keyword
https://read.qxmd.com/read/38141134/analysis-of-gata3-and-foxa2-expression-suggests-that-downregulation-of-genes-involved-in-the-maintenance-of-a-mature-yolk-sac-tumor-phenotype-may-underlie-sarcomatoid-transformation
#21
JOURNAL ARTICLE
Costantino Ricci, Francesca Ambrosi, Alessia Grillini, Francesco Massari, Michelangelo Fiorentino, Maurizio Colecchia, Thomas M Ulbright, Andres Martin Acosta
In the post-chemotherapy setting, germ cell tumors of the testis (GCTT) that resemble non-specific sarcomas and co-express cytokeratins and glypican-3 (GPC3) are diagnosed as "sarcomatoid yolk sac tumor postpubertal-type (YSTpt)". The diagnosis of sarcomatoid YSTpt is clinically relevant but challenging due to its rarity, non-specific histology, and negative α-fetoprotein (AFP) staining. Recently, FOXA2 has emerged as a key-gene in the reprogramming of GCTT (activating the transcription of several genes, among which GATA3), and immunohistochemical studies showed that GATA3 and FOXA2 have a higher sensitivity for non-sarcomatoid YSTpt than GPC3 and AFP...
December 23, 2023: Virchows Archiv: An International Journal of Pathology
https://read.qxmd.com/read/38137011/transcriptome-profiling-after-early-spinal-cord-injury-in-the-axolotl-and-its-comparison-with-rodent-animal-models-through-rna-seq-data-analysis
#22
JOURNAL ARTICLE
Juan Carlos González-Orozco, Itzel Escobedo-Avila, Iván Velasco
BACKGROUND: Traumatic spinal cord injury (SCI) is a disabling condition that affects millions of people around the world. Currently, no clinical treatment can restore spinal cord function. Comparison of molecular responses in regenerating to non-regenerating vertebrates can shed light on neural restoration. The axolotl ( Ambystoma mexicanum ) is an amphibian that regenerates regions of the brain or spinal cord after damage. METHODS: In this study, we compared the transcriptomes after SCI at acute (1-2 days after SCI) and sub-acute (6-7 days post-SCI) periods through the analysis of RNA-seq public datasets from axolotl and non-regenerating rodents...
December 8, 2023: Genes
https://read.qxmd.com/read/38135007/fxr-controls-insulin-content-by-regulating-foxa2-mediated-insulin-transcription
#23
JOURNAL ARTICLE
Dan Yan, Moyang Lv, Xiangchen Kong, Linxian Feng, Ying Ying, Wenjuan Liu, Xin Wang, Xiaosong Ma
Farnesoid X receptor (FXR) is a nuclear ligand-activated receptor of bile acids that plays a role in the modulation of insulin content. However, the underlying molecular mechanisms remain unclear. Forkhead box a2 (Foxa2) is an important nuclear transcription factor in pancreatic β-cells and is involved in β-cell function. We aimed to explore the signaling mechanism downstream of FXR to regulate insulin content and underscore its association with Foxa2 and insulin gene (Ins) transcription. All experiments were conducted on FXR transgenic mice, INS-1823/13 cells, and diabetic Goto-Kakizaki (GK) rats undergoing sham or Roux-en-Y gastric bypass (RYGB) surgery...
December 20, 2023: Biochimica et Biophysica Acta. Molecular Cell Research
https://read.qxmd.com/read/38084145/foxa2-attenuates-steatosis-and-inhibits-the-nf-%C3%AE%C2%BAb-ikk-signaling-pathway-in-nonalcoholic-fatty-liver-disease
#24
JOURNAL ARTICLE
Li Yang, Qiang Ma, Jiayu Chen, Xiangcai Kong, Xiaohui Yu, Wei Wang
OBJECTIVE: Forkhead box a2 (Foxa2) is proven to be an insulin-sensitive transcriptional regulator and affects hepatic steatosis. This study aims to investigate the mechanism by which Foxa2 affects nonalcoholic fatty liver disease (NAFLD). METHODS: Animal and cellular models of NAFLD were constructed using high-fat diet (HFD) feeding and oleic acid (OA) stimulation, respectively. NAFLD mice received tail vein injections of either an overexpressing negative control (oe-NC) or Foxa2 (oe-Foxa2) for four weeks...
