keyword
https://read.qxmd.com/read/34791208/analysis-of-independent-cohorts-of-outbred-cfw-mice-reveals-novel-loci-for-behavioral-and-physiological-traits-and-identifies-factors-determining-reproducibility
#21
JOURNAL ARTICLE
Jennifer Zou, Shyam Gopalakrishnan, Clarissa C Parker, Jerome Nicod, Richard Mott, Na Cai, Arimantas Lionikas, Robert W Davies, Abraham A Palmer, Jonathan Flint
Combining samples for genetic association is standard practice in human genetic analysis of complex traits, but is rarely undertaken in rodent genetics. Here, using 23 phenotypes and genotypes from two independent laboratories, we obtained a sample size of 3076 commercially available outbred mice and identified 70 loci, more than double the number of loci identified in the component studies. Fine-mapping in the combined sample reduced the number of likely causal variants, with a median reduction in set size of 51%, and indicated novel gene associations, including Pnpo, Ttll6, and GM11545 with bone mineral density, and Psmb9 with weight...
January 4, 2022: G3: Genes—Genomes—Genetics
https://read.qxmd.com/read/34769443/characterization-of-novel-pathogenic-variants-causing-pyridox-am-ine-5-phosphate-oxidase-dependent-epilepsy
#22
JOURNAL ARTICLE
Anna Barile, Philippa Mills, Martino L di Salvo, Claudio Graziani, Victoria Bunik, Peter Clayton, Roberto Contestabile, Angela Tramonti
Several variants of the enzyme pyridox(am)ine 5'-phosphate oxidase (PNPO), responsible for a rare form of vitamin B6 -dependent neonatal epileptic encephalopathy known as PNPO deficiency (PNPOD), have been reported. However, only a few of them have been characterised with respect to their structural and functional properties, despite the fact that the knowledge of how variants affect the enzyme may clarify the disease mechanism and improve treatment. Here, we report the characterisation of the catalytic, allosteric and structural properties of recombinantly expressed D33V, R161C, P213S, and E50K variants, among which D33V (present in approximately 10% of affected patients) is one of the more common variants responsible for PNPOD...
November 6, 2021: International Journal of Molecular Sciences
https://read.qxmd.com/read/34316313/treatable-cause-of-refractory-seizures-in-an-infant-with-a-novel-mutation
#23
Ruchi R Mittal, Ranjith Kumar Manokaran, Saji James
Pyridoxine-dependent epilepsy is a treatable cause of epilepsy, which is very well known. It is most commonly caused by mutations in ALDH7A1 and PNPO genes. A 5-month-old infant presented with refractory seizures. Magnetic resonance imaging (MRI) brain was normal. Clinical exome sequencing showed a novel mutation in PROSC gene. He responded very well to pyridoxine and has been seizure free since the beginning of the treatment. PROSC gene mutations have been recently described as a cause for pyridoxine-dependent epilepsy...
January 2021: Journal of Pediatric Neurosciences
https://read.qxmd.com/read/34083748/phenotypic-analysis-of-catastrophic-childhood-epilepsy-genes
#24
JOURNAL ARTICLE
Aliesha Griffin, Colleen Carpenter, Jing Liu, Rosalia Paterno, Brian Grone, Kyla Hamling, Maia Moog, Matthew T Dinday, Francisco Figueroa, Mana Anvar, Chinwendu Ononuju, Tony Qu, Scott C Baraban
Genetic engineering techniques have contributed to the now widespread use of zebrafish to investigate gene function, but zebrafish-based human disease studies, and particularly for neurological disorders, are limited. Here we used CRISPR-Cas9 to generate 40 single-gene mutant zebrafish lines representing catastrophic childhood epilepsies. We evaluated larval phenotypes using electrophysiological, behavioral, neuro-anatomical, survival and pharmacological assays. Local field potential recordings (LFP) were used to screen ∼3300 larvae...
