keyword
https://read.qxmd.com/read/38640923/preliminary-mechanism-of-glial-maturation-factor-%C3%AE-on-pulmonary-vascular-remodeling-in-pulmonary-arterial-hypertension
#1
JOURNAL ARTICLE
Jie Li, Si Shi, Wenwen Yan, Yuqin Shen, Caiying Liu, Jinyuan Xu, Guotong Xu, Lixia Lu, Haoming Song
Recent evidence suggests that glia maturation factor β (GMFβ) is important in the pathogenesis of pulmonary arterial hpertension (PAH), but the underlying mechanism is unknown. To clarify whether GMFβ can be involved in pulmonary vascular remodeling and to explore the role of the IL-6-STAT3 pathway in this process, the expression of GMFβ in PAH rats is examined and the expression of downstream molecules including periostin (POSTN) and interleukin-6 (IL-6) is measured using real-time quantitative polymerase chain reaction (RT-qPCR) and western blot analysis...
April 19, 2024: Advanced biology
https://read.qxmd.com/read/38639267/increased-serpinb2-potentiates-15lo1-expression-via-stat6-signalling-in-epithelial-cells-in-eosinophilic-chronic-rhinosinusitis-with-nasal-polyps
#2
JOURNAL ARTICLE
Chunyu Luo, Ying Zhu, Shiyao Zhang, Jiayao Zhou, Song Mao, Ru Tang, Yuelong Gu, Shaolin Tan, Hai Lin, Zhipeng Li, Weitian Zhang
BACKGROUND: SERPINB2, a biomarker of Type-2 (T2) inflammatory processes, has been described in the context of asthma. Chronic rhinosinusitis with nasal polyps (CRSwNP) is also correlated with T2 inflammation and elevated 15LO1 induced by IL-4/13 in nasal epithelial cells. The aim of this study was to evaluate the expression and location of SERPINB2 in nasal epithelial cells (NECs) and determine whether SERPINB2 regulates 15LO1 and downstream T2 markers in NECs via STAT6 signalling. METHODS: SERPINB2 gene expression in bulk and single-cell RNAseq database was analysed by bioinformatics analysis...
April 19, 2024: Clinical and Experimental Allergy
https://read.qxmd.com/read/38639039/integrated-bioinformatics-analysis-reveals-upregulated-extracellular-matrix-hub-genes-in-pancreatic-cancer-implications-for-diagnosis-prognosis-immune-infiltration-and-therapeutic-strategies
#3
JOURNAL ARTICLE
Md Roman Mogal, Jasmin Akter Jame, Md Sohel, Md Mozibullah, Md Rashel Mahmod, Asadullah Junayed, Newton Kar, Lubatul Arbia, Abdullah Al Mamun, Md Asaduzzaman Sikder
BACKGROUND: Pancreatic cancer (PC) stands out as one of the most formidable malignancies and exhibits an exceptionally unfavorable clinical prognosis due to the absence of well-defined diagnostic indicators and its tendency to develop resistance to therapeutic interventions. The primary objective of this present study was to identify extracellular matrix (ECM)-related hub genes (HGs) and their corresponding molecular signatures, with the intent of potentially utilizing them as biomarkers for diagnostic, prognostic, and therapeutic applications...
April 2024: Cancer reports
https://read.qxmd.com/read/38631570/exploring-the-association-of-postn-cancer-associated-fibroblasts-with-triple-negative-breast-cancer
#4
JOURNAL ARTICLE
Shuangyan Lin, Miaoni Zhou, Liying Cheng, Zhifeng Shuai, Mingyuan Zhao, Ruixia Jie, Qun Wan, Fang Peng, Qiang Shu, Shiping Ding
Triple-negative breast cancer (TNBC) is a subtype of breast cancer with a poor prognosis. Cancer-associated fibroblasts (CAFs) play a critical role in regulating TNBC tumor development. This study aimed to identify and characterize a specific subtype of CAFs associated with TNBC. Initially, using high-throughput bulk transcriptomic data in two cohorts, we identified three CAF-related subtypes (CS1, CS2, CS3) in TNBC samples. These three CAFs subtypes were closely linked to the tumor microenvironment. The CS1 subtype exhibited a relatively immune-rich microenvironment and a favourable prognosis, whereas the CS3 subtype displayed an immune-deprived tumor microenvironment and an unfavourable prognosis...
