keyword
https://read.qxmd.com/read/38125519/integrated-analysis-of-the-lncrna-associated-competing-endogenous-rna-network-in-salt-sensitivity-of-blood-pressure
#1
JOURNAL ARTICLE
Wenjuan Peng, Yunyi Xie, Juan Xia, Han Qi, Kuo Liu, Bingxiao Li, Fengxu Zhang, Fuyuan Wen, Ling Zhang
Accumulating evidence showed that competing endogenous RNA (ceRNA) mechanism plays a pivotal role in salt sensitivity of blood pressure (SSBP). We constructed a ceRNA network based on SSBP-related differently expressed lncRNAs (2), mRNAs (73) and miRNAs (18). Bioinformatic analyses were utilized to analyze network and found network genes participate in biological pathways related to SSBP pathogenesis such as regulation of nitric oxide biosynthetic process (GO:0045,428) and cellular response to cytokine stimulus (GO:0071,345)...
December 2023: Heliyon
https://read.qxmd.com/read/37525657/in-silico-analysis-of-serum-mirna-profiles-in-seronegative-and-seropositive-rheumatoid-arthritis-patients-by-small-rna-sequencing
#2
JOURNAL ARTICLE
Xiao-Hong He, Yun-Ting Xiao, Wen-Ying Chen, Mao-Jie Wang, Xiao-Dong Wu, Li-Yan Mei, Kai-Xin Gao, Qing-Chun Huang, Run-Yue Huang, Xiu-Min Chen
Rheumatoid arthritis (RA) is a refractory autoimmune disease, affecting about 1% of the world's population. RA is divided into seronegative RA and seropositive RA. However, biomarkers for discriminating between seronegative and seropositive RA have not been reported. In this study, we profiled serum miRNAs in seronegative RA patients (N-RA), seropositive RA patients (P-RA) and healthy controls (HC) by small RNA sequencing. Results indicated that compared with HC group, there were one up-regulated and four downregulated miRNAs in N-RA group (fold change ≥ 2 and P value < 0...
2023: PeerJ
https://read.qxmd.com/read/37347924/loss-of-circigf1r-suppresses-cardiomyocytes-proliferation-by-sponging-mir-362-5p
#3
JOURNAL ARTICLE
Jun-Hui Zeng, Hong-Ji Li, Kun Liu, Chi-Qian Liang, Hai-Yan Wu, Wu-Yun Chen, Ming-Hui Tang, Wan-Ling Zhao, Dong-Qing Cai, Xu-Feng Qi
Circular RNAs (circRNAs) are generally formed by the back-splicing of precursor mRNA. Increasing evidence implicates the important role of circRNAs in cardiovascular diseases. However, the role of circ-insulin-like growth factor 1 receptor ( circIGF1R ) in cardiomyocyte (CM) proliferation remains unclear. Here, we investigated the potential role of the circIGF1R in the proliferation of CMs. We found that circIGF1R expression in heart tissues and primary CMs from adult mice was significantly lower than that in neonatal mice at postnatal 1 day (p1)...
June 22, 2023: DNA and Cell Biology
https://read.qxmd.com/read/36745296/maternal-circulating-exosomal-mir-185-5p-levels-as-a-predictive-biomarker-in-patients-with-recurrent-pregnancy-loss
#4
JOURNAL ARTICLE
Yujing Xiong, Zheng Fang, Jie Dong, Shuqiang Chen, Jiaqin Mao, Wanlin Zhang, Li Hai, Jing Zhou, Xiaohong Wang
PURPOSE: The aim of this study was to explore the predictive role of microRNAs (miRNAs) from maternal serum exosomes in early recurrent pregnancy loss (RPL) and the related mechanism in early pregnancy. METHODS: Maternal serum was collected from pregnant women with RPL history or women with ongoing pregnancy (OP); serum exosomes were extracted and identified. Differentially expressed (DE) miRNAs in exosomes were screened by RNA sequencing and further validated by qRT-PCR...
