keyword
https://read.qxmd.com/read/38652417/in-vitro-activity-of-cefiderocol-against-carbapenem-resistant-acinetobacter-baumannii-carrying-various-%C3%AE-lactamase-encoding-genes
#61
JOURNAL ARTICLE
Aylin Uskudar-Guclu, Salih Danyildiz, Hasan Cenk Mirza, Mehtap Akcil Ok, Ahmet Basustaoglu
OBJECTIVES: This study aimed to determine the in vitro efficacy of cefiderocol in carbapenem-resistant Acinetobacter baumannii (CRAB) isolates and evaluate the disk-diffusion (DD) method as an alternative method to broth-microdilution (BMD). METHODS: Totally 89 CRAB isolates were included. Cluster analysis was determined by Pulsed-Field Gel Electrophoresis (PFGE). Resistance genes; blaOXA-51 , blaOXA-23 , blaOXA-24 , blaOXA-58, blaPER-1 , blaNDM , blaIMP and mcr-1 were screened...
April 23, 2024: European Journal of Clinical Microbiology & Infectious Diseases
https://read.qxmd.com/read/38651885/first-report-of-the-chromosomal-integration-of-carbapenemase-gene-bla-imp-19-in-acinetobacter-baumannii-ab322-the-legacy-of-integron-in-phage-plasmid
#62
JOURNAL ARTICLE
Yung-Luen Shih, Carl Jay Ballena Bregente, Pek Kee Chen, Tran Thi Dieu Thuy, Yu-Chen Chen, Han-Yueh Kuo, Hsu-Feng Lu, Cheng-Yen Kao
UNLABELLED: Integration of carbapenemase gene bla IMP into the chromosome of carbapenem-resistant Acinetobacter baumannii (CRAB) has not been reported. The aim of this study was to explore the genomic characteristics of CRAB AB322 isolated from a Taiwanese patient diagnosed with bacteremia in 2011, whose chromosome harbors bla IMP-19 . Disk diffusion and broth microdilution were employed to analyze the antimicrobial susceptibility of AB322 to 14 antimicrobials. Nanopore whole-genome sequencing platform was utilized for AB322 genome sequencing, and conjugation was further performed to investigate the transferability of bla IMP-19 to amikacin-resistant A...
April 23, 2024: Microbiology Spectrum
https://read.qxmd.com/read/38649414/cerastecins-inhibit-membrane-lipooligosaccharide-transport-in-drug-resistant-acinetobacter-baumannii
#63
JOURNAL ARTICLE
Hao Wang, Andrii Ishchenko, Jason Skudlarek, Pamela Shen, Liudmila Dzhekieva, Ronald E Painter, Yun-Ting Chen, Marina Bukhtiyarova, Andrew Leithead, Rodger Tracy, Kerim Babaoglu, Carolyn Bahnck-Teets, Alexei Buevich, Tamara D Cabalu, Marc Labroli, Henry Lange, Ying Lei, Wei Li, Jian Liu, Paul A Mann, Tao Meng, Helen J Mitchell, James Mulhearn, Giovanna Scapin, Deyou Sha, Anthony W Shaw, Qian Si, Ling Tong, Chengwei Wu, Zhe Wu, Jing Chen Xiao, Min Xu, Li-Kang Zhang, David McKenney, Randy R Miller, Todd A Black, Andrew Cooke, Carl J Balibar, Daniel J Klein, Izzat Raheem, Scott S Walker
Carbapenem-resistant Acinetobacter baumannii infections have limited treatment options. Synthesis, transport and placement of lipopolysaccharide or lipooligosaccharide (LOS) in the outer membrane of Gram-negative bacteria are important for bacterial virulence and survival. Here we describe the cerastecins, inhibitors of the A. baumannii transporter MsbA, an LOS flippase. These molecules are potent and bactericidal against A. baumannii, including clinical carbapenem-resistant Acinetobacter baumannii isolates...
April 22, 2024: Nature Microbiology
https://read.qxmd.com/read/38648198/the-impact-of-phage-and-phage-resistance-on-microbial-community-dynamics
#64
JOURNAL ARTICLE
Ellinor O Alseth, Rafael Custodio, Sarah A Sundius, Rachel A Kuske, Sam P Brown, Edze R Westra
Where there are bacteria, there will be bacteriophages. These viruses are known to be important players in shaping the wider microbial community in which they are embedded, with potential implications for human health. On the other hand, bacteria possess a range of distinct immune mechanisms that provide protection against bacteriophages, including the mutation or complete loss of the phage receptor, and CRISPR-Cas adaptive immunity. While our previous work showed how a microbial community may impact phage resistance evolution, little is known about the inverse, namely how interactions between phages and these different phage resistance mechanisms affect the wider microbial community in which they are embedded...
