keyword
https://read.qxmd.com/read/38691389/gene-expression-programs-in-mammalian-spermatogenesis
#1
REVIEW
Chunsheng Han
Mammalian spermatogenesis, probably the most complex of all cellular developmental processes, is an ideal model both for studying the specific mechanism of gametogenesis and for understanding the basic rules governing all developmental processes, as it entails both cell type-specific and housekeeping molecular processes. Spermatogenesis can be viewed as a mission with many tasks to accomplish, and its success is genetically programmed and ensured by the collaboration of a large number of genes. Here, I present an overview of mammalian spermatogenesis and the mechanisms underlying each step in the process, covering the cellular and molecular activities that occur at each developmental stage and emphasizing their gene regulation in light of recent studies...
April 15, 2024: Development
https://read.qxmd.com/read/38691188/branching-topology-of-the-human-embryo-transcriptome-revealed-by-entropy-sort-feature-weighting
#2
JOURNAL ARTICLE
Arthur Radley, Stefan Boeing, Austin Smith
Analysis of single cell transcriptomics (scRNA-seq) data is typically performed after sub-setting to highly variable genes (HVGs). Here we show that Entropy Sorting provides an alternative mathematical framework for feature selection. On synthetic datasets, continuous entropy sort feature weighting (cESFW) outperforms HVG selection in distinguishing cell state specific genes. We apply cESFW to six merged scRNA-seq datasets spanning human early embryo development. Without smoothing or augmenting the raw counts matrices, cESFW generates a high-resolution embedding displaying coherent developmental progression from 8-cell to post-implantation stages and delineating 15 distinct cell states...
May 1, 2024: Development
https://read.qxmd.com/read/38690566/temporal-regulation-of-the-mediator-complex-during-muscle-proliferation-differentiation-regeneration-aging-and-disease
#3
JOURNAL ARTICLE
Dominic W Kolonay, Kristina M Sattler, Corinne Strawser, Jill Rafael-Fortney, Maria M Mihaylova, Katherine E Miller, Christoph Lepper, Kedryn K Baskin
Genesis of skeletal muscle relies on the differentiation and fusion of mono-nucleated muscle progenitor cells into the multi-nucleated muscle fiber syncytium. The temporally-controlled cellular and morphogenetic changes underlying this process are initiated by a series of highly coordinated transcription programs. At the core, the myogenic differentiation cascade is driven by muscle-specific transcription factors, i.e., the Myogenic Regulatory Factors (MRFs). Despite extensive knowledge on the function of individual MRFs, very little is known about how they are coordinated...
2024: Frontiers in Cell and Developmental Biology
https://read.qxmd.com/read/38690517/expansion-of-human-umbilical-cord-derived-mesenchymal-stem-cells-in-regenerative-medicine
#4
JOURNAL ARTICLE
Shafiqa Naeem Rajput, Bushra Kiran Naeem, Anwar Ali, Asmat Salim, Irfan Khan
BACKGROUND: Stem cells are undifferentiated cells that possess the potential for self-renewal with the capacity to differentiate into multiple lineages. In humans, their limited numbers pose a challenge in fulfilling the necessary demands for the regeneration and repair of damaged tissues or organs. Studies suggested that mesenchymal stem cells (MSCs), necessary for repair and regeneration via transplantation, require doses ranging from 10 to 400 million cells. Furthermore, the limited expansion of MSCs restricts their therapeutic application...
April 26, 2024: World Journal of Stem Cells
https://read.qxmd.com/read/38690516/biological-scaffold-as-potential-platforms-for-stem-cells-current-development-and-applications-in-wound-healing
#5
REVIEW
Jie-Yu Xiang, Lin Kang, Zi-Ming Li, Song-Lu Tseng, Li-Quan Wang, Tian-Hao Li, Zhu-Jun Li, Jiu-Zuo Huang, Nan-Ze Yu, Xiao Long
Wound repair is a complex challenge for both clinical practitioners and researchers. Conventional approaches for wound repair have several limitations. Stem cell-based therapy has emerged as a novel strategy to address this issue, exhibiting significant potential for enhancing wound healing rates, improving wound quality, and promoting skin regeneration. However, the use of stem cells in skin regeneration presents several challenges. Recently, stem cells and biomaterials have been identified as crucial components of the wound-healing process...