2023: PeerJ
https://read.qxmd.com/read/38072043/foxa2-activates-hif2%C3%AE-expression-to-promote-tumor-progression-and-is-regulated-by-the-e3-ubiquitin-ligase-vhl-in-renal-cell-carcinoma
#25
JOURNAL ARTICLE
Dongjun Yang, Qixiang Li, Peifen Lu, Dongliang Wu, Wenyang Li, Xingjun Meng, Mengying Xing, Wenbing Shangguan, Bing Chen, Jie Yang, Zhihong Zhang, Zengjun Wang, David C S Huang, Quan Zhao
Renal cell carcinoma (RCC) is a frequent malignancy of the urinary system with high mortality and morbidity. However, the molecular mechanisms underlying RCC progression are still largely unknown. In this study, we identified FOXA2, a pioneer transcription factor, as a driver oncogene for RCC. We show that FOXA2 was commonly upregulated in human RCC samples and promoted renal cancer cell proliferation, as evidenced by assays of cell viability, colony formation, migratory and invasive capabilities, and stemness properties...
December 8, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/38014349/generation-of-salivary-glands-derived-from-pluripotent-stem-cells-via-conditional-blastocyst-complementation
#26
Junichi Tanaka, Akihiro Miura, Yuko Shimamura, Youngmin Hwang, Dai Shimizu, Yuri Kondo, Anri Sawada, Hemanta Sarmah, Zurab Ninish, Kenji Mishima, Munemasa Mori
Various patients suffer from dry mouth due to salivary gland dysfunction. Whole salivary gland generation and transplantation is a potential therapy to resolve this issue. However, the lineage permissible to design the entire salivary gland generation has been enigmatic. Here, we discovered Foxa2 as a lineage critical for generating a salivary gland via conditional blastocyst complementation (CBC). Foxa2 linage, but not Shh nor Pitx2, initiated to label between the boundary region of the endodermal and the ectodermal oral mucosa before primordial salivary gland formation, resulting in marking the entire salivary gland...
November 15, 2023: bioRxiv
https://read.qxmd.com/read/37983829/nuclear-acly-protects-liver-from-ischemia-reperfusion-injury
#27
JOURNAL ARTICLE
Wenbin Gao, Liping Zhang, Ziru Li, Tong Wu, Chunhui Lang, Michael W Mulholland, Weizhen Zhang
BACKGROUND AIMS: Hepatic ischemia-reperfusion (IR) injury is the most common complication that occurs in liver surgery and hemorrhagic shock. ATP citrate lyase (Acly) plays a pivotal role in chromatin modification via generating acetyl-CoA for histone acetylation to influence biological processes. We aim to examine the roles of Acly, which is highly expressed in hepatocytes, in liver IR injury. APPROACH: The functions of Acly in hepatic IR injury were examined in the mouse model with hepatocytes-specific knockout of Acly...
November 20, 2023: Hepatology: Official Journal of the American Association for the Study of Liver Diseases
https://read.qxmd.com/read/37962938/uterine-glands-originate-from-islands-of-foxa2-positive-luminal-epithelium-cells-that-differentiate-de-novo-and-invade-uterine-stroma
#28
JOURNAL ARTICLE
Isabella Sellmer Ramos, Monica O Caldeira, Amanda L Patterson, Matthew C Lucy
No abstract text is available yet for this article.
