keyword
https://read.qxmd.com/read/38652893/quantification-of-microrna-in-a-single-living-cell-via-ionic-current-rectification-based-nanopore-for-triple-negative-breast-cancer-diagnosis
#1
JOURNAL ARTICLE
Shujie Zhang, Laibo Song, Ruina Zheng, Fang Zhang, Qimeng Wang, Xiaosui Mao, Jin-Xuan Fan, Bo Liu, Yuan-Di Zhao, Wei Chen
Accurate analysis of microRNAs (miRNAs) at the single-cell level is extremely important for deeply understanding their multiple and intricate biological functions. Despite some advancements in analyzing single-cell miRNAs, challenges such as intracellular interferences and insufficient detection limits still remain. In this work, an ultrasensitive nanopore sensor for quantitative single-cell miRNA-155 detection is constructed based on ionic current rectification (ICR) coupled with enzyme-free catalytic hairpin assembly (CHA)...
April 23, 2024: Analytical Chemistry
https://read.qxmd.com/read/38652738/rapid-screening-of-new-psychoactive-substances-using-pdart-qqq-ms
#2
JOURNAL ARTICLE
Wei-Hsin Hsu, Kai-Wen Cheng, Tzu-Hsuan Feng, Ju-Yu Chen, Guan-Yuan Chen, Lian-Yu Chen, Te I Weng, Cheng-Chih Hsu
Drug abuse is a severe social problem worldwide. Particularly, the issue of new psychoactive substances (NPSs) have increasingly emerged. NPSs are structural or functional analogs of traditional illicit drugs, such as cocaine, cannabis, and amphetamine; these molecules provide the same or more severe neurological effects. Usually, immunoassays are utilized in the preliminary screening method. However, NPSs have poor detectability in commercially available immunoassay kits. Meanwhile, various chromatography combined with the mass spectrometry platform have been developed to quantify NPSs...
April 23, 2024: Journal of the American Society for Mass Spectrometry
https://read.qxmd.com/read/38652734/gaussian-accelerated-molecular-dynamics-simulations-facilitate-prediction-of-the-permeability-of-cyclic-peptides
#3
JOURNAL ARTICLE
Nicolas Frazee, Kyle R Billlings, Blake Mertz
Despite their widespread use as therapeutics, clinical development of small molecule drugs remains challenging. Among the many parameters that undergo optimization during the drug development process, increasing passive cell permeability (i.e., log(P)) can have some of the largest impact on potency. Cyclic peptides (CPs) have emerged as a viable alternative to small molecules, as they retain many of the advantages of small molecules (oral availability, target specificity) while being highly effective at traversing the plasma membrane...
2024: PloS One
https://read.qxmd.com/read/38652546/threonine-dehydrogenase-regulates-neutrophil-homeostasis-but-not-h3k4me3-levels-in-zebrafish
#4
JOURNAL ARTICLE
Ning-Zhe Li, Zi-Xuan Wang, Fan Zhang, Chang-Zhou Feng, Yi Chen, Dian-Jia Liu, Shu-Bei Chen, Yi Jin, Yuan-Liang Zhang, Yin-Yin Xie, Qiu-Hua Huang, Lan Wang, Bing Li, Xiao-Jian Sun
l-threonine dehydrogenase (Tdh) is an enzyme that links threonine metabolism to epigenetic modifications and mitochondria biogenesis. In vitro studies show that it is critical for the regulation of trimethylation of histone H3 lysine 4 (H3K4me3) levels and cell fate determination of mouse embryonic stem cells (mESCs). However, whether Tdh regulates a developmental process in vivo and, if it does, whether it also primarily regulates H3K4me3 levels in this process as it does in mESCs, remains elusive. Here, we revealed that, in zebrafish hematopoiesis, tdh is preferentially expressed in neutrophils...
April 23, 2024: FEBS Journal
https://read.qxmd.com/read/38652428/mycosporine-like-amino-acids-as-a-potential-inhibitor-of-tyrosinase-related-protein-1-computational-screening-pharmacokinetics-and-molecular-dynamics-simulation
#5
JOURNAL ARTICLE
Nasreen Amin, Vinay K Singh, Vinod K Kannaujiya
Melanin is the major pigment responsible for the coloring of mammalian skin, hair, and eyes to defend against ultraviolet radiation. However, excessive melanin production has resulted in numerous types of hyperpigmentation disorders. Tyrosinase-related protein 1 (TYRP1) is a transmembrane glycoprotein enzyme found in many organisms, including humans, that plays an important role in melanogenesis. Thus, controlling the enzyme activity of TYRP1 with tyrosinase inhibitors is a vital step in the treatment of hyperpigmentation problems in humans...