April 26, 2024: World Journal of Stem Cells
https://read.qxmd.com/read/38690295/mesenchymal-stem-cells-in-craniofacial-reconstruction-a-comprehensive-review
#6
REVIEW
Zizhuo Zheng, Hanghang Liu, Shibo Liu, En Luo, Xian Liu
Craniofacial reconstruction faces many challenges, including high complexity, strong specificity, severe injury, irregular and complex wounds, and high risk of bleeding. Traditionally, the "gold standard" for treating craniofacial bone defects has been tissue transplantation, which involves the transplantation of bone, cartilage, skin, and other tissues from other parts of the body. However, the shape of craniofacial bone and cartilage structures varies greatly and is distinctly different from ordinary long bones...
2024: Frontiers in Molecular Biosciences
https://read.qxmd.com/read/38690266/protection-of-neutrophils-by-bone-marrow-mesenchymal-stromal-cells-is-enhanced-by-tumor-associated-inflammatory-cytokines
#7
JOURNAL ARTICLE
Yingqi Liang, Xiulan Lou, Yazhang Xu, Zhiyuan Zheng
Mesenchymal stromal/stem cells (MSCs), which are distributed in many tissues including bone marrow, have been reported to play a critical role in tumor development. While bone marrow, the primary site for hematopoiesis, is important for establishing the immune system, whether MSCs in the bone marrow can promote tumor growth via influencing hematopoiesis remains unclear. We observed that the numbers of MSCs and neutrophils were increased in bone marrow in tumor-bearing mice. Moreover, co-culture assay showed that MSCs strongly protected neutrophils from apoptosis and induced their maturation...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38690080/pleiotropic-physiological-functions-of-piezo1-in-human-body-and-its-effect-on-malignant-behavior-of-tumors
#8
REVIEW
Yihan Zhang, Wen Zou, Wenlei Dou, Hongliang Luo, Xi Ouyang
Mechanosensitive ion channel protein 1 (Piezo1) is a large homotrimeric membrane protein. Piezo1 has various effects and plays an important and irreplaceable role in the maintenance of human life activities and homeostasis of the internal environment. In addition, recent studies have shown that Piezo1 plays a vital role in tumorigenesis, progression, malignancy and clinical prognosis. Piezo1 is involved in regulating the malignant behaviors of a variety of tumors, including cellular metabolic reprogramming, unlimited proliferation, inhibition of apoptosis, maintenance of stemness, angiogenesis, invasion and metastasis...
2024: Frontiers in Physiology
https://read.qxmd.com/read/38690063/tracheobronchomalacia-following-allogeneic-haematopoietic-stem-cell-transplantation
#9
Pitirat Panpruang, Dararat Eksombatchai, Viboon Boonsarngsuk
Tracheobronchomalacia (TBM) occurs due to the weakening of cartilaginous part of the trachea, resulting in compromised airway function and leading to symptoms such as dyspnea, cough, and inability to clear secretions. Bronchiolitis obliterans syndrome (BOS) is the most prevalent late noninfectious pulmonary complication in patients who underwent allogeneic haematopoietic stem cell transplantation (HSCT). Therefore, patients experiencing progressive dyspnea and chronic cough after allogenic HSCT, with new obstructive pattern on pulmonary function test, are typically diagnosed with post-transplant BOS...
