keyword
https://read.qxmd.com/read/38566591/electronic-structure-and-transport-in-the-potential-luttinger-liquids-csnb-3-br-7-s-and-rbnb-3-br-7-s
#1
JOURNAL ARTICLE
Fabian Grahlow, Fabian Strauß, Marcus Scheele, Markus Ströbele, Alberto Carta, Sophie F Weber, Scott Kroeker, Carl P Romao, H-Jürgen Meyer
The crystal structures of ANb3 Br7 S (A = Rb and Cs) have been refined by single crystal X-ray diffraction, and are found to form highly anisotropic materials based on chains of the triangular Nb3 cluster core. The Nb3 cluster core contains seven valence electrons, six of them being assigned to Nb-Nb bonds within the Nb3 triangle and one unpaired d electron. The presence of this surplus electron gives rise to the formation of correlated electronic states. The connectivity in the structures is represented by one-dimensional [Nb3 Br7 S]- chains, containing a sulphur atom capping one face (μ3 ) of the triangular niobium cluster, which is believed to induce an important electronic feature...
April 3, 2024: Physical Chemistry Chemical Physics: PCCP
https://read.qxmd.com/read/38342783/fluoride-transport-in-arabidopsis-thaliana-plants-is-impaired-in-fluoride-exporter-fex-mutants
#2
JOURNAL ARTICLE
S Lori Tausta, Kathryn Fontaine, Ansel T Hillmer, Scott A Strobel
Fluoride is an environmental toxin prevalent in water, soil, and air. A fluoride transporter called Fluoride EXporter (FEX) has been discovered across all domains of life, including bacteria, single cell eukaryotes, and all plants, that is required for fluoride tolerance. How FEX functions to protect multicellular plants is unknown. In order to distinguish between different models, the dynamic movement of fluoride in wildtype (WT) and fex mutant plants was monitored using [18 F]fluoride with positron emission tomography...
February 11, 2024: Plant Molecular Biology
https://read.qxmd.com/read/38329042/the-impact-of-second-shell-nucleotides-on-ligand-specificity-in-cyclic-dinucleotide-riboswitches
#3
JOURNAL ARTICLE
Kathryn M Barth, David A Hiller, Scott A Strobel
Ligand specificity is an essential requirement for all riboswitches. Some variant riboswitches utilize a common structural motif, yet through subtle sequence differences, they are able to selectively respond to different small molecule ligands and regulate downstream gene expression. These variants discriminate between structurally and chemically similar ligands. Crystal structures provide insight into how specificity is achieved. However, ligand specificity cannot always be explained solely by nucleotides in direct contact with the ligand...
February 8, 2024: Biochemistry
https://read.qxmd.com/read/37923241/five-year-sustained-impact-of-a-thoracic-enhanced-recovery-after-surgery-program
#4
JOURNAL ARTICLE
Andrew M Young, Sindri A Viktorsson, Raymond J Strobel, Evan P Rotar, Christopher Cramer, Christopher Scott, Phil Carrott, Randal S Blank, Linda W Martin
BACKGROUND: Our thoracic enhanced recovery program (ERP) decreased the use of postoperative morphine equivalents and hospital costs 1 year after implementation at our tertiary center. The sustainability and potential increasing benefit of this program were evaluated. METHODS: From 2015 to 2021, we prospectively analyzed the outcomes of patients who underwent elective pleural, pulmonary, or mediastinal operations at our institution. Patients were separated on the basis of the incision (video-assisted thoracoscopic surgery [VATS] or thoracotomy)...