April 15, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38601538/identification-of-a-novel-cancer-associated-fibroblasts-gene-signature-based-on-bioinformatics-analysis-to-predict-prognosis-and-therapeutic-responses-in-breast-cancer
#5
JOURNAL ARTICLE
Jin Song, Huifeng Liao, Huayan Li, Hongye Chen, Huiyan Si, Jiandong Wang, Xue Bai
Cancer-associated fibroblasts (CAFs) provide suitable conditions for growth of tumor cell and facilitate tumor progression. Hence, we aimed to identify a CAFs-related gene signature associated with the prognosis of patients with breast cancer (BRCA). We downloaded datasets from Gene Expression Omnibus (GEO) and confirmed the correlation between CAFs infiltration scores and prognosis. By performing weighted gene co-expression network analysis (WGCNA) and Lasso Cox regression analysis, we constructed a four-gene (COL5A3, FN1, POSTN, and RARRES2) prognostic CAFs signature model...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38580753/cdc167-exhibits-potential-as-a-biomarker-for-airway-inflammation-in-asthma
#6
JOURNAL ARTICLE
Yukai Zhong, Qiong Wu, Li Cai, Yuanjing Chen, Qi Shen
Current asthma treatments have been discovered to decrease the risk of disease progression. Herein, we aimed to characterize novel potential therapeutic targets for asthma. Differentially expressed genes (DEGs) for GSE64913 and GSE137268 datasets were characterized. Weighted correlation network analysis (WGCNA) was used to identify trait-related module genes within the GSE67472 dataset. The intersection of the module genes of interest, as well as the DEGs, comprised the key module genes that underwent additional candidate gene screening using machine learning...
April 5, 2024: Mammalian Genome: Official Journal of the International Mammalian Genome Society
https://read.qxmd.com/read/38577908/a-novel-exosome-related-prognostic-risk-model-for-thyroid-cancer
#7
JOURNAL ARTICLE
Junfeng Qi, Hanshan Cheng, Long Su, Jun Li, Fei Cheng
AIM: The aim was to build an exosome-related gene (ERG) risk model for thyroid cancer (TC) patients. METHODS: Note that, 510 TC samples from The Cancer Genome Atlas database and 121 ERGs from the ExoBCD database were obtained. Differential gene expression analysis was performed to get ERGs in TC (TERGs). Functional enrichment analyses including Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were conducted on the TERGs. Then we constructed a model based on LASSO Cox regression analysis...
