keyword
https://read.qxmd.com/read/38529712/engineering-the-carbon-and-redox-metabolism-of-paenibacillus-polymyxa-for-efficient-isobutanol-production
#21
JOURNAL ARTICLE
Meliawati Meliawati, Daniel C Volke, Pablo I Nikel, Jochen Schmid
Paenibacillus polymyxa is a non-pathogenic, Gram-positive bacterium endowed with a rich and versatile metabolism. However interesting, this bacterium has been seldom used for bioproduction thus far. In this study, we engineered P. polymyxa for isobutanol production, a relevant bulk chemical and next-generation biofuel. A CRISPR-Cas9-based genome editing tool facilitated the chromosomal integration of a synthetic operon to establish isobutanol production. The 2,3-butanediol biosynthesis pathway, leading to the main fermentation product of P...
March 2024: Microbial Biotechnology
https://read.qxmd.com/read/38518554/inactivation-of-hydrogenase-3-leads-to-enhancement-of-1-3-propanediol-and-2-3-butanediol-production-by-klebsiella-pneumoniae
#22
JOURNAL ARTICLE
Weiyan Jiang, Yaoyu Cai, Shaoqi Sun, Wenqi Wang, Marina Tišma, Frank Baganz, Jian Hao
Klebsiella pneumoniae can use glucose or glycerol as carbon sources to produce 1,3-propanediol or 2,3-butanediol, respectively. In the metabolism of Klebsiella pneumoniae, hydrogenase-3 is responsible for H2 production from formic acid, but it is not directly related to the synthesis pathways for 1,3-propanediol and 2,3-butanediol. In the first part of this research, hycEFG, which encodes subunits of the enzyme hydrogenase-3, was knocked out, so K. pneumoniae ΔhycEFG lost the ability to produce H2 during cultivation using glycerol as a carbon source...
March 19, 2024: Enzyme and Microbial Technology
https://read.qxmd.com/read/38508581/pediatric-consent-on-fhir
#23
JOURNAL ARTICLE
Anton Voronov, Mohammad Jafari, Lin Zhao, Qixuan Hong, John Pope, Darwyn Chern, Megan Lipman, Melissa Soliz, Adela Grando
BACKGROUND: Standardizing and formalizing consent processes and forms can prevent ambiguities, convey a more precise meaning, and support machine interpretation of consent terms. OBJECTIVES: Our goal was to introduce a systematic approach to standardize and digitize pediatric consent forms, which are complex due to legal requirements for child and legal guardian involvement. METHODS: First, we reviewed the consent requirements from the Arizona Department of Health Services (ADHS) and we used 21 Arizona pediatric treatment consents from five healthcare organizations to propose and evaluate an implementation-agnostic Consent for Treatment Framework...
March 20, 2024: Applied Clinical Informatics
https://read.qxmd.com/read/38501647/engineering-diaryl-alcohol-dehydrogenase-kpadh-reveals-importance-of-retaining-hydration-shell-in-organic-solvent-tolerance
#24
JOURNAL ARTICLE
Lu Zhang, Wei Dai, Shuo Rong, Ulrich Schwaneberg, Guochao Xu, Ye Ni
Alcohol dehydrogenases (ADHs) are synthetically important biocatalysts for the asymmetric synthesis of chiral alcohols. The catalytic performance of ADHs in the presence of organic solvents is often important since most prochiral ketones are highly hydrophobic. Here, the organic solvent tolerance of KpADH from Kluyveromyces polyspora was semi-rationally evolved. Using tolerant variants obtained, meticulous experiments and computational studies were conducted to explore properties including stability, activity and kinetics in the presence of various organic solvents...
April 2024: Protein Science
https://read.qxmd.com/read/38493749/masld-is-related-to-impaired-alcohol-dehydrogenase-adh-activity-and-elevated-blood-ethanol-levels-role-of-tnf%C3%AE-and-jnk
#25
JOURNAL ARTICLE
Katharina Burger, Finn Jung, Katharina Staufer, Ruth Ladurner, Michael Trauner, Anja Baumann, Annette Brandt, Ina Bergheim
Elevated fasting ethanol levels in peripheral blood frequently found in metabolic dysfunction-associated steatohepatitis (MASLD) patients even in the absence of alcohol consumption are discussed to contribute to disease development. To test the hypothesis that besides an enhanced gastrointestinal synthesis a diminished alcohol elimination through alcohol dehydrogenase (ADH) may also be critical herein, we determined fasting ethanol levels and ADH activity in livers and blood of MASLD patients and in wild-type ± anti-TNFα antibody (infliximab) treated and TNFα-/- mice fed a MASLD-inducing diet...