November 14, 2023: Biology of Reproduction
https://read.qxmd.com/read/37961260/foxa1-2-dependent-epigenomic-reprogramming-drives-lineage-switching-in-lung-adenocarcinoma
#29
Katherine Gillis, Walter A Orellana, Emily Wilson, Timothy J Parnell, Gabriela Fort, Headtlove Essel Dadzie, Xiaoyang Zhang, Eric L Snyder
The ability of cancer cells to alter their identity is essential for tumor survival and progression. Loss of the pulmonary lineage specifier NKX2-1 within KRAS-driven lung adenocarcinoma (LUAD) enhances tumor progression and results in a pulmonary-to-gastric lineage switch that is dependent upon the activity of pioneer factors FoxA1 and FoxA2; however, the underlying mechanism remains largely unknown. Here, we show that FoxA1/2 reprogram the epigenetic landscape of NKX2-1-negative LUAD to facilitate a gastric identity...
November 2, 2023: bioRxiv
https://read.qxmd.com/read/37944068/ck1%C3%AE-deficiency-impairs-mouse-uterine-adenogenesis-by-inducing-epithelial-cell-apoptosis-through-gsk3%C3%AE-pathway-and-inhibiting-foxa2-expression-through-p53-pathway
#30
JOURNAL ARTICLE
Di Zhang, Chenyang Lu, Yewen Zhou, Xuan Luo, Hongzhou Guo, Jinglin Zhang, Qiao Gao, Hui Liu, Chongxing Shang, Sheng Cui
Uterine glands and their secretions are crucial for conceptus survival and implantation in rodents and humans. In mice, the development of uterine gland known as adenogenesis occurs after birth, whereas the adenogenesis in humans initiates from fetal life and completed at puberty. Uterine adenogenesis involves dynamic epithelial cell proliferation, differentiation and apoptosis. But it is largely unexplored about the mechanisms governing adenogenesis. CK1α plays important roles in regulating cell division, differentiation and death, but it is unknown whether CK1α affects adenogenesis...
November 7, 2023: Biology of Reproduction
https://read.qxmd.com/read/37923360/clathrin-light-chains-clca-and-clcb-have-non-redundant-roles-in-epithelial-lumen-formation
#31
JOURNAL ARTICLE
Yu Chen, Kit Briant, Marine D Camus, Frances M Brodsky
To identify functional differences between vertebrate clathrin light chains (CLCa or CLCb), phenotypes of mice lacking genes encoding either isoform were characterised. Mice without CLCa displayed 50% neonatal mortality, reduced body weight, reduced fertility, and ∼40% of aged females developed uterine pyometra. Mice lacking CLCb displayed a less severe weight reduction phenotype compared with those lacking CLCa and had no survival or reproductive system defects. Analysis of female mice lacking CLCa that developed pyometra revealed ectopic expression of epithelial differentiation markers (FOXA2 and K14) and a reduced number of endometrial glands, indicating defects in the lumenal epithelium...
January 2024: Life Science Alliance
https://read.qxmd.com/read/37914145/senp1-knockdown-mediated-ctcf-sumoylation-enhanced-its-stability-and-alleviated-lipopolysaccharide-evoked-inflammatory-injury-in-human-lung-fibroblasts-via-regulation-of-foxa2-transcription
#32
JOURNAL ARTICLE
Le Kang, Xinhua Wang, Jianfang Wang, Jing Guo, Wang Zhang, Ruirui Lei
BACKGROUND: Excessive inflammation is the main cause of treatment failure in neonatal pneumonia (NP). CCCTC-binding factor (CTCF) represents an important node in various inflammatory diseases. In the present study, we tried to clarify the function and underlying molecular mechanism of CTCF on an in vitro cellular model of NP, which was generated by simulating the human lung fibroblast cell line WI-38 with lipopolysaccharide (LPS). METHODS: The SUMOylation level and protein interaction were verified by Co-immunoprecipitation assay...