June 3, 2021: Communications Biology
https://read.qxmd.com/read/34019876/identification-and-characterization-of-the-pyridoxal-5-phosphate-allosteric-site-in-escherichia-coli-pyridoxine-5-phosphate-oxidase
#25
JOURNAL ARTICLE
Anna Barile, Theo Battista, Annarita Fiorillo, Martino Luigi di Salvo, Francesco Malatesta, Angela Tramonti, Andrea Ilari, Roberto Contestabile
Pyridoxal 5'-phosphate (PLP), the catalytically active form of vitamin B6 , plays a pivotal role in metabolism as an enzyme cofactor. PLP is a very reactive molecule and can be very toxic unless its intracellular concentration is finely regulated. In Escherichia coli, PLP formation is catalyzed by pyridoxine 5'-phosphate oxidase (PNPO), a homodimeric FMN-dependent enzyme that is responsible for the last step of PLP biosynthesis and is also involved in the PLP salvage pathway. We have recently observed that E...
January 2021: Journal of Biological Chemistry
https://read.qxmd.com/read/33981986/complexities-of-pyridoxine-response-in-pnpo-deficiency
#26
JOURNAL ARTICLE
Rajni Farmania, Ankit Gupta, Kumar Ankur, Sanjeev Chetry, Suvasini Sharma
Pyridox(am)ine- 5- phosphate Oxidase deficiency (PNPO) is a rare cause of neonatal metabolic encephalopathy associated with refractory status epilepticus. We report a case of a premature neonate presenting with drug-resistant seizures beginning at 2 hours of life. The baby showed initial transient response to pyridoxine followed by recurrence. Genetic report confirmed the diagnosis of PNPO deficiency. A literature review on phenotypic variants in terms of response to pyridoxine is also presented along with a proposed algorithm to manage a case of suspected vitamin responsive epilepsy...
2021: Epilepsy & behavior reports
https://read.qxmd.com/read/33748042/west-syndrome-is-an-exceptional-presentation-of-pyridoxine-and-pyridoxal-phosphate-dependent-epilepsy-data-from-a-french-cohort-and-review-of-the-literature
#27
JOURNAL ARTICLE
Marc Gibaud, Magalie Barth, Jérémie Lefranc, Karine Mention, Nathalie Villeneuve, Manuel Schiff, Hélène Maurey, Marie-Anne Barthez, Isabelle Caubel, Mondher Chouchane, Diane Doummar, Manoëlle Kossorotoff, Marie-Dominique Lamblin, Agathe Roubertie, Rima Nabbout, Patrick Van Bogaert
Objective: To characterize the electro-clinical presentation of patients with pyridoxine-dependent epilepsy (PDE) and pyridoxal phosphate (PLP)-dependent epilepsy in order to determine whether some of them could be diagnosed as de novo West syndrome, i. e., West syndrome that starts after the age of 2 months without other types of seizures (focal seizures for instance) before the onset of epileptic spasms. Methods: We analyzed data from an unpublished cohort of 28 genetically confirmed cases of PDE with antiquitine (ATQ) deficiency and performed a review of the literature looking for description of West syndrome in patients with either PDE with ATQ deficiency or PLP-dependent epilepsy with Pyridox(am)ine phosphate oxidase (PNPO) deficiency...
2021: Frontiers in Pediatrics
https://read.qxmd.com/read/33728241/early-onset-vitamin-b-6-dependent-epilepsy-due-to-pathogenic-plpbp-variants-in-a-premature-infant-a-case-report-and-review-of-the-literature
#28
Oliver Heath, James Pitt, Simone Mandelstam, Carl Kuschel, Anand Vasudevan, Sarah Donoghue
Vitamin B6 -dependent epilepsies are a heterogeneous group of disorders characterized by decreased availability of the active cofactor pyridoxal-5'-phosphate (PLP). While pathogenic variants in ALDH7A1 or PNPO genes account for most cases of these disorders, biallelic pathogenic variants in PLPBP have been shown to cause a form of early onset vitamin B6 -dependent epilepsy (EPVB6D). PLPBP is thought to play a role in the homeostatic regulation of vitamin B6 , by supplying PLP to apoenzymes while limiting side-reaction toxicity related to excess unbound PLP...
