keyword
https://read.qxmd.com/read/38618902/characterisation-of-the-mitochondrial-genome-and-phylogenetic-analysis-of-toxocara-apodemi-nematoda-ascarididae
#1
JOURNAL ARTICLE
Y Gao, Y Hu, S Xu, H Liang, H Lin, T H Yin, K Zhao
We first sequenced and characterised the complete mitochondrial genome of Toxocara apodeme, then studied the evolutionary relationship of the species within Toxocaridae. The complete mitochondrial genome was amplified using PCR with 14 specific primers. The mitogenome length was 14303 bp in size, including 12 PCGs (encoding 3,423 amino acids), 22 tRNAs, 2 rRNAs, and 2 NCRs, with 68.38% A+T contents. The mt genomes of T. apodemi had relatively compact structures with 11 intergenic spacers and 5 overlaps. Comparative analyses of the nucleotide sequences of complete mt genomes showed that T...
April 15, 2024: Journal of Helminthology
https://read.qxmd.com/read/38489989/ncrs-a-resource-of-non-coding-rnas-in-sepsis
#2
JOURNAL ARTICLE
Baocai Zhong, Yongfang Dai, Li Chen, Xinying Xu, Yuxi Lan, Leyao Deng, Liping Ren, Nanchao Luo, Lin Ning
Sepsis, a life-threatening condition triggered by the body's response to infection, presents a significant global healthcare challenge characterized by disarrayed host responses, widespread inflammation, organ impairment, and heightened mortality rates. This study introduces the ncRS database (https://www.ncrdb.cn), a meticulously curated repository housing 1144 experimentally validated non-coding RNAs (ncRNAs) intricately linked with sepsis. ncRS offers comprehensive RNA data, exhaustive experimental insights, and integrated annotations from diverse databases...
March 11, 2024: Computers in Biology and Medicine
https://read.qxmd.com/read/38462552/exploring-the-role-of-symbiotic-modifier-peptidases-in-the-legume%C3%A2-%C3%A2-rhizobium-symbiosis
#3
REVIEW
Prithwi Ghosh, Joydeep Chakraborty
Legumes can establish a mutual association with soil-derived nitrogen-fixing bacteria called 'rhizobia' forming lateral root organs called root nodules. Rhizobia inside the root nodules get transformed into 'bacteroids' that can fix atmospheric nitrogen to ammonia for host plants in return for nutrients and shelter. A substantial 200 million tons of nitrogen is fixed annually through biological nitrogen fixation. Consequently, the symbiotic mechanism of nitrogen fixation is utilized worldwide for sustainable agriculture and plays a crucial role in the Earth's ecosystem...
March 11, 2024: Archives of Microbiology
https://read.qxmd.com/read/38445806/effect-of-coffee-staining-and-simulated-oral-hygiene-methods-on-the-color-and-translucency-of-a-nanoceramic-resin
#4
JOURNAL ARTICLE
Luiz Felipe Schneider, Bruna Mueller, Rubens Nisie Tango, Claudia Angela Maziero Volpato
OBJECTIVE: Evaluate the color and translucency of a nanoceramic resin subjected to hygiene practices and immersion in coffee over time. MATERIALS AND METHODS: Specimens (n = 80, HT and LT, 0.5-mm thick) of a nanoceramic resin were obtained and were divided in groups according to the simulated oral hygiene: no intervention (NT), brushing with an electric brush and water (BN), brushing with an electric brush and toothpaste for 10 s (BT), and immersion in mouthwash for 30 s (MW)...
March 6, 2024: Journal of Esthetic and Restorative Dentistry
https://read.qxmd.com/read/38376984/plant-derived-nodule-specific-cysteine-rich-peptides-as-a-source-of-novel-biopesticides-for-controlling-citrus-greening-disease
#5
JOURNAL ARTICLE
Steven A Higgins, David O Igwe, Samuel Coradetti, John S Ramsey, Stacy L DeBlasio, Marco Pitino, Robert Shatters, Randall Niedz, Laura A Fleites, Michelle Heck
Nodule-specific cysteine-rich peptides (NCRs), encoded in the genome of the Mediterranean legume, Medicago truncatula Gaertn. (barrelclover) are known to regulate plant-microbe interactions. A subset of computationally-derived 20-mer peptide fragments from 182 NCR peptides were synthesized to identify those with activity against the unculturable vascular pathogen associated with citrus greening disease, ' Candidatus Liberibacter asiaticus' ( C Las). Grounded in a design of experiments framework, we evaluated the peptides in a screening pipeline involving three distinct assays: a bacterial culture assay with L...
