journal
https://read.qxmd.com/read/38570533/acidovorax-temperans-skews-neutrophil-maturation-and-polarizes-th17-cells-to-promote-lung-adenocarcinoma-development
#1
JOURNAL ARTICLE
Joshua K Stone, Natalia von Muhlinen, Chenran Zhang, Ana I Robles, Amy L Flis, Eleazar Vega-Valle, Akihiko Miyanaga, Masaru Matsumoto, K Leigh Greathouse, Tomer Cooks, Giorgio Trinchieri, Curtis C Harris
Change within the intratumoral microbiome is a common feature in lung and other cancers and may influence inflammation and immunity in the tumor microenvironment, affecting growth and metastases. We previously characterized the lung cancer microbiome in patients and identified Acidovorax temperans as enriched in tumors. Here, we instilled A. temperans in an animal model driven by mutant K-ras and Tp53. This revealed A. temperans accelerates tumor development and burden through infiltration of proinflammatory cells...
April 3, 2024: Oncogenesis
https://read.qxmd.com/read/38453884/riok3-sustains-colorectal-cancer-cell-survival-under-glucose-deprivation-via-an-hsp90%C3%AE-dependent-pathway
#2
JOURNAL ARTICLE
Nan Zhang, Lu Dong, Tingting Ning, Feng Du, Mengran Zhao, Junxuan Xu, Sian Xie, Si Liu, Xiujing Sun, Peng Li, Shutian Zhang, Shengtao Zhu
Glucose oxidation via the pentose phosphate pathway serves as the primary cellular mechanism for generating nicotinamide adenine dinucleotide phosphate (NADPH). The central regions of solid tumors typically experience glucose deficiency, emphasizing the need for sustained NADPH production crucial to tumor cell survival. This study highlights the crucial role of RIOK3 in maintaining NADPH production and colorectal cancer (CRC) cell survival during glucose deficiency. Our findings revealed upregulated RIOK3 expression upon glucose deprivation, with RIOK3 knockout significantly reducing cancer cell survival...
March 7, 2024: Oncogenesis
https://read.qxmd.com/read/38429288/designing-patient-oriented-combination-therapies-for-acute-myeloid-leukemia-based-on-efficacy-toxicity-integration-and-bipartite-network-modeling
#3
JOURNAL ARTICLE
Mehdi Mirzaie, Elham Gholizadeh, Juho J Miettinen, Filipp Ianevski, Tanja Ruokoranta, Jani Saarela, Mikko Manninen, Susanna Miettinen, Caroline A Heckman, Mohieddin Jafari
Acute myeloid leukemia (AML), a heterogeneous and aggressive blood cancer, does not respond well to single-drug therapy. A combination of drugs is required to effectively treat this disease. Computational models are critical for combination therapy discovery due to the tens of thousands of two-drug combinations, even with approved drugs. While predicting synergistic drugs is the focus of current methods, few consider drug efficacy and potential toxicity, which are crucial for treatment success. To find effective new drug candidates, we constructed a bipartite network using patient-derived tumor samples and drugs...
March 1, 2024: Oncogenesis
https://read.qxmd.com/read/38424455/progesterone-receptor-potentiates-macropinocytosis-through-cdc42-in-pancreatic-ductal-adenocarcinoma
#4
JOURNAL ARTICLE
Ying-Na Liao, Yan-Zhi Gai, Li-Heng Qian, Hong Pan, Yi-Fan Zhang, Pin Li, Ying Guo, Shu-Xin Li, Hui-Zhen Nie
Endocrine receptors play an essential role in tumor metabolic reprogramming and represent a promising therapeutic avenue in pancreatic ductal adenocarcinoma (PDAC). PDAC is characterized by a nutrient-deprived microenvironment. To meet their ascendant energy demands, cancer cells can internalize extracellular proteins via macropinocytosis. However, the roles of endocrine receptors in macropinocytosis are not clear. In this study, we found that progesterone receptor (PGR), a steroid-responsive nuclear receptor, is highly expressed in PDAC tissues obtained from both patients and transgenic LSL-KrasG12D/+ ; LSL-Trp53R172H/+ ; PDX1-cre (KPC) mice...