April 5, 2024: Asia-Pacific Journal of Clinical Oncology
https://read.qxmd.com/read/38571583/identification-and-validation-of-mutual-hub-genes-in-idiopathic-pulmonary-fibrosis-and-rheumatoid-arthritis-associated-usual-interstitial-pneumonia
#8
JOURNAL ARTICLE
Liangyu Chen, Haobo Lin, Linmang Qin, Guangfeng Zhang, Donghui Huang, Peisheng Chen, Xiao Zhang
OBJECTIVES: The study aims at exploring common hub genes and pathways in idiopathic pulmonary fibrosis (IPF) and rheumatoid arthritis-associated usual interstitial pneumonia (RA-UIP) through integrated bioinformatics analyses. METHODS: The GSE199152 dataset containing lung tissue samples from IPF and RA-UIP patients was acquired from the Gene Expression Omnibus (GEO) database. The identification of overlapping differentially expressed genes (DEGs) in IPF and RA-UIP was carried out through R language...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38560204/-fat1-upregulation-is-correlated-with-an-immunosuppressive-tumor-microenvironment-and-predicts-unfavorable-outcome-of-immune-checkpoint-therapy-in-non-small-cell-lung-cancer
#9
JOURNAL ARTICLE
Chao Chen, Yanling Li, Haozhen Liu, Mengying Liao, Jianyi Yang, Jixian Liu
BACKGROUND: Previous studies found that FAT1 was recurrently mutated and aberrantly expressed in multiple cancers, and the loss function of FAT1 promoted the formation of cancer-initiating cells in several cancers. However, in some types of cancer, FAT1 upregulation could lead to epithelial-mesenchymal transition (EMT). The role of FAT1 in cancer progression, which appears to be cancer-type-specific, is largely unknown. METHODS: QRT-PCR and immunochemistry were used to verify the expression of FAT1 in non-small cell lung cancer (NSCLC)...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38553795/circ-postn-promotes-the-progression-and-reduces-radiosensitivity-in-esophageal-cancer-by-regulating-the-mir-876-5p-fyn-axis
#10
JOURNAL ARTICLE
Alan Chu, Chen Sun, Zongwen Liu, Shijia Liu, Mengxi Li, Rui Song, Lanlan Gan, Yongtai Wang, Ruitai Fan
BACKGROUND: Circular RNAs (circRNAs) play critical roles in the tumorigenesis and radiosensitivity of multiple cancers. Nevertheless, the biological functions of circRNA periostin (circ-POSTN) in esophageal cancer (EC) progression and radiosensitivity have not been well elucidated. METHODS: The expression of circ-POSTN, microRNA-876-5p (miR-876-5p), and proto-oncogene tyrosine-protein kinase (FYN) was analyzed by quantitative reverse transcription PCR (RT-qPCR)...
March 29, 2024: Thoracic Cancer
https://read.qxmd.com/read/38535843/characterization-of-the-pro-inflammatory-and-pruritogenic-transcriptome-in-skin-lesions-of-the-experimental-canine-atopic-acute-ige-mediated-late-phase-reactions-model-and-correlation-to-acute-skin-lesions-of-human-atopic-dermatitis
#11
JOURNAL ARTICLE
Amanda Blubaugh, Kathleen Hoover, Sujung Jun Kim, Jonathan E Fogle, Fatoumata B Sow, Frane Banovic
Intradermal injection of anti-immunoglobulin E (IgE) antibodies in dogs grossly and histologically resemble naturally occurring atopic dermatitis (AD). However, the activated inflammatory and pruritic pathways have not been characterized. The objectives of this study were to characterize the inflammatory transcriptome of experimental acute canine IgE-induced lesions and to determine how these correlate to the transcriptome of naturally occurring human and canine acute atopic dermatitis. Biopsies were collected at 6 and 24 h after intradermal injections of anticanine-IgE antibodies to eight healthy male castrated Beagles; healthy and saline-injected skin served as controls...
March 1, 2024: Veterinary Sciences
https://read.qxmd.com/read/38519500/single-cell-deciphering-of-progression-trajectories-of-the-tumor-ecosystem-in-head-and-neck-cancer
#12
JOURNAL ARTICLE
Z L Liu, X Y Meng, R J Bao, M Y Shen, J J Sun, W D Chen, F Liu, Y He
Head and neck squamous cell carcinoma is the sixth most common cancer worldwide and has high heterogeneity and unsatisfactory outcomes. To better characterize the tumor progression trajectory, we perform single-cell RNA sequencing of normal tissue, precancerous tissue, early-stage, advanced-stage cancer tissue, lymph node, and recurrent tumors tissue samples. We identify the transcriptional development trajectory of malignant epithelial cells and a tumorigenic epithelial subcluster regulated by TFDP1. Furthermore, we find that the infiltration of POSTN+ fibroblasts and SPP1+ macrophages gradually increases with tumor progression; their interaction or interaction with malignant cells also gradually increase to shape the desmoplastic microenvironment and reprogram malignant cells to promote tumor progression...
