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Histogram analysis texture analysis

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https://read.qxmd.com/read/30717792/the-utility-of-mri-histogram-and-texture-analysis-for-the-prediction-of-histological-diagnosis-in-head-and-neck-malignancies
#1
Noriyuki Fujima, Akihiro Homma, Taisuke Harada, Yukie Shimizu, Khin Khin Tha, Satoshi Kano, Takatsugu Mizumachi, Ruijiang Li, Kohsuke Kudo, Hiroki Shirato
BACKGROUND: To assess the utility of histogram and texture analysis of magnetic resonance (MR) fat-suppressed T2-weighted imaging (Fs-T2WI) for the prediction of histological diagnosis of head and neck squamous cell carcinoma (SCC) and malignant lymphoma (ML). METHODS: The cases of 57 patients with SCC (45 well/moderately and 12 poorly differentiated SCC) and 10 patients with ML were retrospectively analyzed. Quantitative parameters with histogram features (relative mean signal, coefficient of variation, kurtosis and skewness) and gray-level co-occurrence matrix (GLCM) features (contrast, correlation, energy and homogeneity) were calculated using Fs-T2WI data with a manual tumor region of interest (ROI)...
February 4, 2019: Cancer Imaging: the Official Publication of the International Cancer Imaging Society
https://read.qxmd.com/read/30684880/integration-of-spectral-and-textural-features-of-visible-and-near-infrared-hyperspectral-imaging-for-differentiating-between-normal-and-white-striping-broiler-breast-meat
#2
Hongzhe Jiang, Seung-Chul Yoon, Hong Zhuang, Wei Wang, Yufeng Li, Yi Yang
White striping (WS), an emerging muscle myopathy in poultry industry, is gaining increasing attention globally. In this study, visible and near-infrared hyperspectral imaging (HSI, 400-1000 nm) was investigated for developing an optical sensing technique to differentiate WS broiler breast fillets (pectoralis major) from normal fillets. The minimum noise fraction (MNF), followed by an inverse MNF (IMNF), was conducted to improve the signal-to-noise ratio of hyperspectral images during the pre-processing process...
January 17, 2019: Spectrochimica Acta. Part A, Molecular and Biomolecular Spectroscopy
https://read.qxmd.com/read/30673883/predictive-markers-for-mgmt-promoter-methylation-in-glioblastomas
#3
Tokunori Kanazawa, Yasuhiro Minami, Masahiro Jinzaki, Masahiro Toda, Kazunari Yoshida, Hikaru Sasaki
The promoter methylation status of the O6 -methylguanine-DNA methyltransferase (MGMT) gene has been described as the most important predictor of chemotherapeutic response and patients' survival in glioblastomas (GBs). Therefore, prediction of the MGMT promoter methylation status by imaging would help to preoperatively decide the overall treatment strategy as well as surgical strategy. This study aimed to detect imaging parameters to predict MGMT promoter methylation in GBs by using a commercially available software...
January 23, 2019: Neurosurgical Review
https://read.qxmd.com/read/30645669/metastatic-melanoma-pretreatment-contrast-enhanced-ct-texture-parameters-as-predictive-biomarkers-of-survival-in-patients-treated-with-pembrolizumab
#4
Carole Durot, Sébastien Mulé, Philippe Soyer, Aude Marchal, Florent Grange, Christine Hoeffel
PURPOSE: To determine whether texture analysis features on pretreatment contrast-enhanced computed tomography (CT) images can predict overall survival (OS) and progression-free survival (PFS) in patients with metastatic malignant melanoma (MM) treated with an anti-PD-1 monoclonal antibody, pembrolizumab. MATERIALS AND METHODS: This institutional-approved retrospective study included 31 patients with metastatic MM treated with pembrolizumab. Texture analysis of 74 metastatic lesions was performed on CT scanners obtained within 1 month before treatment...
January 15, 2019: European Radiology
https://read.qxmd.com/read/30617484/texture-analysis-on-conventional-mri-images-accurately-predicts-early-malignant-transformation-of-low-grade-gliomas
#5
Shun Zhang, Gloria Chia-Yi Chiang, Rajiv S Magge, Howard Alan Fine, Rohan Ramakrishna, Eileen Wang Chang, Tejas Pulisetty, Yi Wang, Wenzhen Zhu, Ilhami Kovanlikaya
OBJECTIVES: Texture analysis performed on MRI images can provide additional quantitative information that is invisible to human assessment. This study aimed to evaluate the feasibility of texture analysis on preoperative conventional MRI images in predicting early malignant transformation from low- to high-grade glioma and compare its utility to histogram analysis alone. METHODS: A total of 68 patients with low-grade glioma (LGG) were included in this study, 15 of which showed malignant transformation...
