keyword
https://read.qxmd.com/read/38557732/base-editing-correction-of-ocrl-in-lowe-syndrome-abe-mediated-functional-rescue-in-patient-derived-fibroblasts
#21
JOURNAL ARTICLE
Siyu Chen, Chien-Hui Lo, Zhiquan Liu, Qing Wang, Ke Ning, Tingting Li, Yang Sun
Lowe syndrome, a rare X-linked multisystem disorder presenting with major abnormalities in the eyes, kidneys, and central nervous system, is caused by mutations in OCRL gene (NG_008638.1). Encoding an inositol polyphosphate 5-phosphatase, OCRL catalyzes the hydrolysis of PI(4,5)P2 into PI4P. There are no effective targeted treatments for Lowe syndrome. Here, we demonstrate a novel gene therapy for Lowe syndrome in patient fibroblasts using an adenine base editor (ABE) that can efficiently correct pathogenic point mutations...
April 1, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38548924/association-between-adherence-to-24-h-movement-guidelines-and-sociodemographic-factors-among-malaysian-preschoolers-findings-from-seanuts-ii-malaysia
#22
JOURNAL ARTICLE
Christine Joan, Denise Koh, Jyh Eiin Wong, Ilse Khouw, Bee Koon Poh
BACKGROUND: Adhering to 24-h movement guidelines (24-hMG) have health benefits for young children; yet research on Malaysian preschoolers' movement behaviors is limited. This study investigates the association between adherence to 24-hMG and sociodemographic factors of Malaysian preschoolers. METHODS: Data from 939 preschoolers aged 3-6 years (mean age = 4.83 ± 0.04 years, 53.7% boys) from the Second South East Asian Nutrition Surveys (SEANUTS II) Malaysia study was analyzed...
March 28, 2024: American Journal of Human Biology: the Official Journal of the Human Biology Council
https://read.qxmd.com/read/38545139/role-of-sodium-iodide-symporter-overexpression-in-inhibiting-thyroid-cancer-cell-invasion-and-stem-cell-maintenance-by-inhibiting-the-%C3%AE-catenin-lef-1-pathway
#23
JOURNAL ARTICLE
Nan-Fang Luo, Jia-Li Li, Juan Lv, Fu-Kun Chen, Ya-Nan Li, Ming Tang, Peng-Jie Liu
BACKGROUND: In thyroid cancers, a reduction in the expression of the sodium/iodide symporter (NIS) is observed concomitant with a diminution in cancer cell differentiation. The β-catenin/LEF-1 pathway emerges as a crucial regulatory pathway influencing the functional expression of NIS in human thyroid cancer cells. Further research is required to comprehensively elucidate the role of NIS overexpression in impeding the progression of thyroid cancer cells. METHODS: Human papillary thyroid carcinoma (PTC) cell lines, specifically PTC-1 and KTC-1, were subjected to Scratch and Transwell assays, colony formation, and tumor sphere formation tests to investigate invasion and migration, focusing on the impact of NIS overexpression...
March 30, 2024: Heliyon
https://read.qxmd.com/read/38540310/repurposing-of-the-cardiovascular-drug-statin-for-the-treatment-of-cancers-efficacy-of-statin-dipyridamole-combination-treatment-in-melanoma-cell-lines
#24
JOURNAL ARTICLE
Nanami Irie, Kana Mizoguchi, Tomoko Warita, Mirai Nakano, Kasuga Sasaki, Jiro Tashiro, Tomohiro Osaki, Takuro Ishikawa, Zoltán N Oltvai, Katsuhiko Warita
Metastatic melanoma has a very poor prognosis. Statins, 3-hydroxy-3-methyl-glutaryl-coenzyme A reductase (HMGCR) inhibitors, are cholesterol-lowering agents with a potential for cancer treatment. The inhibition of HMGCR by statins, however, induces feedback, which paradoxically upregulates HMGCR expression via sterol regulatory element-binding protein-2 (SREBP2). Dipyridamole, an antiplatelet agent, is known to inhibit SREBP2 upregulation. We aimed to demonstrate the efficacy of statin-dipyridamole combination treatment in both human and spontaneously occurring canine melanoma cell lines...
March 21, 2024: Biomedicines
https://read.qxmd.com/read/38538568/the-genetic-admixture-and-assimilation-of-ahom-a-historic-migrant-from-thailand-to-india
#25
JOURNAL ARTICLE
Sachin Kumar, Prajjval Pratap Singh, Nagarjuna Pasupuleti, Veena Mushriff Tripathi, Milan Kumar Chauley, Gyaneshwer Chaubey, Niraj Rai
The Northeastern region of India is considered a gateway for modern humans' dispersal throughout Asia. This region is a mixture of various ethnic and indigenous populations amalgamating multiple ancestries. One reason for such amalgamation is that, South Asia experienced multiple historic migrations from various parts of the world. A few examples explored genetically are Jews, Parsis and Siddis. Ahom is a dynasty that historically migrated to India during the 12th century. However, this putative migration has not been studied genetically at high resolution...