March 22, 2024: Nature Communications
https://read.qxmd.com/read/38515687/regulation-of-dihydroartemisinin-on-the-pathological-progression-of-laryngeal-carcinoma-through-the-periostin-yap-il-6-pathway
#13
JOURNAL ARTICLE
Xin-Yu Zhang, Rui-Cong Li, Cong Xu, Xiao-Ming Li
OBJECTIVE: Laryngeal cancer (LC) is one of the most common squamous cell carcinomas of the head and neck in clinical practice, and its incidence has been increasing in recent years, but the prognosis of the patients is not favorable. Hence, it is critical to re-understand and deeply study the causes and mechanisms of LC and explore new effective treatment methods and strategies. In this study, we analyzed the effect of Dihydroartemisinin (DHA) on the pathological progression of LC through the periostin (POSTN)/Yes-associated protein (YAP)/interleukin (IL)-6 pathway, which can provide new clinical references and guidelines...
March 30, 2024: Heliyon
https://read.qxmd.com/read/38505621/fibroblasts-facilitate-lymphatic-vessel-formation-in-transplanted-heart
#14
JOURNAL ARTICLE
Hui Gong, Ting Wang, Xiaotong Sun, Yuesheng Zhang, Yichao Qiu, Wenlong Sun, Yue Zhang, Peng Teng, Yanhua Hu, Xiaosheng Hu, Liang Ma, Qingbo Xu, Haige Zhao
Rationale: Lymphangiogenesis plays a critical role in the transplanted heart. The remodeling of lymphatics in the transplanted heart and the source of newly formed lymphatic vessels are still controversial, especially the mechanism of lymphangiogenesis remains limited. Methods: Heart transplantation was performed among BALB/c , C57BL/6J , Cag-Cre , Lyve1-CreERT2 ; Rosa26-tdTomato and Postn ( 2A-CreERT2 -wpre-pA ) 1 ; Rosa26-DTA mice. scRNA-seq, Elisa assay, Western blotting, Q-PCR and immunohistochemical staining were used to identify the cells and cell-cell communications of allograft heart...
2024: Theranostics
https://read.qxmd.com/read/38504252/soluble-periostin-is-a-potential-surveillance-biomarker-for-early-and-long-term-response-to-chemotherapy-in-advanced-breast-cancer
#15
JOURNAL ARTICLE
Li Jia, Wenwei Hu, Xu Yan, Jie Shao, Yuhong Guo, Aimin Zhang, Lianzi Yu, Yunli Zhou, Yueguo Li, Li Ren, Dong Dong
BACKGROUND: Noninvasive biomarkers for the assessment of response to chemotherapy in advanced breast cancer (BCa) are essential for optimized therapeutic decision-making. We evaluated the potential of soluble Periostin (POSTN) in circulation as a novel biomarker for chemotherapy efficacy monitoring. METHODS: Two hundred and thirty-one patients with different stages of BCa were included. Of those patients, 58 patients with inoperable metastatic disease receiving HER2-targeted or non-targeted chemotherapy were enrolled to assess the performances of markers in recapitulating the chemotherapy efficacy assessed by imaging...
March 19, 2024: Cancer Cell International
https://read.qxmd.com/read/38479598/refining-the-identity-of-mesenchymal-cell-types-associated-with-murine-periosteal-and-endosteal-bone
#16
JOURNAL ARTICLE
Intawat Nookaew, Jinhu Xiong, Melda Onal, Cecile Bustamante-Gomez, Visanu Wanchai, Qiang Fu, Ha-Neui Kim, Maria Almeida, Charles A O'Brien
Single-cell RNA sequencing has led to novel designations for mesenchymal cells associated with bone as well as multiple designations for what appear to be the same cell type. The main goals of this study were to increase the amount of single cell RNA sequence data for osteoblasts and osteocytes, to compare cells from the periosteum to those inside bone, and to clarify the major categories of cell types associated with murine bone. We created an atlas of murine bone-associated cells by harmonizing published datasets with in-house data from cells targeted by Osx1-Cre and Dmp1-Cre driver strains...