January 7, 2019: European Radiology
https://read.qxmd.com/read/30599864/repeatability-of-diffusion-weighted-mri-of-the-prostate-using-whole-lesion-adc-values-skew-and-histogram-analysis
#6
Tristan Barrett, Edward M Lawrence, Andrew N Priest, Anne Y Warren, Vincent J Gnanapragasam, Ferdia A Gallagher, Evis Sala
PURPOSE: To investigate the repeatability of diffusion-weighted imaging parameter including ADC-derived histogram values in prostate cancer. METHODS: 10 patients with prostate cancer were prospectively recruited to a retest cohort. 3 T diffusion-weighted MRI of the prostate was acquired consecutively with patient getting off the scanner between studies. Prostatectomy-histopathology defined tumour regions-of-interest were outlined on ADC maps and diffusion-weighted metrics including histograms were calculated...
January 2019: European Journal of Radiology
https://read.qxmd.com/read/30569552/t-2-based-mri-delta-radiomics-improve-response-prediction-in-soft-tissue-sarcomas-treated-by-neoadjuvant-chemotherapy
#7
Amandine Crombé, Cynthia Périer, Michèle Kind, Baudouin Denis De Senneville, François Le Loarer, Antoine Italiano, Xavier Buy, Olivier Saut
BACKGROUND: Standard of care for patients with high-grade soft-tissue sarcoma (STS) are being redefined since neoadjuvant chemotherapy (NAC) has demonstrated a positive effect on patients' outcome. Yet response evaluation in clinical trials still relies on RECIST criteria. PURPOSE: To investigate the added value of a Delta-radiomics approach for early response prediction in patients with STS undergoing NAC. STUDY TYPE: Retrospective. POPULATION: Sixty-five adult patients with newly-diagnosed, locally-advanced, histologically proven high-grade STS of trunk and extremities...
December 19, 2018: Journal of Magnetic Resonance Imaging: JMRI
https://read.qxmd.com/read/30544300/pretreatment-texture-analysis-of-routine-mr-images-and-shape-analysis-of-the-diffusion-tensor-for-prediction-of-volumetric-response-after-radiosurgery-for-meningioma
#8
(no author information available yet)
OBJECTIVEThe goal of this study was to identify parameters from routine T1- and T2-weighted MR sequences and diffusion tensor imaging (DTI) that best predict the volumetric changes in a meningioma after treatment with Gamma Knife radiosurgery (GKRS).METHODSIn 32 patients with meningioma, routine MRI and DTI data were measured before GKRS. A total of 78 parameters derived from first-level texture analysis of the pretreatment MR images, including calculation of the mean, SD, 2.5th and 97.5th percentiles, and kurtosis and skewness of data in histograms on a voxel-wise basis, were correlated with lesion volume change after a mean follow-up period of 3 years (range 19...
December 1, 2018: Journal of Neurosurgery
https://read.qxmd.com/read/30527518/texture-analysis-of-cardiovascular-magnetic-resonance-cine-images-differentiates-aetiologies-of-left-ventricular-hypertrophy
#9
R Schofield, B Ganeshan, M Fontana, A Nasis, S Castelletti, S Rosmini, T A Treibel, C Manisty, R Endozo, A Groves, J C Moon
AIM: To investigate whether unenhanced cardiovascular magnetic resonance (CMR) balanced steady state free precession (bSSFP) cine images could be analysed using textural analysis (TA) software to differentiate different aetiologies of disease causing increased myocardial wall thickness (left ventricular hypertrophy [LVH]) and indicate the severity of myocardial tissue abnormality. MATERIALS AND METHODS: A mid short axis unenhanced cine frame of 216 patients comprising 50 cases of hypertrophic cardiomyopathy (HCM; predominantly Left ventricular outflow tract obstruction [LVOTO] subtype), 52 cases of cardiac amyloid (CA; predominantly AL: light chain subtype), 68 cases of aortic stenosis (AS), 15 hypertensive patients with LVH (HTN+LVH), and 31 healthy volunteers (HV) underwent TA of the CMR cine images (CMRTA) using TexRAD (TexRAD Ltd, Cambridge, UK)...
October 24, 2018: Clinical Radiology
https://read.qxmd.com/read/30511528/-diffusion-weighted-imaging-texture-features-in-differentiation-of-malignant-from-benign-nonpalpable-breast-lesions-for-patients-with-microcalcifications-only-in-mammography
#10
Shujun Chen, Guoliang Shao, Feng Shao, Minming Zhang
OBJECTIVE: To evaluate the application of MR diffusion-weighted imaging(DWI) texture features in differentiation of malignant from benign nonpalpable breast lesion for patients with microcalcifications-only in mammography. METHODS: The clinical and MR-DWI data of 61 patients with microcalcifications, who underwent three-dimensional positioning of breast X-ray wire from October 2012 to December 2015 in Zhejiang Cancer Hospital, were retrospectively analyzed, including 38 patients with malignant lesions and 23 patients with benign lesions...