February 20, 2024: Phytopathology
https://read.qxmd.com/read/38308356/instrumented-assessment-of-gait-disturbance-in-pmm2-cdg-adults-a-feasibility-analysis
#6
JOURNAL ARTICLE
Lara Cirnigliaro, Fabio Pettinato, Maria Stella Valle, Antonino Casabona, Agata Fiumara, Michele Vecchio, Valerio Amico, Renata Rizzo, Jaak Jaeken, Rita Barone, Matteo Cioni
BACKGROUND: Congenital disorders of glycosylation (CDG) are genetic diseases caused by impaired synthesis of glycan moieties linked to glycoconjugates. Phosphomannomutase 2 deficiency (PMM2-CDG), the most frequent CDG, is characterized by prominent neurological involvement. Gait disturbance is a major cause of functional disability in patients with PMM2-CDG. However, no specific gait assessment for PMM2-CDG is available. This study analyses gait-related parameters in PMM2-CDG patients using a standardized clinical assessment and instrumented gait analysis (IGA)...
February 2, 2024: Orphanet Journal of Rare Diseases
https://read.qxmd.com/read/38268299/psychometric-properties-of-the-persian-version-of-the-nursing-clinical-reasoning-scale
#7
JOURNAL ARTICLE
Touba Hosseinzadeh, Nastaran Mirfarhadi, Moluk Pouralizadeh, Kian Norouzi Tabrizi, Masoud Fallahi-Khoshknab, Hamid Reza Khankeh, Forozan Shokooh
AIM: The aim of this study was to translate the Nursing Clinical Reasoning Scale (NCRS) into Persian and evaluate its psychometric properties. DESIGN: This study was a methodological and cross-sectional study. METHODS: This methodological study was conducted in 2020 in a teaching hospital. After obtaining necessary permission from its developers, NCRS was translated into Persian through the method proposed by the World Health Organization...
January 2024: Nursing Open
https://read.qxmd.com/read/38236024/novel-antimicrobial-peptides-identified-in-legume-plant-medicago-truncatula
#8
JOURNAL ARTICLE
Areej A Alhhazmi, Sarah S Alluhibi, Rahaf Alhujaily, Maymona E Alenazi, Taif L Aljohani, Al-Anoud T Al-Jazzar, Ahaad D Aljabri, Razan Albaqami, Dalal Almutairi, Lujain K Alhelali, Hibah M Albasri, Yahya A Almutawif, Mohammad A Alturkostani, Abullah Z Almutairi
The discovery of new antibiotics is urgently needed, given the global expansion of antibiotic-resistant bacteria and the rising mortality rate. One of the initial lines of defense against microbial infections is antimicrobial peptides (AMPs). Plants can express hundreds of such AMPs as defensins and defensin-like peptides. The nodule-specific cysteine-rich (NCR) peptides are a class of defensin-like peptides that have evolved in rhizobial-legume symbioses. This study screened the antimicrobial activity of a subset of NCR sequences using online computational AMP prediction algorithms...
January 18, 2024: Microbiology Spectrum
https://read.qxmd.com/read/38217286/lbcas12a-nuclease-mediated-tiling-deletion-for-large-scale-targeted-editing-of-non-coding-regions-in-rice
#9
JOURNAL ARTICLE
Guigen Ma, Fang Yan, Bin Ren, Zhenwan Lu, Hao Xu, Fangxi Wu, Shaofang Li, Daowen Wang, Xueping Zhou, Huanbin Zhou
NTD method is the application of LbCas12a in the engineering of rice endogenous gene. Guided by libraries of crRNAs tiling on NCRs of SD1, 6 mutants with quantitative variations of rice height were generated and analyzed for the association between genotype and phenotype. Totally, NTD is a promising tool for molecular rice breeding.
January 11, 2024: Plant communications
https://read.qxmd.com/read/38150006/should-the-diameter-of-the-proximal-femoral-nail-be-large-enough-to-fill-the-canal-in-the-treatment-of-intertrochanteric-femoral-fracture-in-patients-over-fifty
#10
JOURNAL ARTICLE
Sun Hwan Choi, Chang Ju Lee, Yoon Je Cho, Young-Soo Chun, Kee Hyung Rhyu
PURPOSE: Many studies have been conducted to evaluate the effects of nail shape, design, or length on the treatment of intertrochanteric fractures. However, the clinical implications of the nail diameter remain unclear. METHODS: This study was conducted with 191 patients aged ≥ 50 years with unilateral intertrochanteric fractures treated with the same type of short cephalomedullary nail and followed for at least one year. We recorded the reduction type, tip-apex distance, cortical contact of the nail, and nail/canal diameter ratio (NCR) just distal to the locking screw...