February 29, 2024: Oncogenesis
https://read.qxmd.com/read/38418838/pkc-independent-pi3k-signalling-diminishes-pkc-inhibitor-sensitivity-in-uveal-melanoma
#5
JOURNAL ARTICLE
John J Park, Sabine Abou Hamad, Ashleigh Stewart, Matteo S Carlino, Su Yin Lim, Helen Rizos
Protein kinase C (PKC) is activated downstream of gain-of-function GNAQ or GNA11 (GNAQ/GNA11) mutations in over 90% of uveal melanoma (UM). Phase I clinical trials of PKC inhibitors have shown modest response rates with no survival benefit in metastatic UM. Although PKC inhibitors actively suppress mitogen-activated protein kinase (MAPK) signalling in UM, the effect on other UM signalling cascades is not well understood. We examined the transcriptome of UM biopsies collected pre- and post-PKC inhibitor therapy and confirmed that MAPK, but not PI3K/AKT signalling, was inhibited early during treatment with the second-generation PKC inhibitor IDE196...
February 28, 2024: Oncogenesis
https://read.qxmd.com/read/38316768/ddx3x-interacts-with-sirt7-to-promote-pd-l1-expression-to-facilitate-pdac-progression
#6
JOURNAL ARTICLE
Tianming Zhao, Hanlong Zhu, Tianhui Zou, Si Zhao, Lin Zhou, Muhan Ni, Feng Liu, Hao Zhu, Xiaotan Dou, Jian Di, Bing Xu, Lei Wang, Xiaoping Zou
Pancreatic ductal adenocarcinoma (PDAC) is recognized as the most aggressive and fatal malignancy. A previous study reported that PDAC patients who exhibit elevated levels of DDX3X have a poor prognosis and low overall survival rate. However, the underlying molecular mechanism remains unclear. This study aimed to investigate the specific roles of DDX3X in PDAC. Multiple bioinformatics analyses were used to evaluate DDX3X expression and its potential role in PDAC. In vitro and in vivo studies were performed to assess the effects of DDX3X on PDAC cell growth...
February 5, 2024: Oncogenesis
https://read.qxmd.com/read/38272902/preneoplastic-cells-switch-to-warburg-metabolism-from-their-inception-exposing-multiple-vulnerabilities-for-targeted-elimination
#7
JOURNAL ARTICLE
Henna Myllymäki, Lisa Kelly, Abigail M Elliot, Roderick N Carter, Jeanette Astorga Johansson, Kai Yee Chang, Justyna Cholewa-Waclaw, Nicholas M Morton, Yi Feng
Otto Warburg described tumour cells as displaying enhanced aerobic glycolysis whilst maintaining defective oxidative phosphorylation (OXPHOS) for energy production almost 100 years ago [1, 2]. Since then, the 'Warburg effect' has been widely accepted as a key feature of rapidly proliferating cancer cells [3-5]. What is not clear is how early "Warburg metabolism" initiates in cancer and whether changes in energy metabolism might influence tumour progression ab initio. We set out to investigate energy metabolism in the HRASG12V driven preneoplastic cell (PNC) at inception, in a zebrafish skin PNC model...
January 25, 2024: Oncogenesis
https://read.qxmd.com/read/38272870/lubac-promotes-angiogenesis-and-lung-tumorigenesis-by-ubiquitinating-and-antagonizing-autophagic-degradation-of-hif1%C3%AE
#8
JOURNAL ARTICLE
Ying Jin, Yazhi Peng, Jie Xu, Ye Yuan, Nan Yang, Zemei Zhang, Lei Xu, Lin Li, Yulian Xiong, Dejiao Sun, Yamu Pan, Ruiqing Wu, Jian Fu
Hypoxia-inducible factor 1 (HIF1) is critically important for driving angiogenesis and tumorigenesis. Linear ubiquitin chain assembly complex (LUBAC), the only known ubiquitin ligase capable of catalyzing protein linear ubiquitination to date, is implicated in cell signaling and associated with cancers. However, the role and mechanism of LUBAC in regulating the expression and function of HIF1α, the labile subunit of HIF1, remain to be elucidated. Herein we showed that LUBAC increases HIF1α protein expression in cultured cells and tissues of human lung cancer and enhances HIF1α DNA-binding and transcriptional activities, which are dependent upon LUBAC enzymatic activity...