March 2021: JIMD Reports
https://read.qxmd.com/read/33425341/vitamin-b6-dependent-epilepsy-due-to-pyridoxal-phosphate-binding-protein-plpbp-defect-first-case-report-from-pakistan-and-review-of-literature
#29
Sibtain Ahmed, Ralph J DeBerardinis, Min Ni, Bushra Afroze
INTRODUCTION: The Vitamin B6-dependent epilepsies are a heterogeneous group of autosomal recessive disorders usually characterized by neonatal onset seizures responsive to treatment with vitamin B6 available as pyridoxine (PN) or as the biologically active form pyridoxal 5-phosphate (PLP). The vitamin B6-dependent epilepsies are caused by mutations in at least five different genes involved in B6 metabolism. A literature review revealed that only 30 patients with vitamin B6-dependent epilepsy caused by PLPBP mutation have been reported worldwide...
December 2020: Annals of Medicine and Surgery
https://read.qxmd.com/read/33421502/inborn-errors-in-the-vitamin-b6-salvage-enzymes-associated-with-neonatal-epileptic-encephalopathy-and-other-pathologies
#30
REVIEW
Mohini S Ghatge, Mohammed Al Mughram, Abdelsattar M Omar, Martin K Safo
Pyridoxal 5'-phosphate (PLP), the active cofactor form of vitamin B6 is required by over 160 PLP-dependent (vitamin B6) enzymes serving diverse biological roles, such as carbohydrates, amino acids, hemes, and neurotransmitters metabolism. Three key enzymes, pyridoxal kinase (PL kinase), pyridoxine 5'-phosphate oxidase (PNPO), and phosphatases metabolize and supply PLP to PLP-dependent enzymes through the salvage pathway. In born errors in the salvage enzymes are known to cause inadequate levels of PLP in the cell, particularly in neuronal cells...
April 2021: Biochimie
https://read.qxmd.com/read/32913027/teaching-video-neuroimages-atypical-abnormal-eye-movements-in-pnpo-related-epilepsy
#31
JOURNAL ARTICLE
Sara Pavitt, Amanda G Sandoval Karamian, Gaurav Chattree, Jenna Klotz, Shannon Beres
No abstract text is available yet for this article.
April 6, 2021: Neurology
https://read.qxmd.com/read/32888189/phenotypic-and-molecular-spectrum-of-pyridoxamine-5-phosphate-oxidase-deficiency-a-scoping-review-of-87-cases-of-pyridoxamine-5-phosphate-oxidase-deficiency
#32
REVIEW
Malak Alghamdi, Fahad A Bashiri, Marwa Abdelhakim, Nouran Adly, Dima Z Jamjoom, Khalid M Sumaily, Bandar Alghanem, Stefan T Arold
Pyridoxamine-5'-phosphate oxidase (PNPO) deficiency is an autosomal recessive pyridoxal 5'-phosphate (PLP)-vitamin-responsive epileptic encephalopathy. The emerging feature of PNPO deficiency is the occurrence of refractory seizures in the first year of life. Pre-maturity and fetal distress, combined with neonatal seizures, are other associated key characteristics. The phenotype results from a dependency of PLP which regulates several enzymes in the body. We present the phenotypic and genotypic spectrum of (PNPO) deficiency based on a literature review (2002-2020) of reports (n = 33) of patients with confirmed PNPO deficiency (n = 87)...
