keyword
https://read.qxmd.com/read/38646145/molecular-diversity-in-isocitrate-dehydrogenase-wild-type-glioblastoma
#1
REVIEW
Jawad Fares, Yizhou Wan, Richard Mair, Stephen J Price
In the dynamic landscape of glioblastoma, the 2021 World Health Organization Classification of Central Nervous System tumours endeavoured to establish biological homogeneity, yet isocitrate dehydrogenase-wild-type (IDH-wt) glioblastoma persists as a tapestry of clinical and molecular diversity. Intertumoural heterogeneity in IDH-wt glioblastoma presents a formidable challenge in treatment strategies. Recent strides in genetics and molecular biology have enhanced diagnostic precision, revealing distinct subtypes and invasive patterns that influence survival in patients with IDH-wt glioblastoma...
2024: Brain communications
https://read.qxmd.com/read/38645178/all-trans-retinoic-acid-induces-durable-tumor-immunity-in-idh-mutant-gliomas-by-rescuing-transcriptional-repression-of-the-crbp1-retinoic-acid-axis
#2
Aparna Rao, Xiaoran Zhang, Anthony R Cillo, Jonathan H Sussman, Poorva Sandlesh, Antonio Corral Tarbay, Arka N Mallela, Carly Cardello, Katharine Krueger, Jessica Xu, Alex Li, Jason Xu, Jonathan Patterson, Ebrar Akca, Angelo Angione, Emade Jaman, Wi Jin Kim, Jordan Allen, Abhishek Venketeswaran, Pascal O Zinn, Robert Parise, Jan Beumer, Anette Duensing, Eric C Holland, Robert Ferris, Stephen J Bagley, Tullia C Bruno, Dario A A Vignali, Sameer Agnihotri, Nduka M Amankulor
Diffuse gliomas are epigenetically dysregulated, immunologically cold, and fatal tumors characterized by mutations in isocitrate dehydrogenase (IDH). Although IDH mutations yield a uniquely immunosuppressive tumor microenvironment, the regulatory mechanisms that drive the immune landscape of IDH mutant (IDHm) gliomas remain unknown. Here, we reveal that transcriptional repression of retinoic acid (RA) pathway signaling impairs both innate and adaptive immune surveillance in IDHm glioma through epigenetic silencing of retinol binding protein 1 (RBP1) and induces a profound anti-inflammatory landscape marked by loss of inflammatory cell states and infiltration of suppressive myeloid phenotypes...
April 13, 2024: bioRxiv
https://read.qxmd.com/read/38633656/analysis-of-cuproptosis-related-genes-in-prognosis-and-immune-infiltration-in-grade-4-diffuse-gliomas
#3
JOURNAL ARTICLE
Hui Liu, Xin Bao, Zhirui Zeng, Wei Liu, Meifang Li
BACKGROUND: Grade 4 diffuse gliomas are highly malignant tumours with poor prognosis. Cuproptosis is a novel form of cell death. Cuproptosis genes are associated with various tumours and affect the prognosis of patients with these tumours. However, the relationship between cuproptosis and grade 4 diffuse gliomas remains unclear. METHODS: Differentially expressed genes associated with cuproptosis in grade 4 diffuse gliomas were identified. Second, the prognostic model was established by univariate and multivariate COX regression analyses, and the genes (p < 0...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38633388/co-expression-of-immune-checkpoints-in-glioblastoma-revealed-by-single-nucleus-rna-sequencing-and-spatial-transcriptomics
#4
JOURNAL ARTICLE
Dingyi Yuan, Wenting Chen, Shasha Jin, Wei Li, Wanmei Liu, Liu Liu, Yinhao Wu, Yuxin Zhang, Xiaoyu He, Jingwei Jiang, Hongbin Sun, Xiangyu Liu, Jun Liu
Glioblastoma (GBM) is one of the most malignant tumors of the central nervous system. The pattern of immune checkpoint expression in GBM remains largely unknown. We performed snRNA-Seq and spatial transcriptomic (ST) analyses on untreated GBM samples. 8 major cell types were found in both tumor and adjacent normal tissues, with variations in infiltration grade. Neoplastic cells_6 was identified in malignant cells with high expression of invasion and proliferator-related genes, and analyzed its interactions with microglia, MDM cells and T cells...