November 3, 2023: Annals of Thoracic Surgery
https://read.qxmd.com/read/37660987/breakthroughs-in-understanding-and-treating-eosinophilic-gastrointestinal-diseases-presented-at-the-cegir-tigers-symposium-at-the-2022-american-academy-of-allergy-asthma-immunology-meeting
#5
REVIEW
Mirna Chehade, Benjamin L Wright, Dan Atkins, Seema S Aceves, Steven J Ackerman, Amal H Assa'ad, Maureen Bauer, Margaret H Collins, Scott P Commins, Carla M Davis, Evan S Dellon, Bethan Doerfler, Gerald J Gleich, Sandeep K Gupta, David A Hill, Elizabeth T Jensen, David Katzka, Kara Kliewer, Ellyn Kodroff, Leah C Kottyan, Shay Kyle, Amanda B Muir, Robert D Pesek, Kathryn Peterson, Wayne G Shreffler, Jonathan M Spergel, Mary Jo Strobel, Joshua Wechsler, Nives Zimmermann, Glenn T Furuta, Marc E Rothenberg
The Consortium of Eosinophilic Gastrointestinal Diseases and The International Gastrointestinal Eosinophil Researchers organized a day-long symposium at the 2022 Annual Meeting of the American Academy of Allergy, Asthma & Immunology. The symposium featured a review of recent discoveries in the basic biology and pathogenesis of eosinophilic gastrointestinal diseases (EGIDs) in addition to advances in our understanding of the clinical features of EGIDs. Diagnostic and management approaches were reviewed and debated, and clinical trials of emerging therapies were highlighted...
December 2023: Journal of Allergy and Clinical Immunology
https://read.qxmd.com/read/37588777/enhancing-diversity-equity-inclusion-and-accessibility-in-eosinophilic-gastrointestinal-disease-research-the-consortium-for-eosinophilic-gastrointestinal-disease-researchers-journey
#6
REVIEW
Mirna Chehade, Glenn Furuta, Amy Klion, J Pablo Abonia, Seema Aceves, Paroma Bose, Margaret H Collins, Carla Davis, Evan S Dellon, Grant Eickel, Gary Falk, Sandeep Gupta, Girish Hiremath, Amari Howard, Elizabeth T Jensen, Susamita Kesh, Paneez Khoury, Kendra Kocher, Ellyn Kodroff, Shay Kyle, NaDea Mak, Dawn McCoy, Pooja Mehta, Paul Menard-Katcher, Vincent Mukkada, Ally Paliana, Marc Rothenberg, Kathleen Sable, Cara Schmitt, Melissa Scott, Jonathan Spergel, Mary Jo Strobel, Joshua B Wechsler, Guang-Yu Yang, Amy Zicarelli, Amanda B Muir, Benjamin L Wright, Dominique D Bailey
In response to the social inequities that exist in health care, the NIH-funded Consortium of Eosinophilic Gastrointestinal Disease Researchers (CEGIR) recently formed a diversity committee to examine systemic racism and implicit bias in the care and research of eosinophilic gastrointestinal diseases (EGIDs). Herein, we describe our process, highlighting milestones and issues addressed since the committee's inception, which we hope will inspire other researchers to enhance diversity, equity, inclusion, and accessibility (DEIA) in their fields...
2023: Ther Adv Rare Dis
https://read.qxmd.com/read/37352738/temporal-cluster-analysis-of-deep-sternal-wound-infection-in-a-regional-quality-collaborative
#7
JOURNAL ARTICLE
Andrew D Hawkins, Erik J Scott, Jeison De Guzman, Sarah J Ratcliffe, J Hunter Mehaffey, Robert B Hawkins, Raymond J Strobel, Alan Speir, Mark Joseph, Leora T Yarboro, Nicholas R Teman
INTRODUCTION: Deep sternal wound infection (DSWI) is a rare complication associated with high mortality. Seasonal variability in surgical site infections has been demonstrated, however, these patterns have not been applied to DSWI. The purpose of this study was to assess temporal clustering of DSWIs. METHODS: All cardiac surgery patients who underwent sternotomy were queried from a regional Society of Thoracic Surgeons database from 17 centers from 2001 to 2019...
June 21, 2023: Journal of Surgical Research
https://read.qxmd.com/read/37130702/translation-regulation-by-a-guanidine-ii-riboswitch-is-highly-tunable-in-sensitivity-dynamic-range-and-apparent-cooperativity
#8
JOURNAL ARTICLE
Caroline M Focht, David A Hiller, Sabrina G Grunseich, Scott A Strobel
Riboswitches function as important translational regulators in bacteria. Comprehensive mutational analysis of transcriptional riboswitches has been used to probe the energetic intricacies of interplay between the aptamer and expression platform, but translational riboswitches have been inaccessible to massively parallel techniques. The Guanidine-II (Gdm-II) riboswitch is an exclusively translational class. We have integrated RelE cleavage with next generation sequencing to quantify ligand-dependent changes in translation initiation for all single and double mutations of the Pseudomonas aeruginosa Gdm-II riboswitch, a total of more than 23,000 variants...