May 2024: Respirology Case Reports
https://read.qxmd.com/read/38689819/recurrent-diffuse-alveolar-hemorrhage-and-extracorporeal-membrane-oxygenation-utilization-in-a-hematopoietic-stem-cell-transplant-patient-with-hunter-s-syndrome
#10
Nasreen Noor, Gene Peir, Ásdís Finnsdóttir Wagner, Jay Rilinger, Jenna Miller
We describe the natural history of a three-month-old patient with Hunter Syndrome with hematopoietic stem cell transplant (HSCT) who developed recurrent diffuse alveolar hemorrhage (DAH) requiring extracorporeal membrane oxygenation (ECMO). The patient underwent HSCT with several complications, including veno-occlusive disease and DAH. He was managed with ECMO. Unfortunately, despite initial success he developed recurrent DAH and ultimately died. This is a novel report of this severe adverse event requiring ECMO following the use of HSCT in this rare patient population...
2024: Archive of clinical cases
https://read.qxmd.com/read/38689715/gene-regulatory-network-analysis-identifies-myl1-mdh2-gls-and-trim28-as-the-principal-proteins-in-the-response-of-mesenchymal-stem-cells-to-mg-2-ions
#11
JOURNAL ARTICLE
Jalil Nourisa, Antoine Passemiers, Farhad Shakeri, Maryam Omidi, Heike Helmholz, Daniele Raimondi, Yves Moreau, Sven Tomforde, Hartmuth Schlüter, Bérengère Luthringer-Feyerabend, Christian J Cyron, Roland C Aydin, Regine Willumeit-Römer, Berit Zeller-Plumhoff
Magnesium (Mg)-based implants have emerged as a promising alternative for orthopedic applications, owing to their bioactive properties and biodegradability. As the implants degrade, Mg2+ ions are released, influencing all surrounding cell types, especially mesenchymal stem cells (MSCs). MSCs are vital for bone tissue regeneration, therefore, it is essential to understand their molecular response to Mg2+ ions in order to maximize the potential of Mg-based biomaterials. In this study, we conducted a gene regulatory network (GRN) analysis to examine the molecular responses of MSCs to Mg2+ ions...
December 2024: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/38689657/development-of-composite-functional-tissue-sheets-using-hipsc-cms-and-hadscs-to-improve-the-cardiac-function-after-myocardial-infarction
#12
JOURNAL ARTICLE
Jingbo Zhang, Junjun Li, Xiang Qu, Yuting Liu, Lifu Sun, Akima Harada, Ying Hua, Nagako Sougawa, Akiko Tabata, Li Liu, Shigeru Miyagawa
Human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) have been widely used in therapy of ischemic heart disease. However, there are still remaining issues that limit the therapeutic efficacy, such as immune rejection and low retention of hiPSC-CMs. Human adipose mesenchymal stromal cells (hADSCs) have been reported to be able to regulate the immune response, promote angiogenesis and promote the maturation of hiPSC-CMs. In this study, we co-cultured these two types of cells on fiber scaffold made of biodegradable poly (D,L-lactic- co -glycolic acid) (PLGA) polymer for several days to develop a composited 3D cardiac tissue sheet...
July 2024: Bioactive Materials
https://read.qxmd.com/read/38689103/survival-after-hematopoietic-stem-cell-transplantation-in-severe-combined-immunodeficiency-scid-a-worldwide-review-of-the-prognostic-variables
#13
REVIEW
Gabriela Assunção Goebel, Cíntia Silva de Assis, Luciana Araújo Oliveira Cunha, Fernanda Gontijo Minafra, Jorge Andrade Pinto
This study aims to perform an extensive review of the literature that evaluates various factors that affect the survival rates of patients with severe combined immunodeficiency (SCID) after hematopoietic stem cell transplantation (HSCT) in developed and developing countries. An extensive search of the literature was made in four different databases (PubMed, Embase, Scopus, and Web of Science). The search was carried out in December 2022 and updated in July 2023, and the terms such as "hematopoietic stem cell transplantation," "bone marrow transplant," "mortality," "opportunistic infections," and "survival" associated with "severe combined immunodeficiency" were sought based on the MeSH terms...