February 6, 2023: Journal of Assisted Reproduction and Genetics
https://read.qxmd.com/read/36542208/circ-igf1r-affects-the-progression-of-colorectal-cancer-by-activating-the-mir-362-5p-hmgb3-mediated-wnt-%C3%AE-catenin-signal-pathway
#5
JOURNAL ARTICLE
Sheng Gao, Xiaodong Zhang, Wenqi Bai, Jian Wang, Bo Jiang
The aim of this study was to investigate the role of circRNA insulin growth factor 1 receptor (circ-IGF1R) in colorectal cancer (CRC). Glycolytic metabolism was analyzed by glucose uptake and lactate production using the corresponding kits. The protein levels were determined using Western blot. The effect of circ-IGF1R on CRC in vivo was explored by xenograft experiment in mice. Circ-IGF1R was up-regulated in CRC tissues and cells. Knockdown of circ-IGF1R inhibited proliferation, migration, invasion and glycolysis but induced apoptosis of CRC cells...
December 21, 2022: Biochemical Genetics
https://read.qxmd.com/read/36523183/mir-362-5p-inhibits-cartilage-repair-in-osteoarthritis-via-targeting-plexin-b1
#6
JOURNAL ARTICLE
Qian Li, Ping Xu, Chi Zhang, Yang Gao
BACKGROUND AND OBJECTIVES: Chondrogenesis of bone marrow mesenchymal stem cells (BMSCs) exerts great function during the pathogenesis of osteoarthritis (OA). Studies have reported the association of plexin B1 (PLXNB1) with OA pathogenesis. In this study, the upstream mechanism and function of PLXNB1 in this disease were explored. METHODS: Flow cytometry was applied to test BMSC characterization. Chondrogenic differentiation of BMSCs was evaluated by Alcian blue staining...
2022: Journal of Orthopaedic Surgery
https://read.qxmd.com/read/36047197/regulation-of-iron-ion-transporter-slc11a2-by-three-identical-mirnas
#7
JOURNAL ARTICLE
Yuta Sugino, Reina Uchiyama, Chihiro Shibasaki, Fumihiko Kugawa
Here, we searched for microRNAs (miRNAs) in silico that could interact with SLC11A2 mRNA, a solute carrier (SLC) iron-ion transporter, and investigated their effects on SLC11A2 gene expression using the cultured human colon carcinoma cell line, Caco-2. In silico analysis using the miRWalk2.0 database revealed that several types of miRNAs interact with the human SLC11A2 gene; we focused on three miRNAs, miR-149-5p, miR-362-5p, and miR-539-5p as candidates in this study. We first revealed that the three miRNAs interact with the SLC11A2 3'-untranslated region (3'-UTR) using a luciferase assay in a Caco-2 cell line...
2022: Biological & Pharmaceutical Bulletin
https://read.qxmd.com/read/36032099/the-potential-role-of-exosomal-mirnas-and-membrane-proteins-in-acute-hiv-infected-people
#8
JOURNAL ARTICLE
Xin Li, Wenjing Wang, Jing Chen, Bangxiang Xie, Shumin Luo, Dexi Chen, Chao Cai, Chuanyun Li, Weihua Li
Exosomes play an important role during human immunodeficiency virus (HIV) acute infection. Yet, information regarding its cargo and its association with HIV rapid progressors (RPs) and typical progressors (TPs) remain largely unknown. In this study, exosomal miRNAs sequencing and mass cytometry were used to identify differential exosomal miRNAs and membrane proteins that participate in the pathogenesis of TPs and RPs. We discovered that miR-144-5p, miR-1180-3p, miR-451a, miR-362-5p, and miR-625-5p are associated with the TPs and miR-362-5p with the RPs...