May 2, 2023: RNA
https://read.qxmd.com/read/37063148/influence-of-heart-transplant-allocation-changes-on-hospital-resource-utilization
#9
JOURNAL ARTICLE
Robert B Hawkins, Erik Scott, J Hunter Mehaffey, Raymond J Strobel, Alan Speir, Mohammed Quader, Nicholas R Teman, Leora T Yarboro
OBJECTIVES: The 2018 change in the heart transplant allocation system resulted in greater use of temporary mechanical circulatory support. We hypothesized that the allocation change has increased hospital resource utilization, including length of stay and cost. METHODS: All heart transplant patients within a regional Society of Thoracic Surgeons database were included (2012-2020). Patients were stratified before and after the transplant allocation changes into early (January 2012-September 2018) and late eras (November 2018-June 2020)...
March 2023: JTCVS open
https://read.qxmd.com/read/36799248/pre-analytical-considerations-in-the-development-of-a-prototype-sars-cov-2-antigen-architect-automated-immunoassay
#10
JOURNAL ARTICLE
Philip M Hemken, Eitan Israeli, Russell Taylor, Chris Jacobson, Maria Datwyler, Rene Geissler, Abbas Hadji, Nicolette Jeanblanc, Kinnari Pandya, Marilee Marcinkus, Ryan Piktel, M Felicia Bogdan, Mary Rodgers, Mark Anderson, Robert Ziemann, Bryan C Tieman, David Hawksworth, Jeffrey Moore, Kathy S Otis, Christopher C Marohnic, Josie Corby, Bailin Tu, Zhihong Lin, Alak Kar, James Hartnett, Carolyn Strobel, Svetoslava Gregory, Tracey Rae, A Scott Muerhoff, Susan Brophy, John R Hackett, David Daghfal, Matthew L Faron, Amorina Cruz, Phaedre Mohr, Lori Sokoll, Gerard J Davis
OBJECTIVES: To evaluate pre-analytical challenges related to high-volume central laboratory SARS-CoV-2 antigen testing with a prototype qualitative SARS-CoV-2 antigen immunoassay run on the automated Abbott ARCHITECT instrument. METHODS: Contrived positive and negative specimens and de-identified nasal and nasopharyngeal specimens in transport media were used to evaluate specimen and reagent on-board stability, assay analytical performance and interference, and clinical performance...
February 20, 2023: Clinical Chemistry and Laboratory Medicine: CCLM
https://read.qxmd.com/read/36603771/a-small-molecule-that-targets-the-processivity-factor-of-molluscum-contagiosum-virus-has-therapeutic-potential
#11
JOURNAL ARTICLE
Hancheng Guan, Manunya Nuth, Stuart N Isaacs, Yuhong Xiao, Richard W Scott, Michael H Parker, Eric D Strobel, John L Kulp, Thomas R Bailey, Allen B Reitz, Robert P Ricciardi
Molluscum contagiosum (MC) is an infectious disease that occurs only in humans with a tropism that is narrowly restricted to the outermost epidermal layer of the skin. Molluscum contagiosum virus (MCV) is the causative agent of MC which produces skin lesions that can persist for months to several years. MCV is efficiently transmitted by direct physical contact or by indirect contact with fomites. MC is most prevalent in children and immune compromised patients. The failure to develop a drug that targets MCV replication has been hampered for decades by the inability to propagate MCV in cell culture...
January 2, 2023: Antiviral Research
https://read.qxmd.com/read/36331146/early-mortality-among-aboriginal-and-non-aboriginal-women-who-had-a-preterm-birth-in-western-australia-a-population-based-cohort-study
#12
JOURNAL ARTICLE
Helen D Bailey, Caitlin Gray, Akilew A Adane, Natalie A Strobel, Scott W White, Rhonda Marriott, Gizachew A Tessema, Carrington C J Shepherd, Mary Sharp
BACKGROUND: Having a preterm (<37 weeks' gestation) birth may increase a woman's risk of early mortality. Aboriginal and Torres Strait Islander (hereafter Aboriginal) women have higher preterm birth and mortality rates compared with other Australian women. OBJECTIVES: We investigated whether a history of having a preterm birth was associated with early mortality in women and whether these associations differed by Aboriginal status. METHODS: This retrospective cohort study used population-based perinatal records of women who had a singleton birth between 1980 and 2015 in Western Australia linked to Death Registry data until June 2018...