April 30, 2024: Clinical Reviews in Allergy & Immunology
https://read.qxmd.com/read/38689080/human-umbilical-cord-mesenchymal-stem-cells-derived-exosomes-improved-the-aged-mouse-ivm-oocytes-quality
#14
JOURNAL ARTICLE
Jiangnan Song, Xinmeng Guo, Bolun Zhang, Qian Zhang, Yibing Han, Dandan Cao, Yuanqing Yao
During assisted reproductive technology (ART) treatment, the aged women, especially those over 35 years old, have fewer mature oocytes and poorer quality of the oocytes comparing with the young women. In vitro maturation (IVM) technology facilitates the usage of immature oocytes, which is clinically important for the aged women. However, the maturation rate is low for the oocytes from the aged women. Human umbilical cord mesenchymal stem cells derived exosomes (HUCMSCs-exosomes), as important mediators of intercellular communication, have been widely used to restore ovarian function and improve female fertility...
April 30, 2024: Reproductive Sciences
https://read.qxmd.com/read/38688981/development-of-a-novel-high-throughput-culture-system-for-hypoxic-3d-hydrogel-cell-culture
#15
JOURNAL ARTICLE
Dominik Egger, Luisa Baier, Julia Moldaschl, Manfred Taschner, Volker Lorber, Cornelia Kasper
Animal models lack physiologic relevance to the human system which results in low clinical translation of results derived from animal testing. Besides spheroids or organoids, hydrogel-based 3D in vitro models are used to mimic the in vivo situation increasing the relevance while reducing animal testing. However, to establish hydrogel-based 3D models in applications such as drug development or personalized medicine, high-throughput culture systems are required. Furthermore, the integration of oxygen-reduced (hypoxic) conditions has become increasingly important to establish more physiologic culture models...
April 30, 2024: Scientific Reports
https://read.qxmd.com/read/38688902/a-case-of-t-cell-acute-lymphoblastic-leukemia-in-retroviral-gene-therapy-for-ada-scid
#16
JOURNAL ARTICLE
Daniela Cesana, Maria Pia Cicalese, Andrea Calabria, Pietro Merli, Roberta Caruso, Monica Volpin, Laura Rudilosso, Maddalena Migliavacca, Federica Barzaghi, Claudia Fossati, Francesco Gazzo, Simone Pizzi, Andrea Ciolfi, Alessandro Bruselles, Francesca Tucci, Giulio Spinozzi, Giulia Pais, Fabrizio Benedicenti, Matteo Barcella, Ivan Merelli, Pierangela Gallina, Stefania Giannelli, Francesca Dionisio, Serena Scala, Miriam Casiraghi, Luisa Strocchio, Luciana Vinti, Lucia Pacillo, Eleonora Draghi, Marcella Cesana, Sara Riccardo, Chiara Colantuono, Emmanuelle Six, Marina Cavazzana, Filippo Carlucci, Manfred Schmidt, Caterina Cancrini, Fabio Ciceri, Luca Vago, Davide Cacchiarelli, Bernhard Gentner, Luigi Naldini, Marco Tartaglia, Eugenio Montini, Franco Locatelli, Alessandro Aiuti
Hematopoietic stem cell gene therapy (GT) using a γ-retroviral vector (γ-RV) is an effective treatment for Severe Combined Immunodeficiency due to Adenosine Deaminase deficiency. Here, we describe a case of GT-related T-cell acute lymphoblastic leukemia (T-ALL) that developed 4.7 years after treatment. The patient underwent chemotherapy and haploidentical transplantation and is currently in remission. Blast cells contain a single vector insertion activating the LIM-only protein 2 (LMO2) proto-oncogene, confirmed by physical interaction, and low Adenosine Deaminase (ADA) activity resulting from methylation of viral promoter...