April 2024: PLoS Biology
https://read.qxmd.com/read/38647541/biological-synthesis-of-silver-nanoparticles-from-lavandula-mairei-humbert-antibacterial-and-antioxidant-activities
#65
JOURNAL ARTICLE
Soufiane El Megdar, Lahbib Fayzi, Raja Elkheloui, Asma Laktib, Mohamed Bourouache, Abdellah El Boulani, Hicham Abou Oualid, Khalil Cherifi, Fouad Msanda, Mohamed Hassi, Rachida Mimouni, Fatima Hamadi
Hospital-acquired infections involving carbapenem-resistant Acinetobacter baumannii (A. baumannii) and extended spectrum beta-lactamase (ESBL)-producing Enterobacteriaceae pose significant challenges in the intensive care units. The lack of novel antimicrobial drugs amplifies the urgency to explore innovative management strategies. Nanotechnology, with its ability to generate nanoparticles possessing specific properties beneficial in drug delivery and nanomedicine, stands as a pivotal research domain. The objective of this study was to synthesize, for the first time, biologically silver nanoparticles (Ag-NPs) from Lavandula mairei Humbert (L...
April 22, 2024: Current Microbiology
https://read.qxmd.com/read/38645180/identification-of-determinants-that-allow-maintenance-of-high-level-fluoroquinolone-resistance-in-acinetobacter-baumannii
#66
Efrat Hamami, Wenwen Huo, Juan Hernandez-Bird, Arnold Castaneda, Jinna Bai, Sapna Syal, Juan C Ortiz-Marquez, Tim van Opijnen, Edward Geisinger, Ralph R Isberg
UNLABELLED: Acinetobacter baumannii is associated with multidrug resistant (MDR) infections in healthcare settings, with fluoroquinolones such as ciprofloxacin being currently ineffective. Clinical isolates largely harbor mutations in the GyrA and TopoIV fluoroquinolone targets, as well as mutations that increase expression of drug resistance-nodulation-division (RND) efflux pumps. Factors critical for maintaining fitness levels of pump overproducers are uncharacterized despite their prevalence in clinical isolates...
April 8, 2024: bioRxiv
https://read.qxmd.com/read/38641582/evidence-on-the-inhibitory-effect-of-brassica-plants-against-acinetobacter-baumannii-lipases-phytochemical-analysis-in-vitro-and-molecular-docking-studies
#67
JOURNAL ARTICLE
Manal M Sabry, Ali M El-Halawany, Walaa G Fahmy, Basma M Eltanany, Laura Pont, Fernando Benavente, Ahmed S Attia, Farag F Sherbiny, Rana M Ibrahim
BACKGROUND: Infections caused by Acinetobacter baumannii are becoming a rising public health problem due to its high degree of acquired and intrinsic resistance mechanisms. Bacterial lipases penetrate and damage host tissues, resulting in multiple infections. Because there are very few effective inhibitors of bacterial lipases, new alternatives for treating A. baumannii infections are urgently needed. In recent years, Brassica vegetables have received a lot of attention since their phytochemical compounds have been directly linked to diverse antimicrobial actions by inhibiting the growth of various Gram-positive and Gram-negative bacteria, yeast, and fungi...
April 19, 2024: BMC complementary medicine and therapies
https://read.qxmd.com/read/38640940/global-burden-associated-with-85-pathogens-in-2019-a-systematic-analysis-for-the-global-burden-of-disease-study-2019
#68
JOURNAL ARTICLE
(no author information available yet)
BACKGROUND: Despite a global epidemiological transition towards increased burden of non-communicable diseases, communicable diseases continue to cause substantial morbidity and mortality worldwide. Understanding the burden of a wide range of infectious diseases, and its variation by geography and age, is pivotal to research priority setting and resource mobilisation globally. METHODS: We estimated disability-adjusted life-years (DALYs) associated with 85 pathogens in 2019, globally, regionally, and for 204 countries and territories...