November 4, 2022: Paediatric and Perinatal Epidemiology
https://read.qxmd.com/read/36282204/cells-adapt-to-resist-fluoride-through-metabolic-deactivation-and-intracellular-acidification
#13
JOURNAL ARTICLE
Nichole R Johnston, Gary Cline, Scott A Strobel
Fluoride is highly abundant in the environment. Many organisms have adapted specific defense mechanisms against high concentrations of fluoride, including the expression of proteins capable of removing fluoride from cells. However, these fluoride transporters have not been identified in all organisms, and even organisms that express fluoride transporters vary in tolerance capabilities across species, individuals, and even tissue types. This suggests that alternative factors influence fluoride tolerance. We screened for adaptation against fluoride toxicity through an unbiased mutagenesis assay conducted on Saccharomyces cerevisiae lacking the fluoride exporter FEX, the primary mechanism of fluoride resistance...
October 25, 2022: Chemical Research in Toxicology
https://read.qxmd.com/read/35871288/efficient-quantitative-monitoring-of-translational-initiation-by-rele-cleavage
#14
JOURNAL ARTICLE
Caroline M Focht, Scott A Strobel
The sequences of the 5' untranslated regions (5'-UTRs) of mRNA alter gene expression across domains of life. Transcriptional modulators can be easily assayed through transcription termination, but translational regulators often require indirect, laborious methods. We have leveraged RelE's ribosome-dependent endonuclease activity to develop a quantitative assay to monitor translation initiation of cis-regulatory mRNAs. RelE cleavage accurately reports ligand-dependent changes in ribosome association for two translational riboswitches and provides quantitative information about each switch's sensitivity and range of response...
July 25, 2022: Nucleic Acids Research
https://read.qxmd.com/read/35868555/socioeconomic-distress-associated-with-increased-use-of-percutaneous-coronary-intervention-over-coronary-artery-bypass-grafting
#15
JOURNAL ARTICLE
Raymond J Strobel, J Hunter Mehaffey, Robert B Hawkins, Andrew M Young, Erik J Scott, Mohammed Quader, Gregory J Dehmer, Jeffrey B Rich, Gorav Ailawadi, Irving L Kron, Michael Ragosta, Leora T Yarboro, Nicholas R Teman
BACKGROUND: The influence of socioeconomic determinants of health on choice of percutaneous coronary intervention (PCI) vs coronary artery bypass grafting (CABG) for coronary artery disease is unknown. We hypothesized that higher Distressed Communities Index (DCI) scores, a comprehensive socioeconomic ranking by zip code, would be associated with more frequent PCI. METHODS: All patients undergoing isolated CABG or PCI in a regional American College of Cardiology CathPCI registry and The Society of Thoracic Surgeons database (2018-2021) were assigned DCI scores (0 = no distress, 100 = severe distress) based on education level, poverty, unemployment, housing vacancies, median income, and business growth...
July 19, 2022: Annals of Thoracic Surgery
https://read.qxmd.com/read/35454889/srpx-emerges-as-a-potential-tumor-marker-in-the-extracellular-vesicles-of-glioblastoma
#16
JOURNAL ARTICLE
Elisabet Ampudia-Mesias, Samia El-Hadad, Charles Scott Cameron, Adelheid Wöhrer, Thomas Ströbel, Nurten Saydam, Okay Saydam
Extracellular vesicles (EVs) may be used as a non-invasive screening platform to discover markers associated with early diagnosis, prognosis, and treatment response. Such an approach is invaluable for diseases such as glioblastoma, for which only a few non-invasive diagnostic or prognostic markers are available. We used mass spectrometry to analyze proteomics profiles of EVs derived from four glioblastoma cell lines and human primary astrocytes (HPAs) and found that SRPX is the only protein enriched in the majority of glioblastoma EVs that was absent in the HPA-derived EVs...