April 23, 2024: Molecular Biotechnology
https://read.qxmd.com/read/38652417/in-vitro-activity-of-cefiderocol-against-carbapenem-resistant-acinetobacter-baumannii-carrying-various-%C3%AE-lactamase-encoding-genes
#6
JOURNAL ARTICLE
Aylin Uskudar-Guclu, Salih Danyildiz, Hasan Cenk Mirza, Mehtap Akcil Ok, Ahmet Basustaoglu
OBJECTIVES: This study aimed to determine the in vitro efficacy of cefiderocol in carbapenem-resistant Acinetobacter baumannii (CRAB) isolates and evaluate the disk-diffusion (DD) method as an alternative method to broth-microdilution (BMD). METHODS: Totally 89 CRAB isolates were included. Cluster analysis was determined by Pulsed-Field Gel Electrophoresis (PFGE). Resistance genes; blaOXA-51 , blaOXA-23 , blaOXA-24 , blaOXA-58, blaPER-1 , blaNDM , blaIMP and mcr-1 were screened...
April 23, 2024: European Journal of Clinical Microbiology & Infectious Diseases
https://read.qxmd.com/read/38652365/repositioning-of-anti-infective-compounds-against-monkeypox-virus-core-cysteine-proteinase-a-molecular-dynamics-study
#7
JOURNAL ARTICLE
Ali A Rabaan, Fatimah S Alshahrani, Mohammed Garout, Mohammed Alissa, Mutaib M Mashraqi, Ahmad A Alshehri, Abdulmonem A Alsaleh, Sara Alwarthan, Amal A Sabour, Amal H Alfaraj, Bashayer M AlShehail, Nouf Alotaibi, Wesam A Abduljabbar, Mohammed Aljeldah, Jeehan H Alestad
Monkeypox virus (MPXV) core cysteine proteinase (CCP) is one of the major drug targets used to examine the inhibitory action of chemical moieties. In this study, an in silico technique was applied to screen 1395 anti-infective compounds to find out the potential molecules against the MPXV-CCP. The top five hits were selected after screening and processed for exhaustive docking based on the docked score of ≤ -9.5 kcal/mol. Later, the top three hits based on the exhaustive-docking score and interaction profile were selected to perform MD simulations...
April 23, 2024: Molecular Diversity
https://read.qxmd.com/read/38652227/brazilin-actuates-ferroptosis-in-breast-cancer-cells-via-p53-slc7a11-gpx4-signaling-pathway
#8
JOURNAL ARTICLE
Dan He, Xiao-Ning Tan, Lin-Pei Li, Wen-Hui Gao, Xue-Fei Tian, Pu-Hua Zeng
OBJECTIVE: To investigate the mechanism of induction of ferroptosis by brazilin in breast cancer cells. METHODS: Breast cancer 4T1 cells were divided into 6 groups: control, brazilin 1/2 half maximal inhibitory concentration (IC50 ), IC50 , 2×IC50 , erastin (10 µg/mL) and capecitabine (10 µg/mL) groups. The effect of brazilin on the proliferation of 4T1 cells was detected by cell counting kit-8 assay, and the treatment dose of brazilin was screened...
April 23, 2024: Chinese Journal of Integrative Medicine
https://read.qxmd.com/read/38651929/azole-resistance-mechanisms-and-population-structure-of-the-human-pathogen-aspergillus-fumigatus-on-retail-plant-products
#9
JOURNAL ARTICLE
Caroline Wang, Natalie Miller, Douglas Vines, Paul M Severns, Michelle Momany, Marin T Brewer
Aspergillus fumigatus is a ubiquitous saprotroph and human-pathogenic fungus that is life-threatening to the immunocompromised. Triazole-resistant A. fumigatus was found in patients without prior treatment with azoles, leading researchers to conclude that resistance had developed in agricultural environments where azoles are used against plant pathogens. Previous studies have documented azole-resistant A. fumigatus across agricultural environments, but few have looked at retail plant products. Our objectives were to determine if azole-resistant A...