January 2021: Clinical Genetics
https://read.qxmd.com/read/32803525/nephrotoxicity-profile-of-cadmium-revealed-by-proteomics-in-mouse-kidney
#33
JOURNAL ARTICLE
Xi Sun, Yanwei Wang, Tingya Jiang, Xiao Yuan, Zhen Ren, Alex Tuffour, Haitao Liu, Yang Zhou, Jie Gu, Haifeng Shi
Cadmium (Cd) is a highly toxic metal and kidney is its main target. However, the molecular effects and associated potential impacts of Cd-accumulated kidney have not been well investigated. In this study, mouse was used as a model to investigate the Cd-induced proteomic profile change in kidney, and a total of 34 differentially expressed proteins were detected by two-dimensional gel electrophoresis (2-DE) and further identified by matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF-MS)...
May 2021: Biological Trace Element Research
https://read.qxmd.com/read/32788630/molecular-characterization-of-pyridoxine-5-phosphate-oxidase-and-its-pathogenic-forms-associated-with-neonatal-epileptic-encephalopathy
#34
JOURNAL ARTICLE
Anna Barile, Isabel Nogués, Martino L di Salvo, Victoria Bunik, Roberto Contestabile, Angela Tramonti
Defects of vitamin B6 metabolism are responsible for severe neurological disorders, such as pyridoxamine 5'-phosphate oxidase deficiency (PNPOD; OMIM: 610090), an autosomal recessive inborn error of metabolism that usually manifests with neonatal-onset severe seizures and subsequent encephalopathy. At present, 27 pathogenic mutations of the gene encoding human PNPO are known, 13 of which are homozygous missense mutations; however, only 3 of them have been characterised with respect to the molecular and functional properties of the variant enzyme forms...
August 12, 2020: Scientific Reports
https://read.qxmd.com/read/32523542/regulation-of-myofilament-contractile-function-in-human-donor-and-failing-hearts
#35
JOURNAL ARTICLE
Kerry S McDonald, Laurin M Hanft, Joel C Robinett, Maya Guglin, Kenneth S Campbell
Heart failure (HF) often includes changes in myocardial contractile function. This study addressed the myofibrillar basis for contractile dysfunction in failing human myocardium. Regulation of contractile properties was measured in cardiac myocyte preparations isolated from frozen, left ventricular mid-wall biopsies of donor ( n = 7) and failing human hearts ( n = 8). Permeabilized cardiac myocyte preparations were attached between a force transducer and a position motor, and both the Ca2+ dependence and sarcomere length (SL) dependence of force, rate of force, loaded shortening, and power output were measured at 15 ± 1°C...
2020: Frontiers in Physiology
https://read.qxmd.com/read/32191440/enhancing-chain-initiation-efficiency-in-the-cationic-allyl-nickel-catalyzed-co-polymerization-of-ethylene-and-methyl-acrylate
#36
JOURNAL ARTICLE
Mengli Xu, Fan Yu, Pei Li, Guoyong Xu, Shaojie Zhang, Fuzhou Wang
Improving the efficiency of chain initiation is highly important and also highly challenging in the development of olefin polymerization catalysts. A series of 2-methylallyl-based nickel complexes supported by aryl- N -bridged diphosphazane monoxide (PNPO) ligands containing different electronic and steric substituents were prepared and characterized. These nickel complexes are highly active single-component catalysts for ethylene polymerization and copolymerization with methyl acrylate (MA). 2-Methylallyl substituent on the μ- allyl catalysts led to an increase in the efficiency of chain initiation compared with the corresponding allyl-based analogues, improving the catalytic performances with high activity (up to 4...
