence reads resulted in 93 contigs, totaling a 140.61 Mb genome size, potentially encoding 8480 genes. Notably, more than 73.80% of the genome, spanning approximately 102.14 Mb, comprises retro-elements, LTR elements, and P elements, influencing evolution and adaptation significantly. The phylogenomic analysis placed B...
April 3, 2024: Journal of Fungi (Basel, Switzerland)
https://read.qxmd.com/read/38655663/the-lat1-inhibitor-jph203-suppresses-the-growth-of-castration-resistant-prostate-cancer-through-a-cd24-mediated-mechanism
#3
JOURNAL ARTICLE
Shinpei Saito, Keisuke Ando, Shinichi Sakamoto, Minhui Xu, Yasutaka Yamada, Junryo Rii, Sanji Kanaoka, Jiaxing Wei, Xue Zhao, Sangjon Pae, Manato Kanesaka, Yusuke Goto, Tomokazu Sazuka, Yusuke Imamura, Yoshie Reien, Norie Hamaguchi-Suzuki, Shota Saito, Yuri Hirayama, Hirofumi Hashimoto, Yoshikatsu Kanai, Tomohiko Ichikawa, Naohiko Anzai
L-type amino acid transporter 1 (LAT1) is specifically expressed in many malignancies, contributes to the transport of essential amino acids, such as leucine, and regulates the mammalian target of rapamycin (mTOR) signaling pathway. We investigated the expression profile and functional role of LAT1 in prostate cancer using JPH203, a specific inhibitor of LAT1. LAT1 was highly expressed in castration-resistant prostate cancer (CRPC) cells, including C4-2 and PC-3 cells, but its expression level was low in castration-sensitive LNCaP cells...
April 24, 2024: Cancer Science
https://read.qxmd.com/read/38654380/integrated-multi-omics-analysis-and-machine-learning-developed-a-prognostic-model-based-on-mitochondrial-function-in-a-large-multicenter-cohort-for-gastric-cancer
#4
MULTICENTER STUDY
Yimeng Ma, Jingjing Jin, Zixuan Xue, Jungang Zhao, Weiyang Cai, Wanli Zhang
BACKGROUND: Gastric cancer (GC) is a common and aggressive type of cancer worldwide. Despite recent advancements in its treatment, the prognosis for patients with GC remains poor. Understanding the mechanisms of cell death in GC, particularly those related to mitochondrial function, is crucial for its development and progression. However, more research is needed to investigate the significance of the interaction between mitochondrial function and GC cell death. METHODS: We employed a robust computational framework to investigate the role of mitochondria-associated proteins in the progression of GC in a cohort of 1,199 GC patients...
April 23, 2024: Journal of Translational Medicine
https://read.qxmd.com/read/38587072/flrt2-prevents-endothelial-cell-senescence-and-vascular-aging-by-regulating-the-itgb4-mtorc2-p53-signaling-pathway
#5
JOURNAL ARTICLE
Hyun Jung Hwang, Donghee Kang, Jae-Ryong Kim, Joon Hyuk Choi, Ji-Kan Ryu, Allison B Herman, Young-Gyu Ko, Heon Joo Park, Myriam Gorospe, Jae-Seon Lee
The roles of fibronectin leucine-rich transmembrane protein 2 (FLRT2) in physiological and pathological processes are not well known. Here, we identify a potentially novel function of FLRT2 in preventing endothelial cell senescence and vascular aging. We found that FLRT2 expression was lower in cultured senescent endothelial cells as well as in aged rat and human vascular tissues. FLRT2 mediated endothelial cell senescence via the mTOR complex 2, AKT, and p53 signaling pathway in human endothelial cells. We uncovered that FLRT2 directly associated with integrin subunit beta 4 (ITGB4) and thereby promoted ITGB4 phosphorylation, while inhibition of ITGB4 substantially mitigated the induction of senescence triggered by FLRT2 depletion...
April 8, 2024: JCI Insight
https://read.qxmd.com/read/38582781/the-autophagy-inhibitor-nsc185058-suppresses-mtorc1-mediated-protein-anabolism-in-cultured-skeletal-muscle
#6
JOURNAL ARTICLE
Patrick J Ryan, Selina Uranga, Sean T Stanelle, Megan H Lewis, Colleen L O'Reilly, Jessica M Cardin, J William Deaver, Aaron B Morton, James D Fluckey
The mammalian target of rapamycin (mTOR), and specifically the mTOR complex 1 (mTORC1) is the central regulator of anabolism in skeletal muscle. Among the many functions of this kinase complex is the inhibition of the catabolic process of autophagy; however, less work has been done in investigating the role of autophagy in regulating mTORC1 signaling. Using an in vitro model to better understand the pathways involved, we activated mTORC1 by several different means (growth factors, leucine supplementation, or muscle contraction), alone or with the autophagy inhibitor NSC185058...