December 27, 2023: International Orthopaedics
https://read.qxmd.com/read/38148073/altered-ncr3-splice-variants-may-result-in-deficient-nk-cell-function-in-renal-cell-carcinoma-patients
#11
JOURNAL ARTICLE
Xuelei Wang, Liqun Huang, Xiaofei Wen, Dongyang Li, Guosheng Yang, Junhua Zheng
BACKGROUND/AIM: The natural killer (NK) cell function of patients with malignant tumours may be suppressed by deficiency, and the poor prognosis of renal cell carcinoma (RCC) patients may be due to escape from NK cell cytotoxicity, especially with respect to natural cytotoxicity receptors (NCRs) on the NK cell surface. However, the specific mechanism remains unclear. Therefore, in this study, we sought to explore the role of NCR, especially NCR3 splice variants, in the process of NK cell deficiency in RCC patients...
2024: In Vivo
https://read.qxmd.com/read/38092982/-german-version-of-the-northoff-scale-for-subjective-experience-in-catatonia-nssc-dv-a-validated-instrument-for-examination-of-the-subjective-experience-in-catatonia
#12
JOURNAL ARTICLE
Geva A Brandt, Stefan Fritze, Maria Krayem, Jonas Daub, Sebastian Volkmer, Jacqueline Kukovic, Andreas Meyer-Lindenberg, Georg Northoff, Katharina M Kubera, Robert Christian Wolf, Dusan Hirjak
Patients with catatonia often show serious motor, affective and behavioral symptoms, behind which the subjective experience often remains hidden. Therefore, this study disseminates our own systematic empirical investigation of the subjective experience of catatonia patients to a German-speaking audience of clinicians and researchers. Based on current evidence and the clinical experience of the authors, the self-report questionnaire Northoff Scale for Subjective Experience in Catatonia (NSSC) was modified, extended and validated and now consists of 26 items capturing the subjective experience of catatonia in its clinical diversity...
January 2024: Der Nervenarzt
https://read.qxmd.com/read/38056040/low-h3k27me3-deposition-at-cyp82e4-determines-the-nicotinic-conversion-rate-in-nicotiana-tabacum
#13
JOURNAL ARTICLE
Shiyang Song, Yaqi Wang, Jin Wang, Yanfang Liu, Xingzi Zhang, Aiguo Yang, Fengxia Li
Nicotine conversion is the process by which nornicotine is synthesized from nicotine. The capacity of a plant to carry out this process is represented by the nicotine conversion rate (NCR), which is defined as the percentage of nornicotine content out of the total nicotine + nornicotine content. Nicotine conversion in tobacco is mediated by CYP82E4. Although there are cultivar-specific differences in NCR, these do not correspond to differences in the CYP82E4 promoter or gene body sequences, and little is known about the underlying regulatory mechanism...
November 30, 2023: Plant Physiology and Biochemistry: PPB
https://read.qxmd.com/read/38035776/vista-non-redundantly-regulates-proliferation-and-cd69low-%C3%AE-%C3%AE-t-cell-accumulation-in-the-intestine-in-murine-sepsis
#14
JOURNAL ARTICLE
Chyna C Gray, Brandon E Armstead, Chun-Shiang Chung, Yaping Chen, Alfred Ayala
Sepsis is a dysregulated systemic immune response to infection that is responsible for ∼35% of in-hospital deaths at a significant fiscal health care cost. Our laboratory, among others, has demonstrated the efficacy of targeting negative checkpoint regulators (NCRs) to improve survival in a murine model of sepsis, cecal ligation and puncture (CLP). B7-CD28 superfamily member, V-domain Immunoglobulin Suppressor of T cell Activation (VISTA), is an ideal candidate for strategic targeting in sepsis. VISTA is a 35-45 kDa type 1 transmembrane protein with unique biology that sets it apart from all other NCRs...
November 30, 2023: Journal of Leukocyte Biology
https://read.qxmd.com/read/38021349/-in-vitro-effect-of-mouthrinses-on-the-microhardness-of-three-different-nanohybrid-composite-resins
#15
JOURNAL ARTICLE
Jhonn Luis Bernaldo-Faustino, Julissa Amparo Dulanto-Vargas, Kilder Maynor Carranza-Samanez
INTRODUCTION: Daily use of different mouthrinses at home or in the dental office can alter the properties of resin hardness. The present study aimed to compare Vickers microhardness (VHN) in vitro of nanohybrid composite resins (NCRs) immersed in mouthrinses. MATERIALS AND METHODS: In total, 120 discs (10 ⨯ 2 mm) were prepared from three NCR shade A2 ( n  = 40/group) with FiltekTM Z350 XT (Z350XT), Tetric EvoCeram (TEC), and Polofil NHT (PNHT)...