2022: Frontiers in Immunology
https://read.qxmd.com/read/35408969/micrornas-expression-in-response-to-rhngf-in-epithelial-corneal-cells-focus-on-neurotrophin-signaling-pathway
#9
JOURNAL ARTICLE
Chiara Compagnoni, Veronica Zelli, Andrea Bianchi, Antinisca Di Marco, Roberta Capelli, Davide Vecchiotti, Laura Brandolini, Anna Maria Cimini, Francesca Zazzeroni, Marcello Allegretti, Edoardo Alesse, Alessandra Tessitore
PURPOSE: Nerve growth factor efficacy was demonstrated for corneal lesions treatment, and recombinant human NGF (rhNGF) was approved for neurotrophic keratitis therapy. However, NGF-induced molecular responses in cornea are still largely unknown. We analyzed microRNAs expression in human epithelial corneal cells after time-dependent rhNGF treatment. METHODS: Nearly 700 microRNAs were analyzed by qRT-PCR. MicroRNAs showing significant expression differences were examined by DIANA-miRpath v...
March 25, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/35379251/retraction-note-mir-362-5p-promotes-the-malignancy-of-chronic-myelocytic-leukaemia-via-downregulation-of-gadd45%C3%AE
#10
Peng Yang, Fang Ni, Rui-Qing Deng, Guo Qiang, Hua Zhao, Ming-Zhen Yang, Xin-Yi Wang, You-Zhi Xu, Li Chen, Dan-Lei Chen, Zhi-Jun Chen, Li-Xin Kan, Si-Ying Wang
No abstract text is available yet for this article.
April 4, 2022: Molecular Cancer
https://read.qxmd.com/read/35365168/circzdbf2-up-regulates-rnf145-by-cerna-model-and-recruits-cebpb-to-accelerate-oral-squamous-cell-carcinoma-progression-via-nf%C3%AE%C2%BAb-signaling-pathway
#11
JOURNAL ARTICLE
Liang Rong, Bo Chen, Ke Liu, Bingyao Liu, Xinyao He, Juan Liu, Junxia Li, Maodian He, Lei Zhu, Ke Liu, Xiaolei Shi, Yi Shuai, Lei Jin
BACKGROUND: Oral squamous cell carcinoma (OSCC), as one of the commonest malignancies showing poor prognosis, has been increasingly suggested to be modulated by circular RNAs (circRNAs). Through GEO (Gene Expression Omnibus) database, a circRNA derived from ZDBF2 (circZDBF2) was uncovered to be with high expression in OSCC tissues, while how it may function in OSCC remains unclear. METHODS: CircZDBF2 expression was firstly verified in OSCC cells via qRT-PCR. CCK-8, along with colony formation, wound healing, transwell and western blot assays was performed to assess the malignant cell behaviors in OSCC cells...
April 1, 2022: Journal of Translational Medicine
https://read.qxmd.com/read/34727290/alteration-of-mir-362-5p-and-mir-454-3p-expression-elicits-diverse-responses-in-breast-cancer-cell-lines
#12
JOURNAL ARTICLE
Raghu Aarthy, Arunagiri Kuha Deva Magendhra Rao, Krishna Patel, Velusami Sridevi, Thangarajan Rajkumar, Harsha Gowda, Samson Mani
BACKGROUND: The heterogeneity of breast tumors presents a challenge in disease management, necessitating an understanding of the molecular mechanisms driving breast tumorigenesis. Aberrant expression of microRNAs is known to promote tumor growth and progression. Our previous RNA-sequencing dataset revealed the upregulation of miR-362-5p and miR-454-3p in breast tumors. We investigated potential role of miR-362-5p and miR-454-3p in breast cancer using MDAMB231 and MCF7 cell lines. METHODS AND RESULTS: The expression of miR-362-5p and miR-454-3p were altered in MCF7 and MDAMB231 using mimics and inhibitors...