April 6, 2024: Scientific Reports
https://read.qxmd.com/read/38563085/%C3%AE-hydroxy-%C3%AE-methylbutyrate-hmb-leads-to-phospholipase-d2-pld2-activation-and-alters-circadian-rhythms-in-myotubes
#7
JOURNAL ARTICLE
Meytal Cohen-Or, Nava Chapnik, Oren Froy
β-Hydroxy-β-methylbutyrate (HMB) is a breakdown product of leucine, which promotes muscle growth. Although some studies indicate that HMB activates AKT and mTOR, others show activation of the downstream effectors, P70S6K and S6, independent of mTOR. Our aim was to study the metabolic effect of HMB around the circadian clock in order to determine more accurately the signaling pathway involved. C2C12 myotubes were treated with HMB and clock, metabolic and myogenic markers were measured around the clock...
April 2, 2024: Food & Function
https://read.qxmd.com/read/38556586/fat-mass-and-obesity-associated-protein-fto-mediated-m-6-a-modification-of-circfam192a-promoted-gastric-cancer-proliferation-by-suppressing-slc7a5-decay
#8
JOURNAL ARTICLE
Xi Wu, Yuan Fang, Yunru Gu, Haoyang Shen, Yangyue Xu, Tingting Xu, Run Shi, Duo Xu, Jingxin Zhang, Kai Leng, Yongqian Shu, Pei Ma
Gastric cancer (GC) is a common malignant tumor worldwide, especially in East Asia, with high incidence and mortality rate. Epigenetic modifications have been reported to participate in the progression of gastric cancer, among which m6 A is the most abundant and important chemical modification in RNAs. Fat mass and obesity-associated protein (FTO) is the first identified RNA demethylase but little is known about its role in gastric cancer. In our study, data from TCGA and clinical samples showed that FTO was highly expressed in gastric cancer tissues...
April 1, 2024: Mol Biomed
https://read.qxmd.com/read/38540908/zein-derived-peptides-from-corn-promote-the-proliferation-of-c-2-c-12-myoblasts-via-crosstalk-of-mtorc1-and-mtorc2-signaling-pathways
#9
JOURNAL ARTICLE
Mohammad Sadiq Amin, Binbin Yu, Dongjing Wu, Yujia Lu, Wei Wu, Jing Wang, Yuhao Zhang, Yu Fu
Dietary protein supplementation has emerged as a promising strategy in combating sarcopenia. Furthermore, searching for alternatives of animal proteins has been a hot topic. The present study aimed to investigate the effects of zein peptides on C2 C12 myoblasts and explore their potential molecular mechanisms. The proliferative, cell cycle, and anti-apoptotic activities of zein peptides were evaluated. Peptidomics analysis and transcriptome sequencing were employed to explore the structure-activity relationship and underlying molecular mechanisms...
March 18, 2024: Foods (Basel, Switzerland)
https://read.qxmd.com/read/38535468/induction-of-autophagy-by-extract-from-corydalis-heterocarpa-for-skin-anti-aging
#10
JOURNAL ARTICLE
Kyeong Eun Yang, Soo-Bin Nam, Ga-Eun Lee, Gabsik Yang, Mee-Hyun Lee, Geul Bang, Jung Hoon Choi, Yong-Yeon Cho, Cheol-Jung Lee
The extracts of Corydalis heterocarpa , a salt-tolerant plant, exhibit diverse physiological properties, including anti-inflammatory, anticancer, and antiadipogenic effects. However, the anti-aging effects of C. heterocarpa extract (CHE) on human skin cells have not yet been investigated. In the present study, we determined that CHE inhibited senescence-associated β-galactosidase (SA-β-gal)-stained senescent human dermal fibroblasts (HDFs). Furthermore, CHE markedly suppressed the expression of major regulatory proteins involved in senescence, including p53, p21, and caveolin-1...
March 8, 2024: Marine Drugs
https://read.qxmd.com/read/38409323/identification-of-a-leucine-mediated-threshold-effect-governing-macrophage-mtor-signalling-and-cardiovascular-risk
#11
JOURNAL ARTICLE
Xiangyu Zhang, Divya Kapoor, Se-Jin Jeong, Alan Fappi, Jeremiah Stitham, Vasavi Shabrish, Ismail Sergin, Eman Yousif, Astrid Rodriguez-Velez, Yu-Sheng Yeh, Arick Park, Arif Yurdagul, Oren Rom, Slava Epelman, Joel D Schilling, Marco Sardiello, Abhinav Diwan, Jaehyung Cho, Nathan O Stitziel, Ali Javaheri, Irfan J Lodhi, Bettina Mittendorfer, Babak Razani
High protein intake is common in western societies and is often promoted as part of a healthy lifestyle; however, amino-acid-mediated mammalian target of rapamycin (mTOR) signalling in macrophages has been implicated in the pathogenesis of ischaemic cardiovascular disease. In a series of clinical studies on male and female participants ( NCT03946774 and NCT03994367 ) that involved graded amounts of protein ingestion together with detailed plasma amino acid analysis and human monocyte/macrophage experiments, we identify leucine as the key activator of mTOR signalling in macrophages...