December 2024: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/38630384/rebound-growth-of-braf-mutant-pediatric-glioma-cells-after-mapki-withdrawal-is-associated-with-mapk-reactivation-and-secretion-of-microglia-recruiting-cytokines
#5
JOURNAL ARTICLE
Daniela Kocher, Lei Cao, Romain Guiho, Melanie Langhammer, Yun-Lu Lai, Pauline Becker, Hiba Hamdi, Dennis Friedel, Florian Selt, David Vonhören, Julia Zaman, Gintvile Valinciute, Sonja Herter, Daniel Picard, Johanna Rettenmeier, Kendra K Maass, Kristian W Pajtler, Marc Remke, Andreas von Deimling, Stefan Pusch, Stefan M Pfister, Ina Oehme, David T W Jones, Sebastian Halbach, Tilman Brummer, Juan Pedro Martinez-Barbera, Olaf Witt, Till Milde, Romain Sigaud
INTRODUCTION: Patients with pediatric low-grade gliomas (pLGGs), the most common primary brain tumors in children, can often benefit from MAPK inhibitor (MAPKi) treatment. However, rapid tumor regrowth, also referred to as rebound growth, may occur once treatment is stopped, constituting a significant clinical challenge. METHODS: Four patient-derived pediatric glioma models were investigated to model rebound growth in vitro based on viable cell counts in response to MAPKi treatment and withdrawal...
April 17, 2024: Journal of Neuro-oncology
https://read.qxmd.com/read/38617245/irf8-driven-reprogramming-of-the-immune-microenvironment-enhances-anti-tumor-adaptive-immunity-and-reduces-immunosuppression-in-murine-glioblastoma
#6
Megan Montoya, Sara A Collins, Pavlina Chuntova, Trishna S Patel, Takahide Nejo, Akane Yamamichi, Noriyuki Kasahara, Hideho Okada
BACKGROUND: Glioblastoma (GBM) has a highly immunosuppressive tumor immune microenvironment (TIME), largely mediated by myeloid-derived suppressor cells (MDSCs). Here, we utilized a retroviral replicating vector (RRV) to deliver Interferon Regulatory Factor 8 (IRF8), a master regulator of type 1 conventional dendritic cell (cDC1) development, in a syngeneic murine GBM model. We hypothesized that RRV-mediated delivery of IRF8 could "reprogram" intratumoral MDSCs into antigen-presenting cells (APCs) and thereby restore T-cell responses...
April 3, 2024: bioRxiv
https://read.qxmd.com/read/38614152/fluorine-18-labeling-pegylated-6-boronotryptophan-for-pet-scanning-of-mice-for-assessing-the-pharmacokinetics-for-boron-neutron-capture-therapy-of-brain-tumors
#7
JOURNAL ARTICLE
Xiang-Ping Chen, Fu-Chun Hsu, Kwei-Yuan Huang, Deng-Shan Hsie, Shio-Shio Farn, Rong-Jiun Sheu, Chung-Shan Yu
Two tryptophan compound classes 5- and 6-borono PEGylated boronotryptophan derivatives have been prepared for assessing their aqueous solubility as formulation of injections for boron neutron capture therapy (BNCT). The PEGylation has improved their aqueous solubility thereby increasing their test concentration in 1 mM without suffering from toxicity. In-vitro uptake assay of PEGylated 5- and 6-boronotryptophan showed that the B-10 concentration can reach 15-50 ppm in U87 cell whereas the uptake in LN229 cell varies...
April 11, 2024: Bioorganic & Medicinal Chemistry Letters
https://read.qxmd.com/read/38607056/mesenchymal-stem-cell-based-therapy-against-gliomas
#8
REVIEW
Sisa M Santillán-Guaján, Mehdi H Shahi, Javier S Castresana
Glioblastoma is the most aggressive, malignant, and lethal brain tumor of the central nervous system. Its poor prognosis lies in its inefficient response to currently available treatments that consist of surgical resection, radiotherapy, and chemotherapy. Recently, the use of mesenchymal stem cells (MSCs) as a possible kind of cell therapy against glioblastoma is gaining great interest due to their immunomodulatory properties, tumor tropism, and differentiation into other cell types. However, MSCs seem to present both antitumor and pro-tumor properties depending on the tissue from which they come...