January 2022: Molecular Biology Reports
https://read.qxmd.com/read/34120636/positive-natural-selection-of-n6-methyladenosine-on-the-rnas-of-processed-pseudogenes
#13
JOURNAL ARTICLE
Liqiang Tan, Weisheng Cheng, Fang Liu, Dan Ohtan Wang, Linwei Wu, Nan Cao, Jinkai Wang
BACKGROUND: Canonical nonsense-mediated decay (NMD) is an important splicing-dependent process for mRNA surveillance in mammals. However, processed pseudogenes are not able to trigger NMD due to their lack of introns. It is largely unknown whether they have evolved other surveillance mechanisms. RESULTS: Here, we find that the RNAs of pseudogenes, especially processed pseudogenes, have dramatically higher m6 A levels than their cognate protein-coding genes, associated with de novo m6 A peaks and motifs in human cells...
June 13, 2021: Genome Biology
https://read.qxmd.com/read/34107852/microrna-362-5p-promotes-the-proliferation-and-inhibits-apoptosis-of-trophoblast-cells-via-targeting-glutathione-disulfide-reductase
#14
JOURNAL ARTICLE
Cuihua Zhang, Dan Zhao
Gestational diabetes mellitus (GDM), a common complication of pregnancy, harms the health of pregnant women and fetuses. MicroRNAs (miRNAs) dysregulation in placenta is involved in GDM. Herein, we explored the roles of miR-362-5p in GDM. After high glucose (HG) treated HTR-8/SVneo cells, CCK-8 and flow cytometry were conducted to assess the capability of the proliferation and apoptosis, respectively. The data demonstrated that HG inhibited proliferation and induced apoptosis of HTR-8/SVneo cells. MiR-362-5p level was reduced in HG-treated cells and placenta tissues of GDM patients, measured by qPCR...
December 2021: Bioengineered
https://read.qxmd.com/read/33962174/a-two-mirna-signature-of-upregulated-mir-185-5p-and-mir-362-5p-as-a-blood-biomarker-for-breast-cancer
#15
JOURNAL ARTICLE
Kai Zhang, Yan-Yan Wang, Yao Xu, Li Zhang, Jiang Zhu, Peng-Chao Si, Ya-Wen Wang, Rong Ma
BACKGROUND: Differentially expressed microRNAs (miRNAs) in the blood of breast cancer patients may serve as diagnostic biomarkers. METHODS: In this study, miRNA microarray of the blood of breast cancer patients and healthy controls was performed. Candidate differentially expressed miRNAs were further verified by real-time polymerase chain reaction in 68 breast cancer patients and 13 healthy controls. RESULTS: Six upregulated blood miRNAs (miR-26b-5p, miR-106b-5p, miR-142-3p, miR-142-5p, miR-185-5p, and miR-362-5p) were identified in breast cancer patients...
April 29, 2021: Pathology, Research and Practice
https://read.qxmd.com/read/33833527/lncrna-lhfpl3-as1-promotes-oral-squamous-cell-carcinoma-growth-and-cisplatin-resistance-through-targeting-mir-362-5p-chsy1-pathway
#16
JOURNAL ARTICLE
Jiandong Li, Xiaohu Xu, Dandan Zhang, Han Lv, Xin Lei
Background: Oral squamous cell carcinoma (OSCC) is a common oral cancer. The current study aims to elucidate the potential roles of long noncoding RNA (lncRNA) LHFPL3-AS1 in OSCC development. Methods: Gene expression was measured by qRT-PCR in tumor tissues and cell lines. Loss-of-function assays were performed to analyze the effects of LHFPL3-AS1 on malignant behaviors. Bioinformatics analysis was conducted to explore the downstream signaling pathway of LHFPL3-AS1 in OSCC...