April 16, 2024: Lancet Infectious Diseases
https://read.qxmd.com/read/38639548/assessing-clinician-utilization-of-next-generation-antibiotics-against-resistant-gram-negative-infections-in-u-s-hospitals-a-retrospective-cohort-study
#69
JOURNAL ARTICLE
Jeffrey R Strich, Ahmed Mishuk, Guoqing Diao, Alexander Lawandi, Willy Li, Cumhur Y Demirkale, Ahmed Babiker, Alex Mancera, Bruce J Swihart, Morgan Walker, Christina Yek, Maniraj Neupane, Nathaniel De Jonge, Sarah Warner, Sameer S Kadri
BACKGROUND: The U.S. antibiotic market failure has threatened future innovation and supply. Understanding when and why clinicians underutilize recently approved gram-negative antibiotics might help prioritize the patient in future antibiotic development and potential market entry rewards. OBJECTIVE: To determine use patterns of recently U.S. Food and Drug Administration (FDA)-approved gram-negative antibiotics (ceftazidime-avibactam, ceftolozane-tazobactam, meropenem-vaborbactam, plazomicin, eravacycline, imipenem-relebactam-cilastatin, and cefiderocol) and identify factors associated with their preferential use (over traditional generic agents) in patients with gram-negative infections due to pathogens displaying difficult-to-treat resistance (DTR; that is, resistance to all first-line antibiotics)...
April 19, 2024: Annals of Internal Medicine
https://read.qxmd.com/read/38637066/comprehensive-identification-of-pathogenic-microbes-and-antimicrobial-resistance-genes-in-food-products-using-nanopore-sequencing-based-metagenomics
#70
JOURNAL ARTICLE
Annie Wing-Tung Lee, Iain Chi-Fung Ng, Evelyn Yin-Kwan Wong, Ivan Tak-Fai Wong, Rebecca Po-Po Sze, Kit-Yu Chan, Tsz-Yan So, Zhipeng Zhang, Sharon Ka-Yee Fung, Sally Choi-Ying Wong, Wing-Yin Tam, Hiu-Yin Lao, Lam-Kwong Lee, Jake Siu-Lun Leung, Chloe Toi-Mei Chan, Timothy Ting-Leung Ng, Jiaying Zhang, Franklin Wang-Ngai Chow, Polly Hang-Mei Leung, Gilman Kit-Hang Siu
Foodborne pathogens, particularly antimicrobial-resistant (AMR) bacteria, remain a significant threat to global health. Given the limitations of conventional culture-based approaches, which are limited in scope and time-consuming, metagenomic sequencing of food products emerges as a promising solution. This method provides a fast and comprehensive way to detect the presence of pathogenic microbes and antimicrobial resistance genes (ARGs). Notably, nanopore long-read sequencing provides more accurate bacterial taxonomic classification in comparison to short-read sequencing...
August 2024: Food Microbiology
https://read.qxmd.com/read/38636536/global-regional-and-national-incidence-and-mortality-burden-of-non-covid-19-lower-respiratory-infections-and-aetiologies-1990-2021-a-systematic-analysis-from-the-global-burden-of-disease-study-2021
#71
JOURNAL ARTICLE
(no author information available yet)
BACKGROUND: Lower respiratory infections (LRIs) are a major global contributor to morbidity and mortality. In 2020-21, non-pharmaceutical interventions associated with the COVID-19 pandemic reduced not only the transmission of SARS-CoV-2, but also the transmission of other LRI pathogens. Tracking LRI incidence and mortality, as well as the pathogens responsible, can guide health-system responses and funding priorities to reduce future burden. We present estimates from the Global Burden of Diseases, Injuries, and Risk Factors Study (GBD) 2021 of the burden of non-COVID-19 LRIs and corresponding aetiologies from 1990 to 2021, inclusive of pandemic effects on the incidence and mortality of select respiratory viruses, globally, regionally, and for 204 countries and territories...
April 15, 2024: Lancet Infectious Diseases
https://read.qxmd.com/read/38634975/clinical-effectiveness-of-cefiderocol-for-the-treatment-of-bloodstream-infections-due-to-carbapenem-resistant-acinetobacter-baumannii-during-the-covid-19-era-a-single-center-observational-study
#72
JOURNAL ARTICLE
Alessandra Oliva, L Liguori, S Covino, F Petrucci, F Cogliati-Dezza, A Curtolo, G Savelloni, M Comi, F Sacco, G Ceccarelli, A Viscido, F Alessandri, G Raponi, F Pugliese, C M Mastroianni, M Venditti
BACKGROUND: We assessed the clinical effectiveness of cefiderocol (CFDC) in comparison with colistin (COL) for the treatment of carbapenem-resistant Acinetobacter baumannii (CRAB) bloodstream infections (BSI). MATERIALS/METHODS: Retrospective cohort study including adults with CRAB-BSI. Outcomes were mortality, clinical cure and adverse events during therapy. The average treatment effect of CFDC compared to COL was weighted with the inverse-probability treatment weight (IPTW)...
