keyword
https://read.qxmd.com/read/38637501/rapid-evolutionary-change-in-trait-correlations-of-single-proteins
#1
JOURNAL ARTICLE
Pouria Dasmeh, Jia Zheng, Ayşe Nisan Erdoğan, Nobuhiko Tokuriki, Andreas Wagner
Many organismal traits are genetically determined and covary in evolving populations. The resulting trait correlations can either help or hinder evolvability - the ability to bring forth new and adaptive phenotypes. The evolution of evolvability requires that trait correlations themselves must be able to evolve, but we know little about this ability. To learn more about it, we here study two evolvable systems, a yellow fluorescent protein and the antibiotic resistance protein VIM-2 metallo beta-lactamase. We consider two traits in the fluorescent protein, namely the ability to emit yellow and green light, and three traits in our enzyme, namely the resistance against ampicillin, cefotaxime, and meropenem...
April 18, 2024: Nature Communications
https://read.qxmd.com/read/38635540/decreased-risk-of-underdosing-with-continuous-infusion-versus-intermittent-administration-of-cefotaxime-in-patients-with-sickle-cell-disease-and-acute-chest-syndrome
#2
JOURNAL ARTICLE
Keyvan Razazi, Enora Berti, Jerome Cecchini, Guillaume Carteaux, Anoosha Habibi, Pablo Bartolucci, Romain Arrestier, Ségolène Gendreau, Nicolas de Prost, Anne Hulin, Armand Mekontso Dessap
OBJECTIVE: Underdosing of antibiotics is common in patients with sickle cell disease (SCD). We hypothesized that in critically-ill patients with SCD receiving cefotaxime during acute chest syndrome, the continuous infusion may outperform the intermittent administration in achieving pharmacokinetic/pharmacodynamic targets. DESIGN: Prospective before-after study. SETTINGS: Intensive-care unit of a French teaching hospital and sickle cell disease referral center...
2024: PloS One
https://read.qxmd.com/read/38633192/-moringa-oleifera-as-a-potential-antimicrobial-against-pathogenic-clostridium-perfringens-isolates-in-farm-animals
#3
JOURNAL ARTICLE
Ghada A Ibrahim, Khadijah A Altammar
BACKGROUND: Clostridium perfringens (CP) is an emerging anaerobic pathogen that can aggravate severe fatal infections in different hosts and livestock. AIM: This paper was designed to monitor the antibacterial efficacy of Moringa oleifera ( M. oleifera ) plant against different CP isolates of variant toxin genotypes comparing that with commercial antibiotics in the veterinary field. METHODS: A total of 200 examined fecal, intestinal, and liver samples from cattle, sheep, and goats were investigated bacteriologically and biochemically for CP ...
January 2024: Open Veterinary Journal
https://read.qxmd.com/read/38627930/in-vitro-antibacterial-activity-of-antibiotics-and-plant-essential-oils-against-escherichia-coli-mtcc443-supported-through-the-molecular-docking-and-pharmacokinetics-study
#4
JOURNAL ARTICLE
Saurabh Jain, Adarsh Kumar Shukla, Surbhi Panwar, Rajesh Kumar, Ashwani Kumar
Most of the Escherichia coli turned into serious pathogens or developed antibiotic resistance, mainly due to their ability to show different phenotypic traits. In order to overcome the resistance to these antibiotics, the use of essential oils (EOs) is of great significance against highly pathogenic microorganisms. This study has been made to compare the in vitro antibacterial activity and further validated the same through the molecular docking study of 13 antibiotics such as ciprofloxacin, chloramphenicol, erythromycin, ampicillin, cefotaxime, rifampicin, kanamycin, vancomycin, streptomycin, penicillin, nalidixic acid, trimethoprim, and polymyxin, and 10 EOs such as garlic, tulsi, neem, clove, thyme, peppermint, coriander, tea, lavender, and eucalyptus against the target protein (DNA gyrase) of E...