2021: OncoTargets and Therapy
https://read.qxmd.com/read/33746597/microrna-362-negatively-and-positively-regulates-smad4-expression-in-tgf-%C3%AE-smad-signaling-to-suppress-cell-migration-and-invasion
#17
JOURNAL ARTICLE
Han Ping Cheng, Chiu-Jung Huang, Ming-Long Tsai, Hooi Tin Ong, Soon Keng Cheong, Kong Bung Choo, Shih-Hwa Chiou
Cell migration and invasion are modulated by epithelial-to-mesenchymal transition (EMT) and the reverse MET process. Despite the detection of microRNA-362 (miR-362, both the miR-362-5p and -3p species) in cancers, none of the identified miR-362 targets is a mesenchymal or epithelial factor to link miR-362 with EMT/MET and metastasis. Focusing on the TGF-β/SMAD signaling pathway in this work, luciferase assays and western blot data showed that miR-362 targeted and negatively regulated expression of SMAD4 and E-cadherin, but not SNAI1, which is regulated by SMAD4...
2021: International Journal of Medical Sciences
https://read.qxmd.com/read/33679405/blood-microrna-signatures-serve-as-potential-diagnostic-biomarkers-for-hepatic-sinusoidal-obstruction-syndrome-caused-by-gynura-japonica-containing-pyrrolizidine-alkaloids
#18
JOURNAL ARTICLE
Xunjiang Wang, Wei Zhang, Yongfeng Yang, Yiran Chen, Yuzheng Zhuge, Aizhen Xiong, Li Yang, Zhengtao Wang
Background and Aims: The Gynura japonica -induced hepatic sinusoidal obstruction syndrome (HSOS) is closely related to pyrrolizidine alkaloids (PAs), and its prevalence has been increasing worldwide in recent years. However, no effective therapy for PA-induced HSOS in clinics is available, partially due to the failure of quick diagnosis. This study aims to identify blood microRNA (miRNA) signatures as potential biomarkers for PA-induced HSOS in clinics. Methods: The microarray-based miRNA profiling was performed on blood samples of the discovery cohort, which consisted of nine patients with HSOS and nine healthy donors...
2021: Frontiers in Pharmacology
https://read.qxmd.com/read/33635749/silencing-of-circular-rna-circpde5a-suppresses-neuroblastoma-progression-by-targeting-the-mir-362-5p-nol4l-axis
#19
JOURNAL ARTICLE
Yongcun Chen, Liangfeng Lin, Xiaohao Hu, Qiaoyu Li, Min Wu
Objective: Neuroblastoma (NB) is the most common extra-cranial solid tumor in early childhood. Circular RNAs (circRNAs) have been implicated in the development of NB. The purpose of the current study was to explore the molecular action of circRNA phosphodiesterase 5A (circPDE5A) in NB malignant progression. Materials and methods: The expression levels of circPDE5A, miR-362-5p and nucleolar protein 4 like (NOL4L) were assessed by quantitative real-time polymerase chain reaction (qRT-PCR) and western blot. Cell proliferation was detected by 3-(4, 5-dimethylthiazol-2-yl)-2, 5-diphenyl-2H-tetrazolium bromide (MTS) assay...
February 26, 2021: International Journal of Neuroscience
https://read.qxmd.com/read/33278902/identification-and-validation-of-endogenous-control-mirnas-in-plasma-samples-for-normalization-of-qpcr-data-for-alzheimer-s-disease
#20
JOURNAL ARTICLE
F Dakterzada, A Targa, I D Benítez, L Romero-ElKhayat, D de Gonzalo-Calvo, G Torres, A Moncusí-Moix, R Huerto, M Sánchez-de-la-Torre, F Barbé, G Piñol-Ripoll
BACKGROUND: MicroRNAs (miRNAs) are noncoding RNAs that are highly relevant as disease biomarkers. Several studies that explored the role of miRNAs in Alzheimer's disease (AD) demonstrated their usefulness in clinical identification. Nevertheless, miRNAs that may act as endogenous controls (ECs) have not yet been established. The identification of ECs would contribute to the standardization of these biomarkers in AD. The objective of the study was to identify miRNAs that can be used as ECs in AD...
December 5, 2020: Alzheimer's Research & Therapy
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