February 25, 2018: Zhejiang da Xue Xue Bao. Yi Xue Ban, Journal of Zhejiang University. Medical Sciences
https://read.qxmd.com/read/30506142/juxtatumoral-perinephric-fat-analysis-in-clear-cell-renal-cell-carcinoma
#11
Tania S Gill, Bino A Varghese, Darryl H Hwang, Steven Y Cen, Manju Aron, Monish Aron, Vinay A Duddalwar
PURPOSE: The purpose of the study was to evaluate the feasibility of using contrast-enhanced computed tomography (CECT)-based texture analysis (CTTA) metrics to differentiate between juxtatumoral perinephric fat (JPF) surrounding low-grade (ISUP 1-2) versus high-grade (ISUP 3-4) clear cell renal cell carcinoma (ccRCC). METHODS: In this IRB-approved study, we retrospectively queried the surgical database between June 2009 and April 2016 and identified 83 patients with pathologically confirmed ccRCC (low grade: n = 54, mean age = 61...
November 30, 2018: Abdominal Radiology
https://read.qxmd.com/read/30478670/impact-of-androgen-deprivation-therapy-on-apparent-diffusion-coefficient-and-t2w-mri-for-histogram-and-texture-analysis-with-respect-to-focal-radiotherapy-of-prostate-cancer
#12
M Daniel, P Kuess, P Andrzejewski, T Nyholm, T Helbich, S Polanec, F Dragschitz, G Goldner, D Georg, P Baltzer
PURPOSE: Accurate prostate cancer (PCa) detection is essential for planning focal external beam radiotherapy (EBRT). While biparametric MRI (bpMRI) including T2-weighted (T2w) and diffusion-weighted images (DWI) is an accurate tool to localize PCa, its value is less clear in the case of additional androgen deprivation therapy (ADT). The aim of this study was to investigate the value of a textural feature (TF) approach on bpMRI analysis in prostate cancer patients with and without neoadjuvant ADT with respect to future dose-painting applications...
November 26, 2018: Strahlentherapie und Onkologie: Organ der Deutschen Röntgengesellschaft ... [et Al]
https://read.qxmd.com/read/30465868/mri-based-texture-analysis-to-classify-low-grade-gliomas-into-astrocytoma-and-1p-19q-codeleted-oligodendroglioma
#13
Shun Zhang, Gloria Chia-Yi Chiang, Rajiv S Magge, Howard Alan Fine, Rohan Ramakrishna, Eileen Wang Chang, Tejas Pulisetty, Yi Wang, Wenzhen Zhu, Ilhami Kovanlikaya
PURPOSE: Texture analysis performed on MR images can detect quantitative features that are imperceptible to human visual assessment. The purpose of this study was to evaluate the feasibility of texture analysis on preoperative conventional MRI to discriminate between histological subtypes in low-grade gliomas (LGGs), and to determine the utility of texture analysis compared to histogram analysis alone. METHODS: A total of 41 patients with LGG, 21 astrocytoma and 20 1p/19q codeleted oligodendroglioma were included in this study...
November 19, 2018: Magnetic Resonance Imaging
https://read.qxmd.com/read/30456584/ct-reconstruction-algorithms-affect-histogram-and-texture-analysis-evidence-for-liver-parenchyma-focal-solid-liver-lesions-and-renal-cysts
#14
Su Joa Ahn, Jung Hoon Kim, Sang Min Lee, Sang Joon Park, Joon Koo Han
PURPOSE: To determine the effects of different reconstruction algorithms on histogram and texture features in different targets. MATERIALS AND METHODS: Among 3620 patients, 480 had normal liver parenchyma, 494 had focal solid liver lesions (metastases = 259; hepatocellular carcinoma = 99; hemangioma = 78; abscess = 32; and cholangiocarcinoma = 26), and 488 had renal cysts. CT images were reconstructed with filtered back-projection (FBP), hybrid iterative reconstruction (HIR), and iterative model reconstruction (IMR) algorithms...
November 19, 2018: European Radiology
https://read.qxmd.com/read/30430686/a-triple-classification-radiomics-model-for-the-differentiation-of-primary-chordoma-giant-cell-tumor-and-metastatic-tumor-of-sacrum-based-on-t2-weighted-and-contrast-enhanced-t1-weighted-mri
#15
Ping Yin, Ning Mao, Chao Zhao, Jiangfen Wu, Lei Chen, Nan Hong
BACKGROUND: Preoperative differentiation between primary sacral chordoma (SC), sacral giant cell tumor (SGCT), and sacral metastatic tumor (SMT) is important for treatment decisions. PURPOSE: To develop and validate a triple-classification radiomics model for the preoperative differentiation of SC, SGCT, and SMT based on T2-weighted fat saturation (T2w FS) and contrast-enhanced T1-weighted (CE T1w) MRI. STUDY TYPE: Retrospective. POPULATION: A total of 120 pathologically confirmed sacral patients (54 SCs, 30 SGCTs, and 36 SMTs) were retrospectively analyzed and divided into a training set (n = 83) and a validation set (n = 37)...