April 16, 2024: Biotechnology and Applied Biochemistry
https://read.qxmd.com/read/38627798/efficacy-and-safety-of-antibiotics-for-treatment-of-leptospirosis-a-systematic-review-and-network-meta-analysis
#5
JOURNAL ARTICLE
Zhenhua Ji, Miaomiao Jian, Xuan Su, Yingyi Pan, Yi Duan, Weijie Ma, Lei Zhong, Jiaru Yang, Jieqin Song, Xinya Wu, Li Gao, Weijiang Ma, Jing Kong, Bingxue Li, Jinjing Chen, Meixiao Liu, Yuxin Fan, Li Peng, Yan Dong, Fukai Bao, Aihua Liu
BACKGROUND: Leptospirosis, an important zoonotic bacterial disease, commonly affects resource-poor populations and results in significant morbidity and mortality worldwide. The value of antibiotics in leptospirosis remains unclear, as evidenced by the conflicting opinions published. METHODS: We conducted a search in the PubMed, Web of Science, and Cochrane Library databases for studies. These studies included clinical trials and retrospective studies that evaluated the efficacy or safety of antibiotics for leptospirosis treatment...
April 16, 2024: Systematic Reviews
https://read.qxmd.com/read/38621154/changing-landscape-of-antimicrobial-resistance-in-neonatal-sepsis-an-in-silico-analyses-of-multidrug-resistance-in-klebsiella-pneumoniae
#6
JOURNAL ARTICLE
Santhiya Vijayakumar, Hithesh Kumar, Soumya Basu, Sara Chandy, Anand Anbarasu, Anand Manoharan, Sudha Ramaiah
BACKGROUND: Neonatal sepsis poses a critical healthcare concern, as multidrug-resistant Klebsiella pneumoniae (K. pneumoniae) infections are on the rise. Understanding the antimicrobial susceptibility patterns and underlying resistance mechanism is crucial for effective treatment. OBJECTIVES: This study aimed to comprehensively investigate the antimicrobial susceptibility patterns of K. pneumoniae strains responsible for neonatal sepsis using in silico tools. We sought to identify trends and explore reasons for varying resistance levels, particularly for β-lactams and fluoroquinolone...
April 12, 2024: Pediatric Infectious Disease Journal
https://read.qxmd.com/read/38616601/extended-spectrum-beta-lactamase-escherichia-coli-in-bagmati-river-kathmandu-valley
#7
JOURNAL ARTICLE
Bindu Ghimire, Muna Kumari Pokherel, Megha Raj Banjara, Komal Raj Rijal, Prakash Ghimire
BACKGROUND: Antimicrobial resistance organisms in the peripheral communities of an environment can be predicted by the presence of extended-spectrum beta-lactamase Escherichia coli in that environment. The close connectivity between humans and water sources can facilitate the entry of antimicrobial resistant organisms into the human ecosystem. The aim of this study was to assess beta lactamase producing Escherichia coli from Bagmati river within Kathmandu valley. METHODS: In the year 2020, a cross-sectional study was conducted on water samples collected from 66 locations along the Bagmati River...
March 31, 2024: Journal of Nepal Health Research Council
https://read.qxmd.com/read/38604960/-genetic-characterization-and-drug-resistance-analysis-of-salmonella-kentucky-st314-in-shenzhen-in-2010-2021
#8
JOURNAL ARTICLE
Chenxi Gao, Yiying She, Miaomiao Luo, Zhijiao Yue, Yixiang Jiang, Lulu Hu, Rui Cai, Min Jiang, Shuang Wu, Xiaolu Shi, Yinghui Li, Yaqun Qiu, Qinghua Hu
OBJECTIVE: To understand the prevalence, genetic characteristics and drug resistance features of Salmonella Kentucky ST314 in Shenzhen. METHODS: Whole genome sequencing of 14 strains of Salmonella Kentucky ST314 collected from 2010-2021 by the Foodborne Disease Surveillance Network of Shenzhen Center for Disease Control and Prevention for phylogenetic evolutionary analysis, drug resistance gene and plasmid detection; drug susceptibility experiments were performed by micro-broth dilution method...