January 25, 2024: Oncogenesis
https://read.qxmd.com/read/38199982/correction-trim11-facilitates-chemoresistance-in-nasopharyngeal-carcinoma-by-activating-the-%C3%AE-catenin-abcc9-axis-via-p62-selective-autophagic-degradation-of-daple
#9
Runa Zhang, Si-Wei Li, Lijuan Liu, Jun Yang, Guofu Huang, Yi Sang
No abstract text is available yet for this article.
January 10, 2024: Oncogenesis
https://read.qxmd.com/read/38191593/a-cyclin-d1-intrinsically-disordered-domain-accesses-modified-histone-motifs-to-govern-gene-transcription
#10
JOURNAL ARTICLE
Xuanmao Jiao, Gabriele Di Sante, Mathew C Casimiro, Agnes Tantos, Anthony W Ashton, Zhiping Li, Yen Quach, Dharmendra Bhargava, Agnese Di Rocco, Claudia Pupo, Marco Crosariol, Tamas Lazar, Peter Tompa, Chenguang Wang, Zuoren Yu, Zhao Zhang, Kawthar Aldaaysi, Ratna Vadlamudi, Monica Mann, Emmanuel Skordalakes, Andrew Kossenkov, Yanming Du, Richard G Pestell
The essential G1 -cyclin, CCND1, is frequently overexpressed in cancer, contributing to tumorigenesis by driving cell-cycle progression. D-type cyclins are rate-limiting regulators of G1 -S progression in mammalian cells via their ability to bind and activate CDK4 and CDK6. In addition, cyclin D1 conveys kinase-independent transcriptional functions of cyclin D1. Here we report that cyclin D1 associates with H2BS14 via an intrinsically disordered domain (IDD). The same region of cyclin D1 was necessary for the induction of aneuploidy, induction of the DNA damage response, cyclin D1-mediated recruitment into chromatin, and CIN gene transcription...
January 8, 2024: Oncogenesis
https://read.qxmd.com/read/38191478/smyd3-promotes-endometrial-cancer-through-epigenetic-regulation-of-lig4-xrcc4-xlf-complex-in-non-homologous-end-joining-repair
#11
JOURNAL ARTICLE
Yujia Huang, Ming Tang, Zhiyi Hu, Bailian Cai, Guofang Chen, Lijun Jiang, Yan Xia, Pujun Guan, Xiaoqi Li, Zhiyong Mao, Xiaoping Wan, Wen Lu
Endometrial cancer (EC) stands as one of the most prevalent malignancies affecting the female genital tract, witnessing a rapid surge in incidence globally. Despite the well-established association of histone methyltransferase SMYD3 with the development and progression of various cancers, its specific oncogenic role in endometrial cancer remains unexplored. In the present study, we report that the expression level of SMYD3 is significantly upregulated in EC samples and associated with EC progression. Through meticulous in vivo and in vitro experiments, we reveal that depletion of SMYD3 curtails cell proliferation, migration, and invasion capabilities, leading to compromised non-homologous end joining repair (NHEJ) and heightened sensitivity of EC cells to radiation...
January 8, 2024: Oncogenesis
https://read.qxmd.com/read/38177125/transcriptomic-analysis-identifies-b-lymphocyte-kinase-as-a-therapeutic-target-for-desmoplastic-small-round-cell-tumor-cancer-stem-cell-like-cells
#12
JOURNAL ARTICLE
Justin W Magrath, Dane A Flinchum, Alifiani B Hartono, Shruthi Sanjitha Sampath, Tina M O'Grady, Melody Baddoo, Liang Haoyang, Xiaojiang Xu, Erik K Flemington, Sean B Lee
Desmoplastic small round cell tumor (DSRCT) is an aggressive pediatric cancer caused by the EWSR1-WT1 fusion oncoprotein. The tumor is refractory to treatment with a 5-year survival rate of only 15-25%, necessitating the development of novel therapeutics, especially those able to target chemoresistant subpopulations. Novel in vitro cancer stem cell-like (CSC-like) culture conditions increase the expression of stemness markers (SOX2, NANOG) and reduce DSRCT cell line susceptibility to chemotherapy while maintaining the ability of DSRCT cells to form xenografts...