November 14, 2018: Journal of Magnetic Resonance Imaging: JMRI
https://read.qxmd.com/read/30419049/novel-chromaticity-similarity-based-color-texture-descriptor-for-digital-pathology-image-analysis
#16
Xingyu Li, Konstantinos N Plataniotis
Pathology images are color in nature due to the use of chemical staining in biopsy examination. Aware of the high color diagnosticity in pathology images, this work introduces a compact rotation-invariant texture descriptor, named quantized diagnostic counter-color pattern (QDCP), for digital pathology image understanding. On the basis of color similarity quantified by the inner product of unit-length color vectors, local counter-color textons are indexed first. Then the underlined distribution of QDCP indexes is estimated by an image-wise histogram...
2018: PloS One
https://read.qxmd.com/read/30418674/texture-analysis-for-automated-evaluation-of-jaszczak-phantom-spect-system-tests
#17
Kenneth J Nichols, Frank P DiFilippo, Christopher J Palestro
PURPOSE: Routine quarterly quality assurance (QA) assessment of single photon emission computed tomography (SPECT) systems includes analysis of multipurpose phantoms containing spheres and rods of various sizes. When evaluated by accreditation agencies, criteria applied to assess image quality are largely subjective. Determining a quantified image characteristic metric that emulates human reader impressions of image quality could be quite useful. Our investigation was conducted to ascertain whether image texture analysis metrics, such as those applied to PET scans to detect neoplasms, could prove helpful in linking qualitative statements of phantom sphere and rod visibility to quantified parameters...
November 12, 2018: Medical Physics
https://read.qxmd.com/read/30402704/differentiation-of-triple-negative-breast-cancer-from-other-subtypes-through-whole-tumor-histogram-analysis-on-multiparametric-mr-imaging
#18
Tianwen Xie, Qiufeng Zhao, Caixia Fu, Qianming Bai, Xiaoyan Zhou, Lihua Li, Robert Grimm, Li Liu, Yajia Gu, Weijun Peng
PURPOSE: To identify triple-negative (TN) breast cancer imaging biomarkers in comparison to other molecular subtypes using multiparametric MR imaging maps and whole-tumor histogram analysis. MATERIALS AND METHODS: This retrospective study included 134 patients with invasive ductal carcinoma. Whole-tumor histogram-based texture features were extracted from a quantitative ADC map and DCE semi-quantitative maps (washin and washout). Univariate analysis using the Student's t test or Mann-Whitney U test was performed to identify significant variables for differentiating TN cancer from other subtypes...
November 6, 2018: European Radiology
https://read.qxmd.com/read/30396657/using-ct-texture-analysis-to-differentiate-between-nasopharyngeal-carcinoma-and-age-matched-adenoid-controls
#19
Amy Tsai, Karen Buch, Akifumi Fujita, Muhammad Mustafa Qureshi, Hirofumi Kuno, Margaret N Chapman, Baojun Li, Masafumi Oda, Minh Tam Truong, Osamu Sakai
OBJECTIVES: To investigate the use of texture analysis to quantitatively distinguish nasopharyngeal carcinoma (NPC) from normal adenoid on CT. METHODS: In this IRB-approved, retrospective study, nasopharyngeal tissues in 13 patients with NPC and 13 control patients were manually contoured, segmented, and imported to an in-house developed texture analysis program, which extracted 41 texture features. Basic descriptive statistics were performed to evaluate for differences in texture parameters between NPC and controls...
November 2018: European Journal of Radiology
https://read.qxmd.com/read/30372965/non-destructive-monitoring-of-the-yoghurt-fermentation-phase-by-an-image-analysis-of-laser-diffraction-patterns-characterization-of-cow-s-goat-s-and-sheep-s-milk
#20
Samuel Verdú, José M Barat, Raúl Grau
Monitoring yogurt fermentation by the image analysis of diffraction patterns generated by the laser-milk interaction was explored. Cow's, goat's and sheep's milks were tested. Destructive physico-chemical analyses were done after capturing images during the processes to study the relationships between data blocks. Information from images was explored by applying a spectral phasor from which regions of interest were determined in each image channel. The histograms of frequencies from each region were extracted, which showed evolution according to textural modifications...
February 15, 2019: Food Chemistry
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