April 30, 2024: Nature Communications
https://read.qxmd.com/read/38688897/identifying-tumor-type-and-cell-type-specific-gene-expression-alterations-in-pediatric-central-nervous-system-tumors
#17
JOURNAL ARTICLE
Min Kyung Lee, Nasim Azizgolshani, Joshua A Shapiro, Lananh N Nguyen, Fred W Kolling, George J Zanazzi, Hildreth Robert Frost, Brock C Christensen
Central nervous system (CNS) tumors are the leading cause of pediatric cancer death, and these patients have an increased risk for developing secondary neoplasms. Due to the low prevalence of pediatric CNS tumors, major advances in targeted therapies have been lagging compared to other adult tumors. We collect single nuclei RNA-seq data from 84,700 nuclei of 35 pediatric CNS tumors and three non-tumoral pediatric brain tissues and characterize tumor heterogeneity and transcriptomic alterations. We distinguish cell subpopulations associated with specific tumor types including radial glial cells in ependymomas and oligodendrocyte precursor cells in astrocytomas...
April 30, 2024: Nature Communications
https://read.qxmd.com/read/38688788/novel-self-setting-cements-based-on-tricalcium-silicate-%C3%AE-tricalcium-phosphate-monocalcium-phosphate-anhydrous-hydroxypropyl-methylcellulose-from-hydration-mechanism-to-biological-evaluations
#18
JOURNAL ARTICLE
Meng Wu, Laijun Xu, Fei Xing, Rongjun Xiao, Wangping Wu
Despite the clinical success of tricalcium silicate (TCS)-based materials in endodontics, the inferior handling characteristic, poor anti-washout property and slow setting kinetics hindered their wider applications. To solve these problems, an injectable fast-setting TCS/β-tricalcium phosphate/monocalcium phosphate anhydrous (β-TCP/MCPA) cement was developed for the first time by incorporation of hydroxypropyl methylcellulose (HPMC) and β-TCP/MCPA. The physical-chemical characterization (setting time, anti-washout property, injectability, compressive strength, apatite mineralization and sealing property) of TCS/(β-TCP/MCPA) were conducted...
April 16, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38688681/the-lncrna-malat1-is-trafficked-to-the-cytoplasm-as-a-localized-mrna-encoding-a-small-peptide-in-neurons
#19
JOURNAL ARTICLE
Wen Xiao, Reem Halabi, Chia-Ho Lin, Mohammad Nazim, Kyu-Hyeon Yeom, Douglas L Black
Synaptic function in neurons is modulated by local translation of mRNAs that are transported to distal portions of axons and dendrites. The metastasis-associated lung adenocarcinoma transcript 1 ( MALAT1 ) is broadly expressed across cell types, almost exclusively as a nuclear long noncoding RNA. We found that in differentiating neurons, a portion of Malat1 RNA redistributes to the cytoplasm. Depletion of Malat1 using antisense oligonucleotides (ASOs) stimulates the expression of particular pre- and postsynaptic proteins, implicating Malat1 in their regulation...
April 30, 2024: Genes & Development
https://read.qxmd.com/read/38688472/resveratrol-promotes-the-differentiation-of-human-umbilical-cord-mesenchymal-stem-cells-into-esophageal-fibroblasts-via-akt-signaling-pathway
#20
JOURNAL ARTICLE
Xiujing Chen, Zihao Sun, Qian Wu, Lijuan Shao, Jiaxin Bei, Yiguang Lin, Hongjie Chen, Size Chen
Objectives: Resveratrol has been implicated in the differentiation and development of human umbilical cord mesenchymal stem cells. The differentiation of into esophageal fibroblasts is a promising strategy for esophageal tissue engineering. However, the pharmacological effect and underlying mechanism of resveratrol on human umbilical cord mesenchymal stem cells differentiation are unknown. Here, we investigated the effects and mechanism of resveratrol on the differentiation of human umbilical cord mesenchymal stem cells...
2024: International Journal of Immunopathology and Pharmacology
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