March 2024: Wei Sheng Yan Jiu, Journal of Hygiene Research
https://read.qxmd.com/read/38603727/rapid-detection-and-molecular-epidemiology-of-%C3%AE-lactamase-producing-enterobacteriaceae-isolated-from-food-animals-and-in-contact-humans-in-nigeria
#9
JOURNAL ARTICLE
Solomon Olabiyi Olorunleke, Miranda Kirchner, Nicholas Duggett, Kim Stevens, Kennedy F Chah, John A Nwanta, Lucy A Brunton, Muna F Anjum
The emergence and spread of β-lactamase-producing Enterobacteriaceae poses a significant threat to public health, necessitating the rapid detection and investigation of the molecular epidemiology of these pathogens. We modified a multiplex real-time (RT)-PCR to concurrently detect β-lactamase genes (blaCTX-M, blaTEM, and blaSHV) and Enterobacteriaceae 16S ribosomal RNA. qPCR probes and primers were validated using control isolates, and the sensitivity and specificity assessed. The optimised multiplex qPCR was used to screen 220 non-clinical Enterobacteriaceae from food animals and in-contact humans in Southeast Nigeria selected on cefotaxime-supplemented agar plates...
2024: PloS One
https://read.qxmd.com/read/38595413/evaluation-to-determine-antibiotic-resistance-reduction-in-gram-negative-bacteria-from-2019-to-2021-by-the-saudi-arabia-national-plan
#10
JOURNAL ARTICLE
Jihad Awadallah Alrehaili
INTRODUCTION: The main objective of this study was to investigate the three-year evaluation of antibiotic resistance (AR) of multi-drug-resistant organisms and extended-spectrum beta-lactamase (ESBL)-resistant rate of gram-negative bacteria in one of the largest hospitals by the Saudi Arabia Nation Plan. METHODS: This study was conducted in the Department of Laboratory Medicine, in a private hospital in Riyadh City, Saudi Arabia, from January 2019 to December 2021 in 120-bed private hospitals...
February 2024: Journal of Pharmacy & Bioallied Sciences
https://read.qxmd.com/read/38592505/a-multidrug-resistant-extended-spectrum-beta-lactamase-esbl-producing-enterobacter-hormaechei-strain-from-mixed-sprouts
#11
JOURNAL ARTICLE
Elizabeth A Leighton, Chelsea N Gale, En Huang, Xu Yang, Erin L DiCaprio, Xinhui Li
Fresh vegetables can harbor antibiotic-resistant bacteria, including extended-spectrum β-lactamase (ESBL)-producing Enterobacterales. Enterobacter hormaechei is a bacterium belonging to the Enterobacterales order and the most commonly identified nosocomial pathogen of Enterobacter cloacae complex. The purpose of this study was to characterize a multi-drug resistant ESBL-producing E. hormaechei strain isolated from a sample of mixed sprouts. Vegetable samples were pre-enriched in buffered peptone water, followed by enrichment in Enterobacteria Enrichment Broth, and isolation on Chromagar™ ESBL plates...
April 9, 2024: Current Microbiology
https://read.qxmd.com/read/38588869/characterization-of-the-extended-substrate-spectrum-of-the-class-a-%C3%AE-lactamase-cess-1-from-stenotrophomonas-sp-and-structure-based-investigation-into-its-substrate-preference
#12
JOURNAL ARTICLE
Bo-Gyeong Jeong, Myeong-Yeon Kim, Chang-Sook Jeong, Hackwon Do, Jisub Hwang, Jun Hyuck Lee, Sun-Shin Cha
Stenotrophomonas spp. intrinsically resistant to many β-lactam antibiotics are found throughout the environment. CESS-1 identified in Stenotrophomonas sp. KCTC 12332 is an uncharacterized class A β-lactamase. Here, CESS-1 was revealed to display hydrolytic activities toward penicillins (penicillin G and ampicillin) and cephalosporins (cephalexin, cefaclor, and cefotaxime), while its activity toward carbapenems (imipenem and meropenem) was negligible. Although cefaclor, cephalexin, and ampicillin have similar structures with identical R1 side chains, the catalytic parameters of CESS-1 toward the three β-lactam antibiotics were distinct...