April 2, 2024: Cells
https://read.qxmd.com/read/38596661/bulk-and-single-cells-transcriptomes-with-experimental-validation-identify-usp18-as-a-novel-glioma-prognosis-and-proliferation-indicator
#9
JOURNAL ARTICLE
Yang Chen, Ren Li, Ziao Li, Biao Yang, Jianhang He, Jiayu Li, Peize Li, Zihan Zhou, Yongqiang Wu, Yuanli Zhao, Geng Guo
The mechanism by which ubiquitin-specific protease 18 (USP18) (enzyme commission: 3.4.19.12) inhibition in cancer promotes cell pyroptosis via the induction of interferon (IFN)-stimulated genes has been recently demonstrated. It is also known that USP18 influences the epithelial-mesenchymal transition of glioma cells. In the present study, the upregulation of USP18 in glioma was revealed through bulk transcriptome analysis, which was associated with poor prognosis in patients with glioma. Furthermore, USP18 levels affected the response to immunotherapy in patients with glioma...
May 2024: Experimental and Therapeutic Medicine
https://read.qxmd.com/read/38596290/gut-microbiota-composition-is-associated-with-the-efficacy-of-delta-24-rgdox-in-malignant-gliomas
#10
JOURNAL ARTICLE
Natalie M Meléndez-Vázquez, Teresa T Nguyen, Xuejun Fan, Andrés R López-Rivas, Juan Fueyo, Candelaria Gomez-Manzano, Filipa Godoy-Vitorino
Glioblastoma, the most common primary brain tumor, has a 6.8% survival rate 5 years post diagnosis. Our team developed an oncolytic adenovirus with an OX-40L expression cassette named Delta-24-RGDOX. While studies have revealed the interaction between the gut microbiota and immunotherapy agents, there are no studies linking the gut microbiota with viroimmunotherapy efficacy. We hypothesize that gut bacterial signatures will be associated with oncolytic viral therapy efficacy. To test this hypothesis, we evaluated the changes in gut microbiota in two mouse cohorts: (1) GSC-005 glioblastoma-bearing mice treated orally with indoximod, an immunotherapeutic agent, or with Delta-24-RGDOX by intratumoral injection and (2) a mouse cohort harboring GL261-5 tumors used to mechanistically evaluate the importance of CD4+ T cells in relation to viroimmunotherapy efficacy...
March 21, 2024: Mol Ther Oncol
https://read.qxmd.com/read/38594259/integration-of-3d-bioprinting-and-multi-algorithm-machine-learning-identified-glioma-susceptibilities-and-microenvironment-characteristics
#11
JOURNAL ARTICLE
Min Tang, Shan Jiang, Xiaoming Huang, Chunxia Ji, Yexin Gu, Ying Qi, Yi Xiang, Emmie Yao, Nancy Zhang, Emma Berman, Di Yu, Yunjia Qu, Longwei Liu, David Berry, Yu Yao
Glioma, with its heterogeneous microenvironments and genetic subtypes, presents substantial challenges for treatment prediction and development. We integrated 3D bioprinting and multi-algorithm machine learning as a novel approach to enhance the assessment and understanding of glioma treatment responses and microenvironment characteristics. The bioprinted patient-derived glioma tissues successfully recapitulated molecular properties and drug responses of native tumors. We then developed GlioML, a machine learning workflow incorporating nine distinct algorithms and a weighted ensemble model that generated robust gene expression-based predictors, each reflecting the diverse action mechanisms of various compounds and drugs...
April 9, 2024: Cell Discovery
https://read.qxmd.com/read/38591780/zinc-finger-protein207-orchestrates-glioma-migration-through-regulation-of-epithelial-mesenchymal-transition
#12
JOURNAL ARTICLE
Chao Zhao, Yuduo Guo, Yujia Chen, Guanjie Shang, Dixiang Song, Jun Wang, Jingjing Yang, Hongwei Zhang
BACKGROUND: Glioma represents the predominant primary malignant brain tumor. For several years, molecular profiling has been instrumental in the management and therapeutic stratification of glioma, providing a deeper understanding of its biological complexity. Accumulating evidence unveils the putative involvement of zinc finger proteins (ZNFs) in cancer. This study aimed to elucidate the role and significance of ZNF207 in glioma. METHODS: Utilizing online data such as The Cancer Genome Atlas (TCGA), the Chinese Glioma Genome Atlas (CGGA), the Genotype-Tissue Expression (GTEx) project, the Clinical Proteomic Tumor Analysis Consortium (CPTAC), and the Human Protein Atlas (HPA) databases, in conjunction with bioinformatics methodologies including GO, KEGG, GSEA, CIBERSORT immune cell infiltration estimation, and protein-protein interaction (PPI) analysis, enabled a comprehensive exploration of ZNF207's involvement in gliomagenesis...