April 23, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38651760/top-advances-of-the-year-cervical-cancer
#10
JOURNAL ARTICLE
Linda R Duska, Sarah E Podwika, Leslie M Randall
The year 2023 was an extraordinary year for the further development and expansion of novel treatments for all patients with cervical cancer, ranging from early stage to later stage and metastatic or recurrent disease. Individuals with early-stage disease will benefit from less invasive surgery with subsequent improvement in quality of life. The effectiveness of immunotherapy has been demonstrated in upfront, locally advanced cervical cancer and confirmed in advanced metastatic disease. Induction chemotherapy will play a role in some patients with locally advanced disease, particularly those in low resource areas of the world...
April 23, 2024: Cancer
https://read.qxmd.com/read/38651738/fep-augmentation-as-a-means-to-solve-data-paucity-problems-for-machine-learning-in-chemical-biology
#11
JOURNAL ARTICLE
Pieter B Burger, Xiaohu Hu, Ilya Balabin, Morné Muller, Megan Stanley, Fourie Joubert, Thomas M Kaiser
In the realm of medicinal chemistry, the primary objective is to swiftly optimize a multitude of chemical properties of a set of compounds to yield a clinical candidate poised for clinical trials. In recent years, two computational techniques, machine learning (ML) and physics-based methods, have evolved substantially and are now frequently incorporated into the medicinal chemist's toolbox to enhance the efficiency of both hit optimization and candidate design. Both computational methods come with their own set of limitations, and they are often used independently of each other...
April 23, 2024: Journal of Chemical Information and Modeling
https://read.qxmd.com/read/38651271/development-of-an-efficient-liposomal-dox-delivery-formulation-for-hcc-therapy-by-targeting-ck2%C3%AE
#12
JOURNAL ARTICLE
Ruixia Zhao, Sinan Cheng, Xue Bai, Danying Zhang, Hongming Fang, Wanlin Che, Wenxuan Zhang, Yujuan Zhou, Wei Duan, Qiumin Liang, Li Xiao, Guochao Nie, Yingchun Hou
Hepatocellular carcinoma (HCC) is a digestive tract cancer with high mortality and poor prognosis, especially in China. Current chemotherapeutic drugs lead to poor prognosis, low efficacy, and high side effects due to weak targeting specificity and rapidly formed multidrug resistance (MDR). Based on the previous studies on the doxorubicin (DOX) formulation for cancer targeting therapy, we developed a novel DOX delivery formulation for the targeting chemotherapy of HCC and DOX resistant HCC. HCSP4 was previously screened and casein kinase 2α (CK2α) was predicted as its specific target on HCC cells in our lab...
April 2024: Biotechnology Journal
https://read.qxmd.com/read/38651156/anlotinib-in-chinese-patients-aged-%C3%A2-70-years-with-advanced-non-squamous-non-small-cell-lung-cancer-without-prior-chemotherapy-a-multicenter-single-arm-pilot-trial
#13
JOURNAL ARTICLE
Da Zhao, Zhengguo Li, Xinli Hou, Lei Yang, Zeng Li, Li Yan, Hongling Li, Hua Liu, Xiaoping Liu, Feixue Song, Guixiang Li, Yu Zhang, Xiaoming Hou
BACKGROUND: Based on pharmacoeconomics, drug availability and actual treatment, optimal treatment regimens for Chinese non-small-cell lung carcinoma (NSCLC) patients over 70 years old are needed. METHODS: This multicenter, single-arm pilot trial enrolled patients with advanced non-squamous NSCLC who refused systemic chemotherapy. Eligible patients received anlotinib (12 mg/day, d1-14, Q3W) until disease progression, intolerant toxicities, or withdrawal from the study...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38651149/drug-repositioning-and-ovarian-cancer-a-study-based-on-mendelian-randomisation-analysis
#14
JOURNAL ARTICLE
Lin Zhu, Hairong Zhang, Xiaoyu Zhang, Ruoqing Chen, Lei Xia
BACKGROUND: The role of drug repositioning in the treatment of ovarian cancer has received increasing attention. Although promising results have been achieved, there are also major controversies. METHODS: In this study, we conducted a drug-target Mendelian randomisation (MR) analysis to systematically investigate the reported effects and relevance of traditional drugs in the treatment of ovarian cancer. The inverse-variance weighted (IVW) method was used in the main analysis to estimate the causal effect...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38651022/substance-abuse-and-sleep-quality-in-university-students
#15
JOURNAL ARTICLE
Maryam Zavar Mousavi, Amirhossein Tamimi, Mitra Farsam, Maryam Kousha
BACKGROUND: Substance abuse remains a challenging public health issue, especially among young people. It has been shown that poor sleep and substance abuse may have mutual intensifying effects. This study aimed to evaluate the rates of substance abuse, cigarette smoking, and alcohol consumption and their association with sleep disturbances among university students in 2021. METHODS: The participants were the students of the Faculty of Sciences, University of Guilan, Iran in 2021...
