journal
https://read.qxmd.com/read/38449531/bacterial-lactonases-zena-with-noncanonical-structural-features-hydrolyze-the-mycotoxin-zearalenone
#21
JOURNAL ARTICLE
Sebastian Fruhauf, Dominic Pühringer, Michaela Thamhesl, Patricia Fajtl, Elisavet Kunz-Vekiru, Andreas Höbartner-Gussl, Gerd Schatzmayr, Gerhard Adam, Jiri Damborsky, Kristina Djinovic-Carugo, Zbynek Prokop, Wulf-Dieter Moll
Zearalenone (ZEN) is a mycoestrogenic polyketide produced by Fusarium graminearum and other phytopathogenic members of the genus Fusarium . Contamination of cereals with ZEN is frequent, and hydrolytic detoxification with fungal lactonases has been explored. Here, we report the isolation of a bacterial strain, Rhodococcus erythropolis PFA D8-1, with ZEN hydrolyzing activity, cloning of the gene encoding α/β hydrolase ZenA encoded on the linear megaplasmid pSFRL1, and biochemical characterization of nine homologues...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38449530/evolution-of-phosphorylase-activity-in-an-ancestral-glycosyltransferase
#22
JOURNAL ARTICLE
Jorick Franceus, José Pablo Rivas-Fernández, Jolien Lormans, Carme Rovira, Tom Desmet
The reconstruction of ancestral sequences can offer a glimpse into the fascinating process of molecular evolution by exposing the adaptive pathways that shape the proteins found in nature today. Here, we track the evolution of the carbohydrate-active enzymes responsible for the synthesis and turnover of mannogen, a critical carbohydrate reserve in Leishmania parasites. Biochemical characterization of resurrected enzymes demonstrated that mannoside phosphorylase activity emerged in an ancestral bacterial mannosyltransferase, and later disappeared in the process of horizontal gene transfer and gene duplication in Leishmania ...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38449529/distinct-site-motifs-activate-o-2-and-h-2-on-supported-au-nanoparticles-in-liquid-water
#23
JOURNAL ARTICLE
Jason S Adams, Haoyu Chen, Tomas Ricciardulli, Sucharita Vijayaraghavan, Abinaya Sampath, David W Flaherty
Au nanoparticles catalyze the activation and conversion of small molecules with rates and kinetic barriers that depend on the dimensions of the nanoparticle, composition of the support, and presence of catalytically culpable water molecules that solvate these interfaces. Here, molecular interpretations of steady-state rate measurements, kinetic isotope effects, and structural characterizations reveal how the interface of Au nanoparticles, liquid water, and metal oxide supports mediate the kinetically relevant activation of H2 and sequential reduction of O2 -derived intermediates during the formation of H2 O2 and H2 O...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38449528/snapshots-of-the-reaction-coordinate-of-a-thermophilic-2-deoxyribonucleoside-ribonucleoside-transferase
#24
JOURNAL ARTICLE
Peijun Tang, Christopher J Harding, Alison L Dickson, Rafael G da Silva, David J Harrison, Clarissa Melo Czekster
Nucleosides are ubiquitous to life and are required for the synthesis of DNA, RNA, and other molecules crucial for cell survival. Despite the notoriously difficult organic synthesis of nucleosides, 2'-deoxynucleoside analogues can interfere with natural DNA replication and repair and are successfully employed as anticancer, antiviral, and antimicrobial compounds. Nucleoside 2'-deoxyribosyltransferase (dNDT) enzymes catalyze transglycosylation via a covalent 2'-deoxyribosylated enzyme intermediate with retention of configuration, having applications in the biocatalytic synthesis of 2'-deoxynucleoside analogues in a single step...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38449527/sustainable-electrosynthesis-of-cyclohexanone-oxime-through-nitrate-reduction-on-a-zn-cu-alloy-catalyst
#25
JOURNAL ARTICLE
Jonathan Sharp, Anna Ciotti, Hayley Andrews, Shaktiswaran R Udayasurian, Max García-Melchor, Tengfei Li
Cyclohexanone oxime is an important precursor for Nylon-6 and is typically synthesized via the nucleophilic addition-elimination of hydroxylamine with cyclohexanone. Current technologies for hydroxylamine production are, however, not environment-friendly due to the requirement of harsh reaction conditions. Here, we report an electrochemical method for the one-pot synthesis of cyclohexanone oxime under ambient conditions with aqueous nitrate as the nitrogen source. A series of Zn-Cu alloy catalysts are developed to drive the electrochemical reduction of nitrate, where the hydroxylamine intermediate formed in the electroreduction process can undergo a chemical reaction with the cyclohexanone present in the electrolyte to produce the corresponding oxime...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38449526/importance-of-site-diversity-and-connectivity-in-electrochemical-co-reduction-on-cu
#26
JOURNAL ARTICLE
Chansol Kim, Nitish Govindarajan, Sydney Hemenway, Junho Park, Anya Zoraster, Calton J Kong, Rajiv Ramanujam Prabhakar, Joel B Varley, Hee-Tae Jung, Christopher Hahn, Joel W Ager
Electrochemical CO2 reduction on Cu is a promising approach to produce value-added chemicals using renewable feedstocks, yet various Cu preparations have led to differences in activity and selectivity toward single and multicarbon products. Here, we find, surprisingly, that the effective catalytic activity toward ethylene improves when there is a larger fraction of less active sites acting as reservoirs of *CO on the surface of Cu nanoparticle electrocatalysts. In an adaptation of chemical transient kinetics to electrocatalysis, we measure the dynamic response of a gas diffusion electrode (GDE) cell when the feed gas is abruptly switched between Ar (inert) and CO...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38449525/catch-and-release-the-assembly-immobilization-and-recycling-of-redox-reversible-artificial-metalloenzymes
#27
JOURNAL ARTICLE
Alex H Miller, Elena V Blagova, Benjamin Large, Rosalind L Booth, Keith S Wilson, Anne-K Duhme-Klair
Technologies to improve the applicability of artificial metalloenzymes (ArMs) are gaining considerable interest; one such approach is the immobilization of these biohybrid catalysts on support materials to enhance stability and enable their retention, recovery, and reuse. Here, we describe the immobilization of polyhistidine-tagged ArMs that allow the redox-controlled replacement of catalytic cofactors that have lost activity, e.g., due to poisoning or decomposition, on immobilized metal affinity chromatography resins...