April 9, 2024: Environmental Toxicology
https://read.qxmd.com/read/38590799/ccr2-and-ccr5-co-inhibition-modulates-immunosuppressive-myeloid-milieu-in-glioma-and-synergizes-with-anti-pd-1-therapy
#13
JOURNAL ARTICLE
Ayush Pant, Brandon Hwa-Lin Bergsneider, Siddhartha Srivastava, Timothy Kim, Aanchal Jain, Sadhana Bom, Pavan Shah, Nivedha Kannapadi, Kisha Patel, John Choi, Kwang Bog Cho, Rohit Verma, Caren Yu-Ju Wu, Henry Brem, Betty Tyler, Drew M Pardoll, Christina Jackson, Michael Lim
Immunotherapy has revolutionized the treatment of cancers. Reinvigorating lymphocytes with checkpoint blockade has become a cornerstone of immunotherapy for multiple tumor types, but the treatment of glioblastoma has not yet shown clinical efficacy. A major hurdle to treat GBM with checkpoint blockade is the high degree of myeloid-mediated immunosuppression in brain tumors that limits CD8 T-cell activity. A potential strategy to improve anti-tumor efficacy against glioma is to use myeloid-modulating agents to target immunosuppressive cells, such as myeloid-derived suppressor cells (MDSCs) in the tumor microenvironment...
2024: Oncoimmunology
https://read.qxmd.com/read/38576744/exploring-the-autophagy-related-pathogenesis-of-active-ulcerative-colitis
#14
JOURNAL ARTICLE
Zhuo-Zhi Gong, Teng Li, He Yan, Min-Hao Xu, Yue Lian, Yi-Xuan Yang, Wei Wei, Tao Liu
BACKGROUND: The pathogenesis of ulcerative colitis (UC) is complex, and recent therapeutic advances remain unable to fully alleviate the condition. AIM: To inform the development of novel UC treatments, bioinformatics was used to explore the autophagy-related pathogenesis associated with the active phase of UC. METHODS: The GEO database was searched for UC-related datasets that included healthy controls who met the screening criteria. Differential analysis was conducted to obtain differentially expressed genes (DEGs)...
March 26, 2024: World Journal of Clinical Cases
https://read.qxmd.com/read/38575072/a-blood-brain-barrier-and-blood-brain-tumor-barrier-penetrating-sirna-delivery-system-targeting-gliomas-for-brain-tumor-immunotherapy
#15
JOURNAL ARTICLE
Lin Tang, Rui Zhang, Yusi Wang, Mohan Liu, Die Hu, Yefeng Wang, Li Yang
Glioma is recognized as the most infiltrative and lethal form of central nervous system tumors and is known for its limited response to standard therapeutic interventions, high recurrence rate, and unfavorable prognosis. Recent progress in gene and immunotherapy presents a renewed sense of optimism in the treatment of glioblastoma. However, the barriers to overcome include the blood-brain barrier (BBB) and the blood-brain tumor barrier (BBTB), as well as the suppressive immune microenvironment. Overcoming these barriers remains a significant challenge...
April 2, 2024: Journal of Controlled Release
https://read.qxmd.com/read/38559080/elucidation-and-pharmacologic-targeting-of-master-regulator-dependencies-in-coexisting-diffuse-midline-glioma-subpopulations
#16
Ester Calvo Fernández, Lorenzo Tomassoni, Xu Zhang, Junqiang Wang, Aleksandar Obradovic, Pasquale Laise, Aaron T Griffin, Lukas Vlahos, Hanna E Minns, Diana V Morales, Christian Simmons, Matthew Gallitto, Hong-Jian Wei, Timothy J Martins, Pamela S Becker, John R Crawford, Theophilos Tzaridis, Robert J Wechsler-Reya, James Garvin, Robyn D Gartrell, Luca Szalontay, Stergios Zacharoulis, Cheng-Chia Wu, Zhiguo Zhang, Andrea Califano, Jovana Pavisic
Diffuse Midline Gliomas (DMGs) are universally fatal, primarily pediatric malignancies affecting the midline structures of the central nervous system. Despite decades of clinical trials, treatment remains limited to palliative radiation therapy. A major challenge is the coexistence of molecularly distinct malignant cell states with potentially orthogonal drug sensitivities. To address this challenge, we leveraged established network-based methodologies to elucidate Master Regulator (MR) proteins representing mechanistic, non-oncogene dependencies of seven coexisting subpopulations identified by single-cell analysis-whose enrichment in essential genes was validated by pooled CRISPR/Cas9 screens...