April 6, 2024: International Journal of Antimicrobial Agents
https://read.qxmd.com/read/38586783/acute-psychosis-presenting-with-dengue-fever-complicated-by-dengue-encephalitis
#13
Hassan Hussain, K V C Janaka, Harsha Gunasekara, Manojkumar Krishnan, Isuru Perera
Dengue is an infection with a wider spectrum of disease manifestations, ranging from simple dengue fever to expanded dengue syndrome. Expanded dengue syndrome encompasses multiorgan involvement, including neurological manifestations such as dengue encephalitis, seizures, encephalopathy, coma, hemiparesis, etc. Herein, we present a case of a 50-year-old female with a background history of well-controlled type 2 diabetes mellitus and hypertension for five years on oral medication. The patient presented with a one-day history of altered levels of consciousness, agitation, and aggressive behavior...
March 2024: Curēus
https://read.qxmd.com/read/38575313/minimum-inhibitory-concentrations-of-neisseria-gonorrhoeae-strains-in-clients-of-the-amsterdam-sexual-health-clinic-with-a-dutch-versus-an-international-sexual-network
#14
JOURNAL ARTICLE
Buhari Teker, Maarten Schim van der Loeff, Elske Hoornenborg, Anders Boyd, Sophia Reedijk, Alje van Dam, Vita Willemijn Jongen, Henry de Vries
OBJECTIVES: International travel combined with sex may contribute to dissemination of antimicrobial-resistant (AMR) Neisseria gonorrhoeae (Ng). To assess the role of travel in Ng strain susceptibility, we compared minimum inhibitory concentrations (MICs) for five antibiotics (ie, azithromycin, ceftriaxone, cefotaxime, cefixime and ciprofloxacin) in strains from clients with an exclusively Dutch sexual network and clients with an additional international sexual network. METHODS: From 2013 to 2019, we recorded recent residence of sexual partners of clients (and of their partners) with Ng at the Center for Sexual Health of Amsterdam...
April 4, 2024: Sexually Transmitted Infections
https://read.qxmd.com/read/38572968/comparison-of-methods-proposed-for-monitoring-cefotaxime-resistant-escherichia-coli-in-the-water-environment
#15
JOURNAL ARTICLE
Jeanette Calarco, Amy Pruden, Valerie J Harwood
Escherichia coli is a promising subject for globally coordinated surveillance of antimicrobial resistance (AMR) in water environments due to its clinical relevance and widespread use as an indicator of fecal contamination. Cefotaxime-resistant E. coli was recently evaluated favorably for this purpose by the World Health Organization TriCycle Protocol, which specifies tryptone bile x-glucuronide (TBX) medium and incubation at 35°C. We assessed comparability with the U.S. Environmental Protection Agency-approved method for E...
April 4, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38565980/bacterial-etiology-and-antimicrobial-resistance-pattern-of-pediatric-bloodstream-infections-a-5-year-experience-in-an-iranian-referral-hospital
#16
JOURNAL ARTICLE
Sadaf Sajedi Moghaddam, Setareh Mamishi, Babak Pourakbari, Shima Mahmoudi
BACKGROUND: Bloodstream infections (BSI) are the major cause of morbidity and mortality in children in developing countries. The purpose of the current study was to establish the antimicrobial susceptibility pattern of bacterial isolates from bloodstream infections at Children's Medical Center Hospital (CMC), Tehran, Iran. METHODS: We retrospectively recorded all positive blood cultures and antimicrobial susceptibility of all bloodstream isolates among children admitted to CMC, during 5 years...