March 27, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38538566/functional-analysis-of-cell-lines-derived-from-smad3-related-loeys-dietz-syndrome-patients-provides-insights-into-genotype-phenotype-relation
#26
JOURNAL ARTICLE
Nathalie P de Wagenaar, Lisa M van den Bersselaar, Hanny J H M Odijk, Sanne J M Stefens, Dieter P Reinhardt, Jolien W Roos-Hesselink, Roland Kanaar, Judith M A Verhagen, Hennie T Brüggenwirth, Ingrid M B H van de Laar, Ingrid van der Pluijm, Jeroen Essers
RATIONALE: Pathogenic (P)/likely pathogenic (LP) SMAD3 variants cause Loeys-Dietz syndrome type 3 (LDS3), which is characterized by arterial aneurysms, dissections and tortuosity throughout the vascular system combined with osteoarthritis. OBJECTIVES: Investigate the impact of P/LP SMAD3 variants with functional tests on patient-derived fibroblasts and vascular smooth muscle cells (VSMCs), to optimize interpretation of SMAD3 variants. METHODS: A retrospective analysis on clinical data from individuals with a P/LP SMAD3 variant and functional analyses on SMAD3 patient-derived VSMCs and SMAD3 patient-derived fibroblasts, differentiated into myofibroblasts...
March 27, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38538564/melanoma-associated-fibroblasts-in-tumor-promotion-flammation-and-antitumor-immunity-novel-mechanisms-and-potential-immunotherapeutic-strategies
#27
JOURNAL ARTICLE
Qiujun Zhou, Xiaoliang Jin, Ying Zhao, Yueping Wang, Maocan Tao, Yi Cao, Xiaohu Yin
Melanoma, renowned for its aggressive behavior and resistance to conventional treatments, stands as a formidable challenge in the oncology landscape. The dynamic and complex interplay between cancer cells and the tumor microenvironment has gained significant attention, revealing Melanoma-Associated Fibroblasts (MAFs) as central players in disease progression. The heterogeneity of MAFs endows them with a dual role in melanoma. This exhaustive review seeks to not only shed light on the multifaceted roles of MAFs in orchestrating tumor-promoting inflammation but also to explore their involvement in antitumor immunity...
March 27, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38538560/study-of-prognostic-splicing-factors-in-cancer-using-machine-learning-approaches
#28
JOURNAL ARTICLE
Mengyuan Yang, Jiajia Liu, Pora Kim, Xiaobo Zhou
Splicing factors (SFs) are the major RNA-binding proteins (RBPs) and key molecules that regulate the splicing of mRNA molecules through binding to mRNAs. The expression of splicing factors is frequently deregulated in different cancer types, causing the generation of oncogenic proteins involved in cancer hallmarks. In this study, we investigated the genes that encode RNA-binding proteins and identified potential splicing factors that contribute to the aberrant splicing applying a random forest classification model...
March 27, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38535075/anterior-scleral-thickness-and-anterior-segment-biometrics-measured-with-swept-source-ocular-coherence-tomography-in-high-myopic-eyes-with-and-without-glaucoma-a-comparative-study
#29
JOURNAL ARTICLE
Bachar Kudsieh, Rocio Vega-González, Sofia Bryan, Elena Almazan-Alonso, Mariluz Puertas, Lucia Gutiérrez-Martin, Ignacio Flores-Moreno, Jorge Ruiz-Medrano, Muhsen Samaan, Jose Maria Ruiz-Moreno
Background : To assess the anterior scleral thickness (AST), Schlemm's canal diameter (SCD), trabecular meshwork diameter (TMD) and conjunctiva tenon capsule thickness (CTT) in high myopic (HM) subjects and HM subjects with glaucoma (HMG) compared to control eyes. Methods: One hundred and twenty eyes were included, and AST at 0, 1, 2 and 3 mm from the scleral spur, SCD, TMD and CTT were measured. Results : Mean age was 64.2 ± 11.0 years, and the temporal SCD and temporal TMD were significantly longer in the HMG subjects compared to the controls (380...
March 20, 2024: Diagnostics
https://read.qxmd.com/read/38531334/drug-target-mendelian-randomization-study-of-pcsk9-and-hmg-coa-reductase-inhibition-and-atrial-fibrillation
#30
JOURNAL ARTICLE
Fuyuan Li, Yibin Mei, Qiongbi Wu, Xianjun Wu
INTRODUCTION: Atrial fibrillation (AF) is a prevalent cardiac arrhythmia with significant clinical implications. The potential influence of lipid-lowering therapies, specifically PCSK9 inhibitors (PCSK9i) and HMG-CoA reductase inhibitors (statins), on AF risk remains a topic of interest. This Mendelian Randomization (MR) study aimed to elucidate the causal relationship between genetically predicted inhibition of PCSK9 and HMG-CoA reductase and the risk of AF. METHODS: Utilizing publicly available, summary-level genome-wide association study (GWAS) data, we employed single-nucleotide polymorphisms (SNPs) associated with lower LDL-C levels as instruments for gene-simulated inhibition of PCSK9 and HMG-CoA reductase...