January 4, 2024: Oncogenesis
https://read.qxmd.com/read/38172609/cell-competition-and-cancer-from-drosophila-to-mammals
#13
REVIEW
Bojie Cong, Ross L Cagan
Throughout an individual's life, somatic cells acquire cancer-associated mutations. A fraction of these mutations trigger tumour formation, a phenomenon partly driven by the interplay of mutant and wild-type cell clones competing for dominance; conversely, other mutations function against tumour initiation. This mechanism of 'cell competition', can shift clone dynamics by evaluating the relative status of clonal populations, promoting 'winners' and eliminating 'losers'. This review examines the role of cell competition in the context of tumorigenesis, tumour progression and therapeutic intervention...
January 3, 2024: Oncogenesis
https://read.qxmd.com/read/38062028/programmed-cell-death-11-modulates-but-not-entirely-relies-on-p53-hdm2-loop-to-facilitate-g2-m-transition-in-colorectal-cancer-cells
#14
JOURNAL ARTICLE
Li Ding, Yujie Xu, Lin Xu, Chenhong Zhao, Zhiping Zhang, Jie Zhang, Kai Liao, Yuerou Chen, Jingwen Li, Xinyu Mei, Xinyue Zhang
We previously described a nucleolar protein RSL1D1 but distributed throughout the nucleus in HCT116 colorectal cancer (CRC) cells to facilitate G1/S transition by inhibiting p53 signaling. Here, we found another nucleolar protein, programmed cell death 11 (PDCD11), also with an "Extra-nucleolar" localization in CRC cells but to regulate G2/M checkpoint. This protein directly interacts with p53 and HDM2 in the nucleoplasm, thereby recruiting p53 to HDM2 for ubiquitination and degradation. The ensuing downregulation of p53 increases the CDK1 level to help the cells pass G2/M checkpoint...
December 7, 2023: Oncogenesis
https://read.qxmd.com/read/37985752/identifying-a-locus-in-super-enhancer-and-its-resident-nfe2l1-mafg-as-transcriptional-factors-that-drive-pd-l1-expression-and-immune-evasion
#15
JOURNAL ARTICLE
Conglin Shi, Liuting Chen, Hui Pi, Henglu Cui, Chenyang Fan, Fangzheng Tan, Xuanhao Qu, Rong Sun, Fengbo Zhao, Yihua Song, Yuanyuan Wu, Miaomiao Chen, Wenkai Ni, Lishuai Qu, Renfang Mao, Yihui Fan
Although the transcriptional regulation of the programmed death ligand 1 (PD-L1) promoter has been extensively studied, the transcription factor residing in the PD-L1 super-enhancer has not been comprehensively explored. Through saturated CRISPR-Cas9 screening of the core region of the PD-L1 super-enhancer, we have identified a crucial genetic locus, referred to as locus 22, which is essential for PD-L1 expression. Locus 22 is a potential binding site for NFE2:MAF transcription factors. Although genetic silencing of NRF2 (NFE2L2) did not result in a reduction of PD-L1 expression, further analysis reveals that MAFG and NFE2L1 (NRF1) play a critical role in the expression of PD-L1...
November 20, 2023: Oncogenesis
https://read.qxmd.com/read/37973791/nf-%C3%AE%C2%BAb-signaling-activation-and-roles-in-thyroid-cancers-implication-of-map3k14-nik
#16
JOURNAL ARTICLE
Françoise Cormier, Selma Housni, Florent Dumont, Mélodie Villard, Béatrix Cochand-Priollet, Françoise Mercier-Nomé, Karine Perlemoine, Jérôme Bertherat, Lionel Groussin
Among follicular-derived thyroid cancers (TC), those with aggressive behavior and resistance to current treatments display poor prognosis. NF-κB signaling pathways are involved in tumor progression of various cancers. Here, we finely characterize the NF-κB pathways and their involvement in TC. By using immunoblot and gel shift assays, we demonstrated that both classical and alternative NF-κB pathways are activated in ten TC-derived cell lines, leading to activated RelA/p50 and RelB/p50 NF-κB dimers...