March 11, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38475964/identification-of-gravity-responsive-serum-proteins-in-spaceflight-mice-using-a-quantitative-proteomic-approach-with-data-independent-acquisition-mass-spectrometry
#17
JOURNAL ARTICLE
Yayoi Kimura, Yusuke Nakai, Yoko Ino, Tomoko Akiyama, Kayano Moriyama, Takashi Ohira, Tomoyuki Saito, Yutaka Inaba, Ken Kumagai, Akihide Ryo, Hisashi Hirano
Physical inactivity associated with gravity unloading, such as microgravity during spaceflight and hindlimb unloading (HU), can cause various physiological changes. In this study, we attempted to identify serum proteins whose levels fluctuated in response to gravity unloading. First, we quantitatively assessed changes in the serum proteome profiles of spaceflight mice using mass spectrometry with data-independent acquisition. The serum levels of several proteins involved in the responses to estrogen and glucocorticoid, blood vessel maturation, osteoblast differentiation, and ossification were changed by microgravity exposure...
March 12, 2024: Proteomics
https://read.qxmd.com/read/38474098/characterisation-and-expression-of-osteogenic-and-periodontal-markers-of-bone-marrow-mesenchymal-stem-cells-bm-mscs-from-diabetic-knee-joints
#18
JOURNAL ARTICLE
Nancy Hussein, Josephine Meade, Hemant Pandit, Elena Jones, Reem El-Gendy
Type 2 diabetes mellitus (T2DM) represents a significant health problem globally and is linked to a number of complications such as cardiovascular disease, bone fragility and periodontitis. Autologous bone marrow mesenchymal stem cells (BM-MSCs) are a promising therapeutic approach for bone and periodontal regeneration; however, the effect of T2DM on the expression of osteogenic and periodontal markers in BM-MSCs is not fully established. Furthermore, the effect of the presence of comorbidities such as diabetes and osteoarthritis on BM-MSCs is also yet to be investigated...
March 1, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38473788/simultaneous-expression-of-cd70-and-postn-in-cancer-associated-fibroblasts-predicts-worse-survival-of-colorectal-cancer-patients
#19
JOURNAL ARTICLE
Masayuki Komura, Chengbo Wang, Sunao Ito, Shunsuke Kato, Akane Ueki, Masahide Ebi, Naotaka Ogasawara, Toyonori Tsuzuki, Kenji Kasai, Kunio Kasugai, Shuji Takiguchi, Satoru Takahashi, Shingo Inaguma
Colorectal cancer (CRC) is one of the most common gastrointestinal cancers worldwide, with high morbidity and mortality rates. The evidence for the tumor-supporting capacities of cancer-associated fibroblasts (CAFs) that modulate cancer cell proliferation, invasion, metastasis, and tumor immunity, including in CRC, has been attracting attention. The present study examined the expression status of CD70 and POSTN in CRC and analyzed their association with clinicopathological features and clinical outcomes. In the present study, in total 15% (40/269) and 44% (119/269) of cases exhibited CD70 and POSTN expression on CAFs, respectively...
February 22, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38467692/single-cell-rna-sequencing-reveals-critical-modulators-of-extracellular-matrix-of-penile-cavernous-cells-in-erectile-dysfunction
#20
JOURNAL ARTICLE
Chao Luo, Yaqian Peng, Jiang Gu, Tao Li, Qiang Wang, Xiaolan Qi, Anyang Wei
Erectile dysfunction (ED) is a common and difficult to treat disease, and has a high incidence rate worldwide. As a marker of vascular disease, ED usually occurs in cardiovascular disease, 2-5 years prior to cardiovascular disease events. The extracellular matrix (ECM) network plays a crucial role in maintaining cardiac homeostasis, not only by providing structural support, but also by promoting force transmission, and by transducing key signals to intracardiac cells. However, the relationship between ECM and ED remains unclear...
March 11, 2024: Scientific Reports
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