March 26, 2024: Cardiology
https://read.qxmd.com/read/38527035/hmgr-and-chs-gene-cloning-characterizations-and-tissue-specific-expressions-in-polygala-tenuifolia-willd
#31
JOURNAL ARTICLE
Yang Liu, Xiaofang Ma, Fuying Mao, Jinmiao Qiu, Jingyi Bi, Xiaowei Li, Xian Gu, Yuguang Zheng, Yunsheng Zhao
Triterpenoid saponins and flavonoids have several pharmacological activities against P. tenuifolia. The 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) and chalcone synthase (CHS) are the rate-limiting enzymes of triterpenoid saponin and flavonoid biosynthesis, respectively. In this study, HMGR and CHS genes were cloned from P. tenuifolia, and their bioinformatics analyses and tissue-specific expression were investigated. The results showed that the HMGR and CHS genes were successfully cloned, separately named the PtHMGR gene (NCBI accession: MK424118) and PtCHS gene (NCBI accession: MK424117)...
2024: PloS One
https://read.qxmd.com/read/38523609/analyzing-the-causal-relationship-between-lipid-lowering-drug-target-genes-and-epilepsy-a-mendelian-randomization-study
#32
JOURNAL ARTICLE
Shicun Huang, Yuan Liu, Yi Zhang, Yiqing Wang, Ya Gao, Runnan Li, Lidong Yu, Xiaowei Hu, Qi Fang
BACKGROUND: Previous research has yielded conflicting results on the link between epilepsy risk and lipid-lowering medications. The aim of this study is to determine whether the risk of epilepsy outcomes is causally related to lipid-lowering medications predicted by genetics. METHODS: We used genetic instruments as proxies to the exposure of lipid-lowering drugs, employing variants within or near genes targeted by these drugs and associated with low-density lipoprotein cholesterol (LDL cholesterol) from a genome-wide association study...
2024: Frontiers in Neurology
https://read.qxmd.com/read/38522713/early-statin-exposure-influences-cardiac-and-skeletal-development-with-implications-for-ion-channel-transcriptomes-in-zebrafish
#33
JOURNAL ARTICLE
Ying Zhao, Hou-Zhi Yang, Huinan Li, Shuang Liang, Meng Wang, Chun-Di Li, Donghai Zhuo, Feifei Fan, Miao Guo, Xinxin Lv, Lingzhu Zhang, Xu Chen, Shan-Shan Li, Xin Jin
Statins, widely prescribed for cholesterol management by inhibiting HMG-CoA reductase in the cholesterol biosynthesis pathway, may also influence vertebrate development. In this study, we investigated the developmental effects of two widely used statins, atorvastatin (ATO) and pravastatin (PRA), on zebrafish offspring. For ATO, we administered doses classified as low (1 μM), medium (5 μM), and high (10 μM), while for PRA, the corresponding concentrations were set at low (18 μM), medium (180 μM), and high (270 μM)...
March 22, 2024: Comparative Biochemistry and Physiology. Toxicology & Pharmacology: CBP
https://read.qxmd.com/read/38522316/diterpenoid-honatisine-overcomes-temozolomide-resistance-in-glioblastoma-by-inducing-mitonuclear-protein-imbalance-through-disruption-of-tfam-mediated-mtdna-transcription
#34
JOURNAL ARTICLE
Zongyang Li, Ke Sai, Guoxu Ma, Fanfan Chen, Xudong Xu, Lei Chen, Sicen Wang, Weiping Li, Guodong Huang, Ping Cui
BACKGROUND: Glioblastoma (GBM) represents as the most formidable intracranial malignancy. The systematic exploration of natural compounds for their potential applications in GBM therapy has emerged as a pivotal and fruitful avenue of research. PURPOSE: In the present study, a panel of 96 diterpenoids was systematically evaluated as a repository of potential antitumour agents. The primary objective was to discern their potency in overcoming resistance to temozolomide (TMZ)...