March 19, 2020: Inorganic Chemistry
https://read.qxmd.com/read/31759955/pyridox-am-ine-5-phosphate-oxidase-pnpo-deficiency-in-zebrafish-results-in-fatal-seizures-and-metabolic-aberrations
#37
JOURNAL ARTICLE
Jolita Ciapaite, Monique Albersen, Sanne M C Savelberg, Marjolein Bosma, Federico Tessadori, Johan Gerrits, Nico Lansu, Susan Zwakenberg, Jeroen P W Bakkers, Fried J T Zwartkruis, Gijs van Haaften, Judith J Jans, Nanda M Verhoeven-Duif
Pyridox(am)ine 5'-phosphate oxidase (PNPO) catalyzes oxidation of pyridoxine 5'-phosphate (PNP) and pyridoxamine 5'-phosphate (PMP) to pyridoxal 5'-phosphate (PLP), the active form of vitamin B6 . PNPO deficiency results in neonatal/infantile seizures and neurodevelopmental delay. To gain insight into this disorder we generated Pnpo deficient (pnpo-/- ) zebrafish (CRISPR/Cas9 gene editing). Locomotion analysis showed that pnpo-/- zebrafish develop seizures resulting in only 38% of pnpo-/- zebrafish surviving beyond 20 days post fertilization (dpf)...
March 1, 2020: Biochimica et Biophysica Acta. Molecular Basis of Disease
https://read.qxmd.com/read/31741821/diagnostic-pitfalls-in-vitamin-b6-dependent-epilepsy-caused-by-mutations-in-the-plpbp-gene
#38
Kristian Vestergaard Jensen, Maria Frid, Tommy Stödberg, Michela Barbaro, Anna Wedell, Mette Christensen, Mads Bak, Jakob Ek, Camilla Gøbel Madsen, Niklas Darin, Sabine Grønborg
Vitamin B6-responsive epilepsies are a group of genetic disorders including ALDH7A1 deficiency, PNPO deficiency, and others, usually causing neonatal onset seizures resistant to treatment with common antiepileptic drugs. Recently, biallelic mutations in PLPBP were shown to be a novel cause of vitamin B6-dependent epilepsy with a variable phenotype. The different vitamin B6-responsive epilepsies can be detected and distinguished by their respective biomarkers and genetic analysis. Unfortunately, metabolic biomarkers for early detection and prognosis of PLPBP deficiency are currently still lacking...
November 2019: JIMD Reports
https://read.qxmd.com/read/31657440/pyridoxamine-phosphate-oxidases-and-pyridoxamine-phosphate-oxidase-related-proteins-catalyze-the-oxidation-of-6-nad-p-h-to-nad-p
#39
JOURNAL ARTICLE
Alexandre Y Marbaix, Georges Chehade, Gaëtane Noël, Pierre Morsomme, Didier Vertommen, Guido T Bommer, Emile Van Schaftingen
6-NADH and 6-NADPH are strong inhibitors of several dehydrogenases that may form spontaneously from NAD(P)H. They are known to be oxidized to NAD(P)+ by mammalian renalase, an FAD-linked enzyme mainly present in heart and kidney, and by related bacterial enzymes. We partially purified an enzyme oxidizing 6-NADPH from rat liver, and, surprisingly, identified it as pyridoxamine-phosphate oxidase (PNPO). This was confirmed by the finding that recombinant mouse PNPO oxidized 6-NADH and 6-NADPH with catalytic efficiencies comparable to those observed with pyridoxine- and pyridoxamine-5'-phosphate...
October 30, 2019: Biochemical Journal
https://read.qxmd.com/read/31641590/assessing-the-genetic-association-between-vitamin-b6-metabolism-and-genetic-generalized-epilepsy
#40
JOURNAL ARTICLE
Remi Stevelink, Faith Pangilinan, Floor E Jansen, Kees P J Braun, Anne M Molloy, Lawrence C Brody, Bobby P C Koeleman
Altered vitamin B6 metabolism due to pathogenic variants in the gene PNPO causes early onset epileptic encephalopathy, which can be treated with high doses of vitamin B6. We recently reported that single nucleotide polymorphisms (SNPs) that influence PNPO expression in the brain are associated with genetic generalized epilepsy (GGE). However, it is not known whether any of these GGE-associated SNPs influence vitamin B6 metabolite levels. Such an influence would suggest that vitamin B6 could play a role in GGE therapy...
December 2019: Molecular Genetics and Metabolism Reports
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