April 18, 2024: European Journal of Clinical Microbiology & Infectious Diseases
https://read.qxmd.com/read/38632045/discovery-of-streptomyces-species-cs-62-a-novel-producer-of-the-acinetobacter-baumannii-selective-antibiotic-factumycin
#73
JOURNAL ARTICLE
Amir Y Alwali, Diane Santos, César Aguilar, Audrey Birch, Lorena Rodriguez-Orduña, Carson B Roberts, Ramya Modi, Cuauhtemoc Licona-Cassani, Elizabeth I Parkinson
Narrow spectrum antibiotics are of great interest given their ability to spare the microbiome and decrease widespread antibiotic resistance compared to broad spectrum antibiotics. Herein we screened an in-house library of Actinobacteria strains for selective activity against Acinetobacter baumannii and successfully identified Streptomyces sp. CS-62 as a producer of a natural product with this valuable activity. Analysis of the cultures via high resolution mass spectrometry and tandem mass spectrometry followed by comparison with molecules in the Natural Product Atlas (NP Atlas) and the Global Natural Products Social Molecular Networking (GNPS) platform suggested a novel natural product...
April 17, 2024: Journal of Industrial Microbiology & Biotechnology
https://read.qxmd.com/read/38630890/successful-treatment-of-carbapenem-resistant-acinetobacter-baumannii-meningitis-with-sulbactam-durlobactam
#74
JOURNAL ARTICLE
Pranita D Tamma, Shanan Immel, Sara M Karaba, Caitlin L Soto, Rick Conzemius, Emily Gisriel, Tsigereda Tekle, Haley Stambaugh, Emily Johnson, Jeffrey A Tornheim, Patricia J Simner
BACKGROUND: The treatment of carbapenem-resistant Acinetobacter baumannii/calcoaceticus complex (CRAB) presents significant treatment challenges. METHODS: We report the case of a 42-year-old woman with CRAB meningitis who experienced persistently positive cerebrospinal fluid (CSF) cultures for 13 days despite treatment with high-dose ampicillin-sulbactam and cefiderocol. On day 13, she was transitioned to sulbactam-durlobactam and meropenem; four subsequent CSF cultures remained negative...
April 17, 2024: Clinical Infectious Diseases
https://read.qxmd.com/read/38630176/co-production-of-metallo-%C3%AE-lactamase-and-oxa-type-%C3%AE-lactamases-in-carbapenem-resistant-acinetobacter-baumannii-clinical-isolates-in-north-east-india
#75
JOURNAL ARTICLE
Shyamalima Saikia, Indrani Gogoi, Amos Oloo, Mohan Sharma, Minakshi Puzari, Pankaj Chetia
Carbapenem-resistant Acinetobacter baumannii poses a significant threat to public health globally, especially due to its ability to produce multiple carbapenemases, leading to treatment challenges. This study aimed to investigate the antibiotic resistance pattern of carbapenem-resistant A. baumannii isolates collected from different clinical settings in North East India, focusing on their genotypic and phenotypic resistance profiles. A total of 172 multidrug-resistant A. baumannii isolates were collected and subjected to antibiotic susceptibility test using the Kirby-Bauer disk diffusion method...
April 17, 2024: World Journal of Microbiology & Biotechnology
https://read.qxmd.com/read/38628239/study-on-mngs-technique-in-diagnosing-pneumocystis-jirovecii-pneumonia-in-non-hiv-infected-patients
#76
JOURNAL ARTICLE
Shuai Li, Xue Han, Jing Ma, Guo-Hong Huang, Shu-Ting Yang, Chang-Min Wang
OBJECTIVE: To investigate the value of metagenomic Next-Generation Sequencing (mNGS) in diagnosing Pneumocystis jirovecii pneumonia (PJP) in non-human immunodeficiency virus (HIV)-infected patients. METHODS: In this retrospective study, non-HIV-infected patients with PJP and those diagnosed with non-PJP from August 2022 to December 2024 were selected as subjects. The presence of Pneumocystis jirovecii (PJ) and other co-pathogens in bronchoalveolar lavage fluid (BALF) was analyzed, and the diagnostic efficacy of NGS, polymerase chain reaction (PCR) and serum 1,3-β-D-glucan (BDG) in PJP was compared with the reference standard of clinical compound diagnosis...