February 2024: Addiction & Health
https://read.qxmd.com/read/38650890/entry-inhibitors-as-arenavirus-antivirals
#16
REVIEW
Kruthika Iyer, Zhonghao Yan, Susan R Ross
Arenaviruses belonging to the Arenaviridae family, genus mammarenavirus, are enveloped, single-stranded RNA viruses primarily found in rodent species, that cause severe hemorrhagic fever in humans. With high mortality rates and limited treatment options, the search for effective antivirals is imperative. Current treatments, notably ribavirin and other nucleoside inhibitors, are only partially effective and have significant side effects. The high lethality and lack of treatment, coupled with the absence of vaccines for all but Junín virus, has led to the classification of these viruses as Category A pathogens by the Centers for Disease Control (CDC)...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38650742/bioactive-compounds-from-morchella-esculenta-as-potential-inhibitors-of-rna-binding-protein-la-in-ovarian-cancer-a-molecular-modeling-and-quantum-mechanics-approach
#17
JOURNAL ARTICLE
Gbenga Dairo, Matthew N Ward, Mette Soendergaard, John J Determan
La protein is significantly expressed in various malignant tumors, including ovarian cancer (OC), which is related to the poor response to platinum-based chemotherapy. Thus, inhibiting La protein could control the expression of the potential downstream genes involved in promoting proliferation and chemotherapy resistance to OC, which could serve as a therapeutic intervention. Through a molecular docking approach, 12 compounds from Morchella esculenta were screened against the crystal structure of La protein and four hit compounds were identified, including beta-carotene, p -hydroxybenzoic acid, gamma-tocopherol, and alpha-tocopherol, with a binding affinity of - 10...
2024: In Silico Pharmacology
https://read.qxmd.com/read/38650649/discovery-and-validation-of-molecular-patterns-and-immune-characteristics-in-the-peripheral-blood-of-ischemic-stroke-patients
#18
JOURNAL ARTICLE
Lin Cong, Yijie He, Yun Wu, Ze Li, Siwen Ding, Weiwei Liang, Xingjun Xiao, Huixue Zhang, Lihua Wang
BACKGROUND: Stroke is a disease with high morbidity, disability, and mortality. Immune factors play a crucial role in the occurrence of ischemic stroke (IS), but their exact mechanism is not clear. This study aims to identify possible immunological mechanisms by recognizing immune-related biomarkers and evaluating the infiltration pattern of immune cells. METHODS: We downloaded datasets of IS patients from GEO, applied R language to discover differentially expressed genes, and elucidated their biological functions using GO, KEGG analysis, and GSEA analysis...
2024: PeerJ
https://read.qxmd.com/read/38650147/development-of-a-novel-six-dna-damage-response-related-prognostic-signature-in-osteosarcoma
#19
JOURNAL ARTICLE
Tianyang Li, Zhenzhou Tang, Sucheng Li, Minhua Lu
DNA damage response (DDR) plays a vital role in the development of cancer. Nevertheless, in osteosarcoma, the potential of DDR-related genes (DDRGs) remains unclear. Thus, the current research is intended to investigate the mechanisms of DDRGs in the development of osteosarcoma and to explore potential DDR-related biomarkers in forecasting the prognosis of osteosarcoma patients. The osteosarcoma genomic data from TCGA, GEO and cBioPortal databases were utilized for screening and identification of differentially expressed DDRGs (DEDDRGs)...
March 31, 2024: Cellular and Molecular Biology
https://read.qxmd.com/read/38650034/the-immunosuppressive-drug-cyclosporin-a-has-an-immunostimulatory-function-in-cd8-t-cells
#20
JOURNAL ARTICLE
Jannis Wißfeld, Marvin Hering, Nora Ten Bosch, Guoliang Cui
Cyclosporin A is a well-established immunosuppressive drug used to treat or prevent graft-versus-host disease, the rejection of organ transplants, autoimmune disorders, and leukemia. It exerts its immunosuppressive effects by inhibiting calcineurin-mediated dephosphorylation of the nuclear factor of activated T cells (NFAT), thus preventing its nuclear entry and suppressing T cell activation. Here we report an unexpected immunostimulatory effect of cyclosporin A in activating the mammalian target of rapamycin complex 1 (mTORC1), a crucial metabolic hub required for T cell activation...
April 22, 2024: European Journal of Immunology
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