March 12, 2024: Redox Biology
https://read.qxmd.com/read/38477406/injectable-hydrogel-delivery-system-with-high-drug-loading-for-prolonging-local-anesthesia
#26
JOURNAL ARTICLE
Yongchun Li, You Chen, Yifan Xue, Jinlong Jin, Yixin Xu, Weian Zeng, Jie Liu, Jingdun Xie
Peripheral nerve block is performed for precise pain control and lesser side effects after surgery by reducing opioid consumption. Injectable hydrogel delivery systems with high biosafety and moisture content have good clinical application prospects for local anesthetic delivery. However, how to achieve high drug loading and long-term controlled release of water-soluble narcotic drugs remains a big challenge. In this study, heterogeneous microspheres and an injectable gel-matrix composite drug delivery system are designed in two steps...
March 13, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38471606/a-dual-network-cross-linked-hydrogel-with-multifunctional-bletilla-striata-polysaccharide-gelatin-tea-polyphenol-for-wound-healing-promotion
#27
JOURNAL ARTICLE
Hongyu Ma, Yongbu Axi, Yuanhui Lu, Chunguang Dai, Shengting Huang, Zilin Kong, Rezhemu Jimo, Heran Li, Gongzheng Chen, Ping Li, Liang Zhang, Yan Qu, Xuhua Qin, Rui Zeng, Kaijun Gou
Wound healing is a dynamic and complex biological process, and traditional biological excipients cannot meet the needs of the wound healing process, and there is an urgent need for a biological dressing with multifunctionality and the ability to participate in all stages of wound healing. This study developed tea polyphenol (TP)-incorporated multifunctional hydrogel based on oxidized Bletilla striata polysaccharide (OBSP) and adipic acid dihydrazide modified gelatin (Gel-ADH) with antimicrobial, antioxidant hemostatic, and anti-inflammatory properties to promote wound healing...
March 10, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38464225/rare-and-common-variants-associated-with-alcohol-consumption-identify-a-conserved-molecular-network
#28
Brittany S Leger, John J Meredith, Trey Ideker, Sandra Sanchez-Roige, Abraham A Palmer
Genome-wide association studies (GWAS) have identified hundreds of common variants associated with alcohol consumption. In contrast, rare variants have only begun to be studied for their role in alcohol consumption. No studies have examined whether common and rare variants implicate the same genes and molecular networks. To address this knowledge gap, we used publicly available alcohol consumption GWAS summary statistics (GSCAN, N=666,978) and whole exome sequencing data (Genebass, N=393,099) to identify a set of common and rare variants for alcohol consumption...
March 1, 2024: bioRxiv
https://read.qxmd.com/read/38457135/transcriptome-study-of-bursaphelenchus-xylophilus-treated-with-fomepizole-reveals-a-serine-threonine-protein-phosphatase-gene-that-is-substantially-linked-with-vitality-and-pathogenicity
#29
JOURNAL ARTICLE
Linsong Wang, Chenglei Qin, Qunqun Guo, Yi Han, Guicai Du, Ronggui Li
Bursaphelenchus xylophilus , the pine wood nematode (PWN), is the causal agent of pine wilt disease (PWD), which causes enormous economic loss annually. According to our previous research, fomepizole, as a selective inhibitor of PWN alcohol dehydrogenase (ADH), has the potential to be a preferable lead compound for developing novel nematicides. However, the underlying molecular mechanism is still unclear. The result of molecular docking showed that the stronger interactions between fomepizole and PWN ADH at the active site of ADH were attributed to hydrogen bonds...