2024: Infection and Drug Resistance
https://read.qxmd.com/read/38627251/dihydrophenazine-a-multifunctional-new-weapon-that-kills-multidrug-resistant-acinetobacter-baumannii-and-restores-carbapenem-and-oxidative-stress-susceptibilities
#77
JOURNAL ARTICLE
Norhan H Mahdally, Riham A ElShiekh, Bathini Thissera, Ashraf Eltaher, Aya Osama, Maha Mokhtar, Noha M Elhosseiny, Mona T Kashef, Sameh Magdeldin, Ali M El Halawany, Mostafa E Rateb, Ahmed S Attia
AIMS: The current work aims to fully characterize a new antimicrobial agent against Acinetobacter baumannii, which continues to represent a growing threat to healthcare settings worldwide. With minimal treatment options due to the extensive spread of resistance to almost all the available antimicrobials, the hunt for new antimicrobial agents is a high priority. METHODS AND RESULTS: An Egyptian soil-derived bacterium strain NHM-077B proved to be a promising source for a new antimicrobial agent...
April 16, 2024: Journal of Applied Microbiology
https://read.qxmd.com/read/38626068/antimicrobial-resistance-in-bacterial-wound-skin-soft-tissue-and-surgical-site-infections-in-central-eastern-southern-and-western-africa-a-systematic-review-and-meta-analysis
#78
JOURNAL ARTICLE
Edward J M Monk, Timothy P W Jones, Felix Bongomin, Winnie Kibone, Yakobo Nsubuga, Nelson Ssewante, Innocent Muleya, Lauryn Nsenga, V Bhargavi Rao, Kevin van Zandvoort
Antimicrobial resistance (AMR) is a major global threat and AMR-attributable mortality is particularly high in Central, Eastern, Southern and Western Africa. The burden of clinically infected wounds, skin and soft tissue infections (SSTI) and surgical site infections (SSI) in these regions is substantial. This systematic review reports the extent of AMR from sampling of these infections in Africa, to guide treatment. It also highlights gaps in microbiological diagnostic capacity. PubMed, MEDLINE and Embase were searched for studies reporting the prevalence of Staphylococcus aureus, Eschericheria coli, Klebsiella pneumoniae, Pseudomonas aeruginosa and Acinetobacter baumannii in clinically infected wounds, SSTI and SSI in Central, Eastern, Southern or Western Africa, and studies reporting AMR from such clinical isolates...
2024: PLOS Glob Public Health
https://read.qxmd.com/read/38622723/antimicrobial-resistance-prediction-by-clinical-metagenomics-in-pediatric-severe-pneumonia-patients
#79
JOURNAL ARTICLE
Mingyu Gan, Yanyan Zhang, Gangfeng Yan, Yixue Wang, Guoping Lu, Bingbing Wu, Weiming Chen, Wenhao Zhou
BACKGROUND: Antimicrobial resistance (AMR) is a major threat to children's health, particularly in respiratory infections. Accurate identification of pathogens and AMR is crucial for targeted antibiotic treatment. Metagenomic next-generation sequencing (mNGS) shows promise in directly detecting microorganisms and resistance genes in clinical samples. However, the accuracy of AMR prediction through mNGS testing needs further investigation for practical clinical decision-making. METHODS: We aimed to evaluate the performance of mNGS in predicting AMR for severe pneumonia in pediatric patients...
April 15, 2024: Annals of Clinical Microbiology and Antimicrobials
https://read.qxmd.com/read/38622637/antimicrobial-peptide-thanatin-fused-endolysin-pa90-tha-pa90-for-the-control-of-acinetobacter-baumannii-infection-in-mouse-model
#80
JOURNAL ARTICLE
Jeonghyun Lim, Heejoon Myung, Daejin Lim, Miryoung Song
BACKGROUND: This study addresses the urgent need for infection control agents driven by the rise of drug-resistant pathogens such as Acinetobacter baumannii. Our primary aim was to develop and assess a novel endolysin, Tha-PA90, designed to combat these challenges. METHODS: Tha-PA90 incorporates an antimicrobial peptide (AMP) called thanatin at its N-terminus, enhancing bacterial outer membrane permeability and reducing host immune responses. PA90 was selected as the endolysin component...
April 15, 2024: Journal of Biomedical Science
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