November 16, 2023: Oncogenesis
https://read.qxmd.com/read/37957153/kinesin-family-member-18b-activates-mtorc1-signaling-via-actin-gamma-1-to-promote-the-recurrence-of-human-hepatocellular-carcinoma
#17
JOURNAL ARTICLE
Qian Li, Mengqing Sun, Yao Meng, Mengqing Feng, Menglan Wang, Cunjie Chang, Heng Dong, Fangtian Bu, Chao Xu, Jing Liu, Qi Ling, Yiting Qiao, Jianxiang Chen
The mechanistic target of rapamycin complex 1 (mTORC1) signaling pathway is frequently reported to be hyperactivated in hepatocellular carcinoma (HCC) and contributes to HCC recurrence. However, the underlying regulatory mechanisms of mTORC1 signaling in HCC are not fully understood. In the present study, we found that the expression of kinesin family member 18B (KIF18B) was positively correlated with mTORC1 signaling in HCC, and the upregulation of KIF18B and p-mTOR was associated with a poor prognosis and HCC recurrence...
November 13, 2023: Oncogenesis
https://read.qxmd.com/read/37949862/coordinate-transcriptional-regulation-of-erbb2-3-by-c-terminal-binding-protein-2-signals-sensitivity-to-erbb2-inhibition-in-pancreatic-adenocarcinoma
#18
JOURNAL ARTICLE
Kranthi Kumar Chougoni, Haemin Park, Priyadarshan K Damle, Travis Mason, Bo Cheng, Martin M Dcona, Barbara Szomju, Mikhail G Dozmorov, Michael O Idowu, Steven R Grossman
There is a critical need to identify new therapeutic vulnerabilities in pancreatic ductal adenocarcinoma (PDAC). Transcriptional co-regulators C-terminal binding proteins (CtBP) 1 and 2 are highly overexpressed in human PDAC, and CRISPR-based homozygous deletion of Ctbp2 in a mouse PDAC cell line (CKP) dramatically decreased tumor growth, reduced metastasis, and prolonged survival in orthotopic mouse allografts. Transcriptomic profiling of tumors derived from CKP vs. Ctbp2-deleted CKP cells (CKP/KO) revealed significant downregulation of the EGFR-superfamily receptor Erbb3, the heterodimeric signaling partner for both EGFR and ErbB2...
November 10, 2023: Oncogenesis
https://read.qxmd.com/read/37938233/correction-pbk-phosphorylates-msl1-to-elicit-epigenetic-modulation-of-cd276-in-nasopharyngeal-carcinoma
#19
Meng-Yao Wang, Bin Qi, Fang Wang, Zhi-Rui Lin, Ming-Yi Li, Wen-Jing Yin, Yan-Yi Zhu, Lu He, Yi Yu, Fang Yang, Jin-Quan Liu, Dong-Ping Chen
No abstract text is available yet for this article.
November 8, 2023: Oncogenesis
https://read.qxmd.com/read/37932309/combined-in-vitro-in-vivo-genome-wide-crispr-screens-in-triple-negative-breast-cancer-identify-cancer-stemness-regulators-in-paclitaxel-resistance
#20
JOURNAL ARTICLE
Gang Yan, Meiou Dai, Sophie Poulet, Ni Wang, Julien Boudreault, Girija Daliah, Suhad Ali, Jean-Jacques Lebrun
Triple negative breast cancer (TNBC) is defined as lacking the expressions of estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2). TNBC patients exhibit relatively poor clinical outcomes due to lack of molecular markers for targeted therapies. As such chemotherapy often remains the only systemic treatment option for these patients. While chemotherapy can initially help shrink TNBC tumor size, patients eventually develop resistance to drug, leading to tumor recurrence...
November 6, 2023: Oncogenesis
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