April 3, 2024: BMC Infectious Diseases
https://read.qxmd.com/read/38562844/a-low-footprint-fluorescence-based-bacterial-time-kill-assay-for-estimating-dose-dependent-cell-death-dynamics
#17
Eshan S King, Anna E Stacy, Jacob G Scott
Dose-response curves that describe the relationship between antibiotic dose and growth rate in bacteria are commonly measured with optical density (OD) based assays. While being simple and high-throughput, any dose-dependent cell death dynamics are obscured, as OD assays in batch culture can only quantify a positive net change in cells. Time-kill experiments can be used to quantify cell death rates, but current techniques are extremely resource-intensive and may be biased by residual drug carried over into the quantification assay...
March 19, 2024: bioRxiv
https://read.qxmd.com/read/38561026/analysis-of-clinical-characteristics-of-infections-caused-by-shewanella-species
#18
JOURNAL ARTICLE
Yu Li, Rong-Qi, Hui Yang, Xiao-Lu Zhang, Yan Wu, Bao-Hua Huang, Qi Zhao, Yu-Feng Gu
PURPOSE: The Shewanella genus is a rare pathogen of marine origin. In recent years, there has been a continuous increase in infection cases caused by this bacterium, and we have observed the uniqueness of infections caused by this microorganism. MATERIALS AND METHODS: This study conducted a retrospective analysis of the medical history and laboratory examination data of patients infected with the Shewanella genus over the past decade. Additionally, it employed bioinformatics methods to analyze the relevant virulence factors and antibiotic resistance genes associated with the Shewanella genus...
March 30, 2024: Indian Journal of Medical Microbiology
https://read.qxmd.com/read/38559955/antiurease-activity-of-antibiotics-in-vitro-in-silico-structure-activity-relationship-and-md-simulations-of-cephalosporins-and-fluoroquinolones
#19
JOURNAL ARTICLE
Misbah Aslam, Jameel Rahman, Ambar Iqbal, Sara Mujtaba, Avinash Karkada Ashok, Farah Chafika Kaouche, Muhammad Munawar Hayat, Mouqadus-Un Nisa, Muhammad Ashraf
Helicobacter pylori infection is widespread in 50% of the world's population and is associated with gastric ulcers and related disorders that ultimately culminate in gastric cancer. Levofloxacin-based, or clarithromycin-based, triple therapy is frequently used to inhibit the bacterial urease enzyme for the eradication of H. pylori . A comprehensive investigation based on the urease inhibitory profiles of antibiotics and their computational implications is lacking in the scientific literature. The present study was aimed specifically to determine the antiurease activities within the realms of cephalosporins and fluoroquinolones by in vitro methods supported with in silico investigations...
March 26, 2024: ACS Omega
https://read.qxmd.com/read/38558854/a-multicenter-clinical-epidemiology-of-pediatric-pneumococcal-meningitis-in-china-results-from-the-chinese-pediatric-bacterial-meningitis-surveillance-cpbms-2019-2020
#20
JOURNAL ARTICLE
Caiyun Wang, Hongmei Xu, Gang Liu, Jing Liu, Hui Yu, Biquan Chen, Guo Zheng, Min Shu, Lijun Du, Zhiwei Xu, Lisu Huang, Haibo Li, Sainan Shu, Yinghu Chen
OBJECTIVE: To analyze the clinical epidemiological characteristics including clinical features, disease prognosis of pneumococcal meningitis (PM), and drug sensitivity of S. pneumoniae isolates in Chinese children. METHODS: A retrospective analysis was performed on the clinical, laboratory microbiological data of 160 hospitalized children less than 15 years of age with PM from January 2019 to December 2020 in 33 tertiary hospitals in China. RESULTS: A total of 160 PM patients were diagnosed, including 103 males and 57 females The onset age was 15 days to 15 years old, and the median age was 1 year and 3 months...
2024: Frontiers in Cellular and Infection Microbiology
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