April 14, 2022: Cancers
https://read.qxmd.com/read/35341761/development-of-a-new-automated-il-6-immunoassay
#17
JOURNAL ARTICLE
Eitan Israeli, Hideaki Okura, Barry Kreutz, Ryan Piktel, Abbas Hadji, Bailin Tu, Zhihong Lin, David J Hawksworth, Bryan C Tieman, Carolyn J Strobel, Robert Ziemann, Thomas P Leary, A Scott Muerhoff, Philip M Hemken
OBJECTIVES: Quantitative detection of interleukin-6 (IL-6) in serum and plasma can help monitor immune responses and the development of acute inflammation to guide patient management. We developed an IL-6 immunoassay for use with the automated ARCHITECT system for detecting an increase in the inflammatory response. METHODS: Immunized mouse sera were tested and selected B-cells were harvested for fusion with myeloma cells. A panel of monoclonal antibodies were produced, from which capture and detection monoclonal antibodies for the prototype IL-6 immunoassay were selected and screened on the ARCHITECT instrument...
May 2022: Journal of Immunological Methods
https://read.qxmd.com/read/35124897/detection-of-pathogenic-leptospira-spp-in-herpetofauna-in-central-appalachia
#18
JOURNAL ARTICLE
Ashutosh Verma, LaRoy Brandt, Samantha Runser, Karen Gruszynski, Kenneth Gallatin, Joey Morgan, Hanna Barnhart, Conner Duke, Scott Brovarney, Allison Geer, Emily Willems, Raeshelle Strobel, Christian Bryant, Emma Pawlowski, Ashana Thaker
Leptospirosis is a water borne zoonotic disease of global significance that is caused by pathogenic species of the genus Leptospira. Pathogenic leptospires live in the kidneys of reservoir or infected animals and are shed in their urine contaminating water, soil, etc. Rodents are considered the primary reservoir of leptospirosis, but little is known about the role of herpetofauna (non-avian reptiles and amphibians) in the epidemiology of the disease. To address this, various species of amphibians and reptiles in the Cumberland Gap Region of the Central Appalachia were screened for the presence of Leptospira spp...
June 2022: Zoonoses and Public Health
https://read.qxmd.com/read/35093386/changes-in-controllable-coronary-artery-bypass-grafting-practice-for-white-and-black-americans
#19
JOURNAL ARTICLE
Evan P Rotar, Erik J Scott, Robert B Hawkins, J Hunter Mehaffey, Raymond J Strobel, Eric J Charles, Mohammed A Quader, Mark Joseph, Nicholas R Teman, Leora T Yarboro, Gorav Ailawadi
BACKGROUND: Racial disparities in outcomes following cardiac surgery are well-reported. We sought to determine if variation by race exists in controllable practices during coronary artery bypass grafting (CABG). We hypothesized that racial disparities exist in CABG quality metrics, but have improved over time. METHODS: All patients undergoing isolated CABG (2000-2019) in a multi-state database were stratified into three eras by race. Analysis included propensity matched White and Black Americans...
January 27, 2022: Annals of Thoracic Surgery
https://read.qxmd.com/read/34061822/fungal-and-host-protein-persulfidation-are-functionally-correlated-and-modulate-both-virulence-and-antifungal-response
#20
JOURNAL ARTICLE
Monica Sueiro-Olivares, Jennifer Scott, Sara Gago, Dunja Petrovic, Emilia Kouroussis, Jasmina Zivanovic, Yidong Yu, Marlene Strobel, Cristina Cunha, Darren Thomson, Rachael Fortune-Grant, Sina Thusek, Paul Bowyer, Andreas Beilhack, Agostinho Carvalho, Elaine Bignell, Milos R Filipovic, Jorge Amich
Aspergillus fumigatus is a human fungal pathogen that can cause devastating pulmonary infections, termed "aspergilloses," in individuals suffering immune imbalances or underlying lung conditions. As rapid adaptation to stress is crucial for the outcome of the host-pathogen interplay, here we investigated the role of the versatile posttranslational modification (PTM) persulfidation for both fungal virulence and antifungal host defense. We show that an A. fumigatus mutant with low persulfidation levels is more susceptible to host-mediated killing and displays reduced virulence in murine models of infection...
June 2021: PLoS Biology
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