October 30, 2023: Biochimica et Biophysica Acta. General Subjects
https://read.qxmd.com/read/37882764/genome-wide-identification-of-notochord-enhancers-comprising-the-regulatory-landscape-of-the-brachyury-t-locus-in-mouse
#33
JOURNAL ARTICLE
Dennis Schifferl, Manuela Scholze-Wittler, Alba Villaronga Luque, Milena Pustet, Lars Wittler, Jesse V Veenvliet, Frederic Koch, Bernhard G Herrmann
The node and notochord are important signaling centers organizing dorso-ventral patterning of cells arising from neuro-mesodermal progenitors forming the embryonic body anlage. Due to the scarcity of notochord progenitors and notochord cells, a comprehensive identification of regulatory elements driving notochord-specific gene expression has been lacking. Here we have used ATAC-seq analysis of FACS-purified notochord cells from TS12-13 mouse embryos to identify 8921 putative notochord enhancers. In addition, we established a new model for generating notochord-like cells in culture, and found 3728 of these enhancers occupied by the essential notochord control factors Brachyury (T) and/or Foxa2...
October 26, 2023: Development
https://read.qxmd.com/read/37879405/pioneer-factor-foxa2-mediates-chromatin-conformation-changes-for-activation-of-bile-acid-targets-of-fxr
#34
JOURNAL ARTICLE
Yi Hao, Lu Han, Anqi Wu, Irina M Bochkis
BACKGROUND & AIMS: Transcription factors regulate gene expression that orchestrates liver physiology. Many bind at distal enhancers and chromatin looping is required to activate their targets. Chromatin architecture has been linked to essential functions of the liver, including metabolism and sexually dimorphic gene expression. We have previously shown that pioneer factor Foxa2 opens chromatin for binding of nuclear receptors FXR and LXRα during acute ligand activation. FXR is activated by bile acids and deletion of Foxa2 in the liver results in intrahepatic cholestasis...
October 23, 2023: Cellular and Molecular Gastroenterology and Hepatology
https://read.qxmd.com/read/37875418/foxa2-suppression-by-trim36-exerts-anti-tumor-role-in-colorectal-cancer-via-inducing-nrf2-gpx4-regulated-ferroptosis
#35
JOURNAL ARTICLE
Xin Liu, Chunli Yan, Chunxiao Chang, Fansong Meng, Wenjie Shen, Song Wang, Yi Zhang
The forkhead box transcription factor A2 (FOXA2) is a transcription factor and plays a key role in embryonic development, metabolism homeostasis and tumor cell proliferation; however, its regulatory potential in CRC is not fully understood. Here, it is found that FOXA2 expression is markedly up-regulated in tumor samples of CRC patients as compared with the normal tissues, which is closely associated with the worse survival in patients with CRC. Notably, a positive correlation between FOXA2 and nuclear factor erythroid 2-related factor 2 (Nrf2)/glutathione peroxidase 4 (GPX4) gene expression is observed in CRC patients...
October 24, 2023: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/37861292/conditional-blastocyst-complementation-of-a-defective-foxa2-lineage-efficiently-promotes-the-generation-of-the-whole-lung
#36
JOURNAL ARTICLE
Akihiro Miura, Hemanta Sarmah, Junichi Tanaka, Youngmin Hwang, Anri Sawada, Yuko Shimamura, Takehiro Otoshi, Yuri Kondo, Yinshan Fang, Dai Shimizu, Zurab Ninish, Jake Le Suer, Nicole C Dubois, Jennifer Davis, Shinichi Toyooka, Jun Wu, Jianwen Que, Finn J Hawkins, Chyuan-Sheng Lin, Munemasa Mori
Millions suffer from incurable lung diseases, and the donor lung shortage hampers organ transplants. Generating the whole organ in conjunction with the thymus is a significant milestone for organ transplantation because the thymus is the central organ to educate immune cells. Using lineage-tracing mice and human pluripotent stem cell (PSC)-derived lung-directed differentiation, we revealed that gastrulating Foxa2 lineage contributed to both lung mesenchyme and epithelium formation. Interestingly, Foxa2 lineage-derived cells in the lung mesenchyme progressively increased and occupied more than half of the mesenchyme niche, including endothelial cells, during lung development...