December 29, 2023: Phytomedicine
https://read.qxmd.com/read/38520741/pah-deficient-pathology-in-humanized-c-1066-11g-a-phenylketonuria-mice
#35
JOURNAL ARTICLE
Ainhoa Martínez-Pizarro, Sara Picó, Arístides López-Márquez, Claudia Rodriguez-López, Elena Montalvo, Mar Alvarez, Margarita Castro, Santiago Ramón-Maiques, Belén Pérez, José J Lucas, Eva Richard, Lourdes R Desviat
We have generated using CRISPR/Cas9 technology a partially humanized mouse model of the neurometabolic disease phenylketonuria (PKU), carrying the highly prevalent PAH variant c.1066-11G>A. This variant creates an alternative 3' splice site, leading to the inclusion of 9 nucleotides coding for 3 extra amino acids between Q355 and Y356 of the protein. Homozygous Pah c.1066-11A mice, with a partially humanized intron 10 sequence with the variant, accurately recapitulate the splicing defect and present almost undetectable hepatic PAH activity...
March 23, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38520738/real-world-evidence-risdiplam-in-a-patient-with-spinal-muscular-atrophy-type-i-with-a-novel-splicing-mutation-and-one-smn2-copy
#36
JOURNAL ARTICLE
Kai Ma, Kaihui Zhang, Defang Chen, Chuan Wang, Mohnad Abdalla, Haozheng Zhang, Rujin Tian, Yang Liu, Li Song, Xinyi Zhang, Fangfang Liu, Guohua Liu, Dong Wang
Spinal muscular atrophy (SMA), which results from the deletion or/and mutation in the SMN1 gene, is an autosomal recessive neuromuscular disorder that leads to weakness and muscle atrophy. SMN2 is a paralogous gene of SMN1. SMN2 copy number affects the severity of SMA, but its role in patients treated with disease modifying therapies is unclear. The most appropriate individualized treatment for SMA has not yet been determined. Here, we reported a case of SMA type I with normal breathing and swallowing function...
March 23, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38517996/mechanisms-underlying-the-therapeutic-effects-of-xiaoyaosan-in-treating-hyperplasia-of-mammary-glands-based-on-network-pharmacology
#37
JOURNAL ARTICLE
Peizhe Li, Yuxing Tai, Long Zhang, Sixian Wang, Qifan Guan, Xin Li, Shaowei Liu, Mingjun Liu
This study utilized network pharmacology to investigate the effects of Xiaoyaosan (XYS) on the intervention of hyperplasia of mammary glands (HMG) by targeting specific genes and signaling pathways. The active ingredients and targets of XYS, which consisted of 8 traditional Chinese medicines (TCM), were identified using TCMSP. The gene targets associated with HMG were obtained from the GeneCards Database, and the intersection data between the 2 was integrated. Cytoscape 3.8.1 software was used to construct a network diagram illustrating the relationship between compounds, drug active ingredients, target proteins, and the disease...
March 22, 2024: Medicine (Baltimore)
https://read.qxmd.com/read/38513732/role-of-interleukin-6-signaling-pathway-in-the-anti-inflammatory-effects-of-statins-on-coronary-artery-disease-evidence-from-mendelian-randomization-analysis
#38
JOURNAL ARTICLE
Mojgan Yazdanpanah, Nahid Yazdanpanah, Mojtaba Chardoli, Abbas Dehghan
BACKGROUND: Statins are currently widely used in the prevention of coronary artery disease (CAD) primarily for lipid-lowering with a potential anti-inflammatory effect. However, it is not clear if their potential anti-inflammatory effects are mediated through the interleukin 6 (IL-6) signaling pathway. METHODS: Using the Mendelian randomization (MR) approach followed by multivariable MR analyses, we examined the extent to which the effects of statins on CAD might be mediated through the IL-6 signaling pathway...
March 19, 2024: International Journal of Cardiology
https://read.qxmd.com/read/38513029/repeated-co-option-of-hmg-box-genes-for-sex-determination-in-brown-algae-and-animals
#39
JOURNAL ARTICLE
Rémy Luthringer, Morgane Raphalen, Carla Guerra, Sébastien Colin, Claudia Martinho, Min Zheng, Masakazu Hoshino, Yacine Badis, Agnieszka P Lipinska, Fabian B Haas, Josué Barrera-Redondo, Vikram Alva, Susana M Coelho
In many eukaryotes, genetic sex determination is not governed by XX/XY or ZW/ZZ systems but by a specialized region on the poorly studied U (female) or V (male) sex chromosomes. Previous studies have hinted at the existence of a dominant male-sex factor on the V chromosome in brown algae, a group of multicellular eukaryotes distantly related to animals and plants. The nature of this factor has remained elusive. Here, we demonstrate that an HMG-box gene acts as the male-determining factor in brown algae, mirroring the role HMG-box genes play in sex determination in animals...
March 22, 2024: Science
https://read.qxmd.com/read/38512067/correction-to-atp13a2-park9-regulates-endo-lysosomal-cargo-sorting-and-proteostasis-through-a-novel-pi-3-5-p2-mediated-scaffolding-function
#40
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March 21, 2024: Human Molecular Genetics
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