March 17, 2024: bioRxiv
https://read.qxmd.com/read/38547657/identification-of-creb5-as-a-prognostic-and-immunotherapeutic-biomarker-in-glioma-through-multi-omics-pan-cancer-analysis
#17
JOURNAL ARTICLE
Zhixuan Wu, Xiaowu Wang, Haodong Wu, Shengwei Du, Ziqiong Wang, Shicheng Xie, Rongrong Zhang, Guorong Chen, Hanbin Chen
BACKGROUND: The functional relevance of cyclic adenosine monophosphate (cAMP)-response element-binding protein 5 (CREB5) in cancers remains elusive, despite its significance as a member of the CREB family. The current research aims to explore the role of CREB5 in multiple cancers. METHODS: Pan-cancer analysis was performed to explore the expression patterns, prognostic value, mutational landscape as well as single-cell omic, immunologic, and drug sensitivity profiles of CREB5...
March 21, 2024: Computers in Biology and Medicine
https://read.qxmd.com/read/38544393/effects-of-glutamine-synthetase-on-neovascularization-in-glioma-in-vivo-mr-vessel-size-imaging-and-histology
#18
JOURNAL ARTICLE
Tianwei Song, Dandan Wang, Yanan Zhang, Hong Hao, Guodong Li, Xiping Ding, Zongtao Hu, Zhi Zhang, Yan Liu, Hongzhi Wang, Xianglin Li, Junchao Qian
BACKGROUND: Glutamine Synthetase (GS) could induce vascular sprouting through the improvement of endothelial cell migration in inflammatory diseases. MR vessel-size imaging has been proposed as a valuable approach for visualizing the underlying angiogenic processes in the brain. OBJECTIVE: This study aims to investigate the role of GS in the neovascularization of gliomas through the utilization of MR vessel-size imaging and histopathological techniques. METHODS: In this exploratory animal study, we randomly divided the C6 glioma rat models into a control group and an L-methionine sulfoximine (MSO) treatment group...
March 27, 2024: Current medical imaging
https://read.qxmd.com/read/38540119/comprehensive-transcriptomic-profiling-of-diverse-brain-tumor-types-uncovers-complex-structures-of-the-brain-tumor-microenvironment
#19
JOURNAL ARTICLE
Jiin Choi, Hee Jin Cho
Various types of brain tumors occur in both children and adults. These tumors manifest with different characteristics such as malignancy, cellular lineage, location of origin, and genomic profile. Recently, immunotherapy, which manipulates immune cells in the tumor microenvironment (TME) to kill tumor cells, has attracted attention as a treatment strategy for tumors. Here, we analyzed the transcriptomic architecture of the brain tumor microenvironment to provide potential guidelines to overcome the therapeutic vulnerabilities to brain tumors...
February 23, 2024: Biomedicines
https://read.qxmd.com/read/38538274/nop14-as-a-potential-predictor-of-adult-type-diffuse-glioma-prognosis-and-immunotherapy-is-related-to-cell-migration-proliferation-and-cd8-t-cell-infiltration
#20
JOURNAL ARTICLE
Qiu-Si Tian, Jing Cheng, Zhi-Jun Bao
BACKGROUND: World Health Organization (WHO) grade 4 adult-type diffuse glioma is the most malignant primary tumor of the brain. Nucleolar protein 14 ( NOP14 ) is recognized to contribute significantly to the assembly of small ribosomal subunits. However, the specific involvement of NOP14 in diverse cancers remains poorly understood, particularly its role in adult-type diffuse glioma, which has yet to be elucidated. METHODS: A total of 20 adult-type diffuse glioma samples with varying WHO stages were collected...
March 15, 2024: Frontiers in Bioscience (Landmark Edition)
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