February 2024: Nature metabolism
https://read.qxmd.com/read/38357569/leucine-regulates-lipid-metabolism-in-adipose-tissue-through-adipokine-mtor-sirt1-signaling-pathway-and-bile-acid-microbe-axis-in-a-finishing-pig-model
#12
JOURNAL ARTICLE
Yunju Yin, Saiming Gong, Mengmeng Han, Jingzun Wang, Hanjing Shi, Xianji Jiang, Liu Guo, Yehui Duan, Qiuping Guo, Qinghua Chen, Fengna Li
This study was conducted to explore the regulatory mechanism of leucine (Leu) on lipid metabolism of finishing pigs. Twenty-four Duroc × Landrace × Large cross pigs with an average body weight of 68.33 ± 0.97 kg were randomly allocated into 3 treatment groups with 8 replicates per group (1 pig per replicate). The dietary treatments were as follows: control group (CON), 0.25% Leu group and 0.50% Leu group. The experimental period was 42 d. The results showed as follows...
March 2024: Animal Nutrition
https://read.qxmd.com/read/38310810/pre-heating-stress-associated-with-acute-oral-leucine-supplementation-effects-in-rat-gastrocnemius-muscle-implications-for-protein-synthesis-signaling-pathways
#13
JOURNAL ARTICLE
Toshinori Yoshihara, Shohei Dobashi, Hisashi Naito
Skeletal muscle is a highly plastic tissue. The role of heat shock protein 72 (Hsp72) in heat stress-induced skeletal muscle hypertrophy has been well demonstrated; however, the precise mechanisms remain unclear. Essential amino acids, such as leucine, mainly mediate muscle protein synthesis. We investigated the effects of pre-heating and increased Hsp72 expression on the mechanistic target of rapamycin (mTOR) signaling and protein synthesis following leucine administration in rat gastrocnemius muscle. To ensure increased Hsp72 expression in both the red and white portions of the muscle, one leg of male Wistar rats (10-week-old, n = 23) was heat-stressed in 43 °C water for 30 min twice at a 48-h-interval (heat-stressed leg, HS leg)...
January 30, 2024: Journal of Thermal Biology
https://read.qxmd.com/read/38294699/chronic-cortisol-stimulation-enhances-hypothalamus-specific-enrichment-of-metabolites-in-the-rainbow-trout-brain
#14
JOURNAL ARTICLE
Ayelen M Blanco, Femilarani Antomagesh, Sara Comesaña, Jose L Soengas, Mathilakath M Vijayan
The hypothalamus is a key integrating centre that is involved in the initiation of the corticosteroid stress response, and in regulating nutrient homeostasis. While cortisol, the principal glucocorticoid in humans and teleosts, plays a central role in the feeding regulation, the mechanisms are far from clear. We tested the hypothesis that the metabolic changes to cortisol exposure signal an energy excess in the hypothalamus, leading to feeding suppression during stress in fish. Rainbow trout ( Oncorhynchus mykiss ) were administered a slow-release cortisol implant for three days, and the metabolite profiles in the plasma, hypothalamus, and the rest of the brain were assessed...
January 31, 2024: American Journal of Physiology. Endocrinology and Metabolism
https://read.qxmd.com/read/38269516/dnaja1-positively-regulates-amino-acid-stimulated-milk-protein-and-fat-synthesis-in-bovine-mammary-epithelial-cells
#15
JOURNAL ARTICLE
Zhuolin Li, Xiaohan Yuan, Yuanhao Wang, Zheya Sun, Jinxia Ao
Several cellular processes, including the recovery of misfolded proteins, the folding of polypeptide chains, transit of polypeptides across the membrane, construction and disassembly of protein complexes, and modulation of protein control, are carried out by DnaJ homolog subfamily A member 1 (DNAJA1), which belongs to the DnaJ heat-shock protein family. It is unknown if DNAJA1 regulates the production of milk in bovine mammary epithelium cells (BMECs). Methionine and leucine increased DNAJA1 expression and nuclear location, as seen by us...