October 20, 2023: ELife
https://read.qxmd.com/read/37851674/prenatal-and-postnatal-challenges-affect-the-hypothalamic-molecular-pathways-that-regulate-hormonal-levels
#37
JOURNAL ARTICLE
Sandra L Rodriguez-Zas, Nicole L Southey, Laurie Rund, Adrienne M Antonson, Romana A Nowak, Rodney W Johnson
This study aimed to improve our understanding of how the hypothalamus mediates the effects of prenatal and postnatal challenges on behavior and sensitivity to stimuli. A pig model of virally initiated maternal immune activation (MIA) was used to investigate potential interactions of the prenatal challenge both with sex and with postnatal nursing withdrawal. The hypothalami of 72 females and males were profiled for the effects of MIA and nursing withdrawal using RNA-sequencing. Significant differential expression (FDR-adjusted p value < 0...
2023: PloS One
https://read.qxmd.com/read/37843228/multiple-factors-to-assist-human-derived-induced-pluripotent-stem-cells-to-efficiently-differentiate-into-midbrain-dopaminergic-neurons
#38
JOURNAL ARTICLE
Yalan Chen, Junxin Kuang, Yimei Niu, Hongyao Zhu, Xiaoxia Chen, Kwok-Fai So, Anding Xu, Lingling Shi
Midbrain dopaminergic neurons play an important role in the etiology of neurodevelopmental and neurodegenerative diseases. They also represent a potential source of transplanted cells for therapeutic applications. In vitro differentiation of functional midbrain dopaminergic neurons provides an accessible platform to study midbrain neuronal dysfunction and can be used to examine obstacles to dopaminergic neuronal development. Emerging evidence and impressive advances in human induced pluripotent stem cells, with tuned neural induction and differentiation protocols, makes the production of induced pluripotent stem cell-derived dopaminergic neurons feasible...
April 2024: Neural Regeneration Research
https://read.qxmd.com/read/37796967/key-transcriptional-effectors-of-the-pancreatic-acinar-phenotype-and-oncogenic-transformation
#39
JOURNAL ARTICLE
Ana Azevedo-Pouly, Michael A Hale, Galvin H Swift, Chinh Q Hoang, Tye G Deering, Jumin Xue, Thomas M Wilkie, L Charles Murtaugh, Raymond J MacDonald
Proper maintenance of mature cellular phenotypes is essential for stable physiology, suppression of disease states, and resistance to oncogenic transformation. We describe the transcriptional regulatory roles of four key DNA-binding transcription factors (Ptf1a, Nr5a2, Foxa2 and Gata4) that sit at the top of a regulatory hierarchy controlling all aspects of a highly differentiated cell-type-the mature pancreatic acinar cell (PAC). Selective inactivation of Ptf1a, Nr5a2, Foxa2 and Gata4 individually in mouse adult PACs rapidly altered the transcriptome and differentiation status of PACs...
2023: PloS One
https://read.qxmd.com/read/37781386/mutations-on-a-conserved-distal-enhancer-in-the-porcine-c-reactive-protein-gene-impair-its-expression-in-liver
#40
JOURNAL ARTICLE
Carles Hernández-Banqué, Teodor Jové-Juncà, Daniel Crespo-Piazuelo, Olga González-Rodríguez, Yuliaxis Ramayo-Caldas, Anna Esteve-Codina, Marie-José Mercat, Marco C A M Bink, Raquel Quintanilla, Maria Ballester
C-reactive protein (CRP) is an evolutionary highly conserved protein. Like humans, CRP acts as a major acute phase protein in pigs. While CRP regulatory mechanisms have been extensively studied in humans, little is known about the molecular mechanisms that control pig CRP gene expression. The main goal of the present work was to study the regulatory mechanisms and identify functional genetic variants regulating CRP gene expression and CRP blood levels in pigs. The characterization of the porcine CRP proximal promoter region revealed a high level of conservation with both cow and human promoters, sharing binding sites for transcription factors required for CRP expression...
2023: Frontiers in Immunology
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