March 8, 2024: Phytopathology
https://read.qxmd.com/read/38450489/identification-of-a-novel-peptide-with-alcohol-dehydrogenase-activating-ability-from-ethanol-induced-lactococcus-lactis-a-combined-in-silico-prediction-and-in-vivo-validation
#30
JOURNAL ARTICLE
Sisi Chen, Juanjuan Yi, Qiaozhen Kang, Mo Song, David Raubenheimer, Jike Lu
Alcohol dehydrogenase (ADH) is a crucial rate-limiting enzyme in alcohol metabolism. Our previous research found that ethanol-induced intracellular extracts of Lactococcus lactis ( L. lactis ) could enhance alcohol metabolism in mice, but the responsible compounds remain unidentified. The study aimed to screen potential ADH-activating peptides from ethanol-induced L. lactis using virtual screening and molecular docking calculation. Among them, the pentapeptide FAPEG might bind to ADH through hydrophobic interaction and hydrogen bonds, then enhancing ADH activity...
March 7, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38449536/peroxygenase-catalyzed-allylic-oxidation-unlocks-telescoped-synthesis-of-1-s-3-r-3-hydroxycyclohexanecarbonitrile
#31
JOURNAL ARTICLE
Christian M Heckmann, Moritz Bürgler, Caroline E Paul
The unmatched chemo-, regio-, and stereoselectivity of enzymes renders them powerful catalysts in the synthesis of chiral active pharmaceutical ingredients (APIs). Inspired by the discovery route toward the LPA1 -antagonist BMS-986278, access to the API building block (1 S ,3 R )-3-hydroxycyclohexanecarbonitrile was envisaged using an ene reductase (ER) and alcohol dehydrogenase (ADH) to set both stereocenters. Starting from the commercially available cyclohexene-1-nitrile, a C-H oxyfunctionalization step was required to introduce the ketone functional group, yet several chemical allylic oxidation strategies proved unsuccessful...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38445345/-not-available
#32
JOURNAL ARTICLE
Nicolai Lassen Frid, Rose Bryde Laursen, Johannes Zeyda, Mikael Aagaard
No abstract text is available yet for this article.
March 4, 2024: Ugeskrift for Laeger
https://read.qxmd.com/read/38437466/molecular-and-metabolic-characterization-of-petroleum-hydrocarbons-degrading-bacillus-cereus
#33
JOURNAL ARTICLE
Nadia Hussain, Fatima Muccee, Muhammad Hammad, Farhan Mohiuddin, Saboor Muarij Bunny, Aansa Shahab
Hydrocarbon constituents of petroleum are persistent, bioaccumulated, and bio-magnified in living tissues, transported to longer distances, and exert hazardous effects on human health and the ecosystem. Bioaugmentation with microorganisms like bacteria is an emerging approach that can mitigate the toxins from environmental sources. The present study was initiated to target the petroleum-contaminated soil of gasoline stations situated in Lahore. Petroleum degrading bacteria were isolated by serial dilution method followed by growth analysis, biochemical and molecular characterization, removal efficiency estimation, metabolites extraction, and GC-MS of the metabolites...
March 1, 2024: Polish Journal of Microbiology
https://read.qxmd.com/read/38433980/a-multistep-semi-continuous-biocatalytic-setup-for-the-production-of-polycaprolactone
#34
JOURNAL ARTICLE
Alessia Valotta, Daniela Stelzer, Tamara Reiter, Wolfgang Kroutil, Heidrun Gruber-Woelfler
Biocatalysis has gained increasing importance as an eco-friendly alternative for the production of bulk and fine chemicals. Within this paradigm, Baeyer Villiger monoxygenases (BVMOs) serve as enzymatic catalysts that provide a safe and sustainable route to the conventional synthesis of lactones, such as caprolactone, which is employed for the production of polycaprolactone (PCL), a biocompatible polymer for medicinal applications. In this work, we present a three-step, semi-continuous production of PCL using an entirely biocatalytic process, highlighting the merits of continuous manufacturing for enhancing biocatalysis...
February 29, 2024: Reaction Chemistry & Engineering
https://read.qxmd.com/read/38432266/a%C3%AE-binding-with-alcohol-dehydrogenase-drives-alzheimer-s-disease-pathogenesis-a-review
#35
REVIEW
Zuting Ye, Yanming Liu, Xingjiang Jin, Yiqing Wu, Hang Zhao, Tingting Gao, Qiangfeng Deng, Jianhua Cheng, Jing Lin, Zhiqian Tong
Although Alzheimer's disease (AD) characterized with senile plaques and neurofibrillary tangles has been found for over 100 years, its molecular mechanisms are ambiguous. More worsely, the developed medicines targeting amyloid-beta (Aβ) and/or tau hyperphosphorylation did not approach the clinical expectations in patients with moderate or severe AD until now. This review unveils the role of a vicious cycle between Aβ-derived formaldehyde (FA) and FA-induced Aβ aggregation in the onset course of AD...