January 2024: Cell Biochemistry and Function
https://read.qxmd.com/read/38230284/modulation-of-leucine-sensors-to-mitigate-antipsychotics-induced-metabolic-syndrome-a-new-vista
#16
JOURNAL ARTICLE
Shokouh Arjmand, Caroline Biojone, Gregers Wegener
Second-generation antipsychotics (SGAs) are currently the mainstay in the pharmacotherapy of some psychiatric disorders, which have improved the quality of life of millions of patients globally. A broad spectrum of activity and diminished liabilities of extrapyramidal side effects have made SGAs better alternatives compared to first-generation antipsychotics. Nevertheless, they display a complex profile of activity by affecting an array of biological targets and, as a result, are associated with a constellation of metabolic abnormalities such as hyperglycemia, dyslipidemia, weight gain, and cardiovascular problems...
January 12, 2024: ACS Pharmacology & Translational Science
https://read.qxmd.com/read/38201913/tyrosine-is-a-booster-of-leucine-induced-muscle-anabolic-response
#17
JOURNAL ARTICLE
Kotaro Tamura, Hidefumi Kitazawa, Satoshi Sugita, Kohjiro Hashizume, Masazumi Iwashita, Takaaki Ishigami, Yoshihiko Minegishi, Akira Shimotoyodome, Noriyasu Ota
Leucine (Leu), an essential amino acid, is known to stimulate protein synthesis in the skeletal muscle via mTOR complex 1 (mTORC1) activation. However, the intrinsic contribution of other amino acids to Leu-mediated activation of mTORC1 signaling remains unexplored. This study aimed to identify amino acids that can promote mTORC1 activity in combination with Leu and to assess the effectiveness of these combinations in vitro and in vivo. We found that tyrosine (Tyr) enhanced Leu-induced phosphorylation of S6 kinase (S6K), an indicator of mTORC1 activity, although it exerted no such effect individually...
December 26, 2023: Nutrients
https://read.qxmd.com/read/38193973/the-role-of-basic-leucine-zipper-transcription-factor-e4bp4-in-cancer-a-review-and-update
#18
REVIEW
Liang Wang, Peifen Li, Xueying Zhang, Zhenwu Gu, Xinyu Pan, Yihao Wu, Huanan Li
Mutations in the genes of tumor cells and the disorder of immune microenvironment are the main factors of tumor development. The sensitivity of tumor cells to chemotherapy drugs affect the treatment of tumor. Nuclear transcription factor E4BP4 is dysregulated in a variety of malignant tumors. It can suppress the transcription of NFKBIA, RASSF8, SOSTDC1, FOXO-induced genes (TRAIL, FAS, GADD45a and GADD45b) and Hepcidin, up-regulate RCAN1-1 and PRNP, activate mTOR and p38 in cancer cells. Also, E4BP4 can regulate tumor immune microenvironment...
January 9, 2024: Molecular Biology Reports
https://read.qxmd.com/read/38188514/kinetic-modeling-of-leucine-mediated-signaling-and-protein-metabolism-in-human-skeletal-muscle
#19
JOURNAL ARTICLE
Taylor J McColl, David C Clarke
Skeletal muscle protein levels are governed by the relative rates of muscle protein synthesis (MPS) and breakdown (MPB). The mechanisms controlling these rates are complex, and their integrated behaviors are challenging to study through experiments alone. The purpose of this study was to develop and analyze a kinetic model of leucine-mediated mTOR signaling and protein metabolism in the skeletal muscle of young adults. Our model amalgamates published cellular-level models of the IRS1-PI3K-Akt-mTORC1 signaling system and of skeletal-muscle leucine kinetics with physiological-level models of leucine digestion and transport and insulin dynamics...
January 19, 2024: IScience
https://read.qxmd.com/read/38185283/pseudo-targeted-metabolic-profile-differences-between-emergency-patients-with-type-1-and-type-2-myocardial-infarction-diagnosed-by-optical-coherence-tomography
#20
JOURNAL ARTICLE
Jifei Wang, Zhaoying Li, Guang Yang, Chao Fang, Yanwei Yin, Zhilei Zheng, Hongwei Wang, Shaohong Fang, Jiannan Dai, Shanjie Wang, Shuang Yang, Bo Yu
BACKGROUND: It is difficult to distinguish type 2 myocardial infarction (T2MI) from type 1 myocardial infarction (T1MI), although their management varies. OBJECTIVES: Using optical coherence tomography (OCT) and pseudo-targeted metabolomics to identify biomarkers, investigate metabolic differences, and establish a T2MI subclassification. METHODS: Among 1519 patients with MI, 97 T2MI patients are identified who are 1:1 matched with 97 T1MI patients after considering age, gender, ST-segment elevation, time from onset to coronary angiography, and hs-cTnI on admission by propensity score matching...
January 5, 2024: Clinica Chimica Acta; International Journal of Clinical Chemistry
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