2023: International Journal of Dentistry
https://read.qxmd.com/read/38001333/targeted-mutagenesis-of-medicago-truncatula-nodule-specific-cysteine-rich-ncr-genes-using-the-agrobacterium-rhizogenes-mediated-crispr-cas9-system
#16
JOURNAL ARTICLE
Berivan Güngör, János Barnabás Biró, Ágota Domonkos, Beatrix Horváth, Péter Kaló
The host-produced nodule specific cysteine-rich (NCR) peptides control the terminal differentiation of endosymbiotic rhizobia in the nodules of IRLC legumes. Although the Medicago truncatula genome encodes about 700 NCR peptides, only few of them have been proven to be crucial for nitrogen-fixing symbiosis. In this study, we applied the CRISPR/Cas9 gene editing technology to generate knockout mutants of NCR genes for which no genetic or functional data were previously available. We have developed a workflow to analyse the mutation and the symbiotic phenotype of individual nodules formed on Agrobacterium rhizogenes-mediated transgenic hairy roots...
November 24, 2023: Scientific Reports
https://read.qxmd.com/read/37991369/shared-sequence-characteristics-identified-in-non-canonical-rearrangements-of-hsv-1-genomes
#17
JOURNAL ARTICLE
Alina Shitrit, Valerya Nisnevich, Nofar Rozenshtein, Hila Kobo, Hoang Van Phan, Savaş Tay, Moriah Szpara, Matthew D Weitzman, Nir Drayman, Oren Kobiler
Mutations and genetic rearrangements are the primary driving forces of evolution. Viruses provide valuable model systems for investigating these mechanisms due to their rapid evolutionary rates and vast genetic variability. To investigate genetic rearrangements in the double-stranded DNA genome of herpes simplex virus type 1, the viral population was serially passaged in various cell types. The serial passaging led to formation of defective genomes, resulted from cell-specific non-canonical rearrangements (NCRs)...
November 22, 2023: Journal of Virology
https://read.qxmd.com/read/37946626/generation-of-aromatic-n-heterocyclic-radicals-for-functionalization-of-unactivated-alkenes
#18
JOURNAL ARTICLE
Lu Wang, Minxu Shi, Xiaoping Chen, Nicholas Su, Weili Luo, Xiaheng Zhang
Nitrogen-centered radicals (NCRs) have been widely recognized as versatile synthetic intermediates for the construction of nitrogen containing molecules of high value. As such, there has been a long-standing interest in the field of organic synthesis to develop novel nitrogen-based radicals and explore their inherent reactivity. In this study, we present the generation of aromatic N-heterocyclic radicals and their application in a novel and diverse functionalization of unactivated alkenes. Bench-stable aromatic N-heterocyclic pyridinium salts were employed as crucial NCR precursors, which enabled the efficient conversion of various unactivated alkenes into medicinally relevant alkylated N-heterocyclic amines...
November 9, 2023: Angewandte Chemie
https://read.qxmd.com/read/37936308/the-impact-of-the-nasal-mucosal-flap-on-tissue-remodeling-after-sinus-bone-drilling-in-rabbit-models
#19
JOURNAL ARTICLE
Cao Lv, Cheng Li, Jing Qu, Yi Dong, Zhenxiao Huang, Yan Sun, Shunjiu Cui, Qian Huang, Bin Wang, Mingrui Huo, Bing Zhou
BACKGROUND: Frontal sinus surgery remained a challenge of restenosis or obliteration of the drainage pathway caused by the scarring and neo-osteogenesis after mucosal stripping and bone drill-out. The pedicled or free nasal mucosal flap is typically used to repair the exposed bone surface to avoid or reduce recurrence. OBJECTIVE: This study aimed to explore the histopathological mechanism of mucosal flaps repairing bare bone after mucosal resection and bone drill-out in the rabbit model...
November 7, 2023: American Journal of Rhinology & Allergy
https://read.qxmd.com/read/37893494/exhaled-nitric-oxide-and-olfactory-dysfunction-in-patients-with-asthma-association-with-chronic-rhinosinusitis
#20
JOURNAL ARTICLE
Takashi Oda, Hiroshi Iwamoto, Sachio Takeno, Tomohiro Kawasumi, Kota Takemoto, Manabu Nishida, Nobuyuki Chikuie, Yuichiro Horibe, Kakuhiro Yamaguchi, Shinjiro Sakamoto, Naoko Higaki, Takayuki Taruya, Yasushi Horimasu, Takeshi Masuda, Takao Hamamoto, Taku Nakashima, Takashi Ishino, Tsutomu Ueda, Kazunori Fujitaka, Hironobu Hamada, Noboru Hattori
Objectives : Olfactory dysfunction is a clinical sign that is important to detect with coexistent upper airway comorbidities in patients with asthma. This study aimed to investigate the etiology of olfactory dysfunction in patients with asthma and the relationship between fractional exhaled nitric oxide (FeNO) levels. Materials and Methods : This study included 47 asthma patients who were evaluated for olfactory dysfunction at Hiroshima University Hospital between 2012 and 2020. The etiologies of olfactory dysfunction were evaluated, and they were classified according to the FeNO levels of patients with asthma...
October 5, 2023: Medicina
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