March 1, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38424558/enhanced-bacterial-cellulose-production-in-komagataeibacter-sucrofermentans-impact-of-different-pqq-dependent-dehydrogenase-knockouts-and-ethanol-supplementation
#36
JOURNAL ARTICLE
Pedro Montenegro-Silva, Tom Ellis, Fernando Dourado, Miguel Gama, Lucília Domingues
BACKGROUND: Bacterial cellulose (BC) is a biocompatible material with unique mechanical properties, thus holding a significant industrial potential. Despite many acetic acid bacteria (AAB) being BC overproducers, cost-effective production remains a challenge. The role of pyrroloquinoline quinone (PQQ)-dependent membrane dehydrogenases (mDH) is crucial in the metabolism of AAB since it links substrate incomplete oxidation in the periplasm to energy generation. Specifically, glucose oxidation to gluconic acid substantially lowers environmental pH and hinders BC production...
February 29, 2024: Biotechnol Biofuels Bioprod
https://read.qxmd.com/read/38416903/active-surveillance-for-atypical-ductal-hyperplasia-and-ductal-carcinoma-in-situ
#37
JOURNAL ARTICLE
Rachel Miceli, Cecilia L Mercado, Osvaldo Hernandez, Chloe Chhor
Atypical ductal hyperplasia (ADH) and ductal carcinoma in situ (DCIS) are relatively common breast lesions on the same spectrum of disease. Atypical ductal hyperblasia is a nonmalignant, high-risk lesion, and DCIS is a noninvasive malignancy. While a benefit of screening mammography is early cancer detection, it also leads to increased biopsy diagnosis of noninvasive lesions. Previously, treatment guidelines for both entities included surgical excision because of the risk of upgrade to invasive cancer after surgery and risk of progression to invasive cancer for DCIS...
July 28, 2023: Journal of breast imaging
https://read.qxmd.com/read/38414163/management-and-risk-of-upgrade-of-atypical-ductal-hyperplasia-in-the-breast-a-population-based-retrospective-cohort-study
#38
JOURNAL ARTICLE
Charlotta Wadsten, Gunilla Rask
BACKGROUND: International guidelines recommend open surgery for atypical ductal hyperplasia (ADH) in the breast due to risk of underestimating malignant disease. Considering the ongoing randomized trials of active surveillance of low-risk ductal carcinoma in situ (DCIS), it seems reasonable to define a low-risk group of women with ADH where a conservative approach is appropriate. The aim here was to evaluate the management and risk for upgrade of lesions diagnosed as ADH in percutaneous breast biopsies in two Swedish hospitals...
February 27, 2024: Scandinavian Journal of Surgery: SJS
https://read.qxmd.com/read/38403888/the-risk-of-antidepressant-induced-hyponatremia-a-meta-analysis-of-antidepressant-classes-and-compounds
#39
REVIEW
T Gheysens, F Van Den Eede, L De Picker
No abstract text is available yet for this article.
February 26, 2024: European Psychiatry: the Journal of the Association of European Psychiatrists
https://read.qxmd.com/read/38403458/intermediate-product-control-in-cascade-reaction-for-one-pot-production-of-%C3%AE%C2%B5-caprolactone-by-escherichia-coli
#40
JOURNAL ARTICLE
Hefeng Chen, Ran Liu, Shengliang Cai, Yingjiao Zhang, Chaoyi Zhu, Hao Yu, Shuang Li
ε-Caprolactone is an important non-toxic compound for polymer synthesis like polycaprolactone which has been widely used in drug delivery and degradable plastics. To meet the demand for a green economy, a bi-enzymatic cascade, consisting of an alcohol dehydrogenase (ADH) and a cyclohexanone monooxygenase (CHMO), was designed and introduced into Escherichia coli to synthesize ε-caprolactone from cyclohexanol with a self-sufficient NADPH-cofactor regeneration system. To further improve the catalytic efficiency, a carbonyl group-dependent colorimetric method using inexpensive 2,4-dinitrophenylhydrazine (DNPH) was developed for assay of cyclohexanone, an intermediate production of cascade reaction...
February 2024: Biotechnology Journal
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