March 1, 2024: ACS Catalysis
https://read.qxmd.com/read/38384945/flavin-mediated-photocatalysis-provides-a-general-platform-for-sulfide-c-h-functionalization
#28
JOURNAL ARTICLE
Alex S Anderton, Oliver J Knowles, James A Rossi-Ashton, David J Procter
Functionalized sulfides are important in many areas of science, ranging from chemical biology through drug discovery to organic materials chemistry. Sulfides bearing pendant reactive groups in the α-position are particularly useful; however, methods for the selective valorization of simple sulfides or the late-stage functionalization of complex sulfides by the convenient addition of valuable functionality are underexplored. Here we exemplify a general reaction platform for sulfide functionalization by showcasing three modes of α-sulfur C-H functionalization; cyanation, alkenylation, and alkynylation...
February 16, 2024: ACS Catalysis
https://read.qxmd.com/read/38384944/photoredox-driven-three-component-coupling-of-aryl-halides-olefins-and-o-2
#29
JOURNAL ARTICLE
Mark C Maust, Simon B Blakey
Modern organic synthesis requires methodologies that bring together abundant feedstock chemicals in a mild and efficient manner. To aid in this effort, we have developed a multicomponent radical hydroxyarylation reaction that utilizes aryl halides, olefins, and O2 as the reaction components. Crucial to this advance was an oxidative, rather than a reductive, approach to aryl radical generation, which enables reaction tolerance to O2 . This methodology displays a broad functional group tolerance with a variety of functionalized aryl halides and a broad array of olefins...
February 16, 2024: ACS Catalysis
https://read.qxmd.com/read/38384943/oxygen-18-labeling-defines-a-ferric-peroxide-compound-0-mechanism-in-the-oxidative-deformylation-of-aldehydes-by-cytochrome-p450-2b4
#30
JOURNAL ARTICLE
Yasuhiro Tateishi, Kevin D McCarty, Martha V Martin, F Peter Guengerich
Most cytochrome P450 (P450) oxidations are considered to occur with the active oxidant being a perferryl oxygen (FeO3+ , Compound I). However, a ferric peroxide (FeO2 ® , Compound 0) mechanism has been proposed, as well, particularly for aldehyde substrates. We investigated three of these systems, the oxidative deformylation of the model substrates citronellal, 2-phenylpropionaldehyde, and 2-methyl-2-phenylpropionaldehyde by rabbit P450 2B4, using 18 O labeling. The formic acid product contained one 18 O derived from 18 O2 , which is indicative of a dominant Compound 0 mechanism...
February 16, 2024: ACS Catalysis
https://read.qxmd.com/read/38384942/metal-support-interaction-between-titanium-oxynitride-and-pt-nanoparticles-enables-efficient-low-pt-loaded-high-performance-electrodes-at-relevant-oxygen-reduction-reaction-current-densities
#31
JOURNAL ARTICLE
Armin Hrnjić, Ana Rebeka Kamšek, Lazar Bijelić, Anja Logar, Nik Maselj, Milutin Smiljanić, Jan Trputec, Natan Vovk, Luka Pavko, Francisco Ruiz-Zepeda, Marjan Bele, Primož Jovanovič, Nejc Hodnik
In the present work, we report on a synergistic relationship between platinum nanoparticles and a titanium oxynitride support (TiO x N y /C) in the context of oxygen reduction reaction (ORR) catalysis. As demonstrated herein, this composite configuration results in significantly improved electrocatalytic activity toward the ORR relative to platinum dispersed on carbon support (Pt/C) at high overpotentials. Specifically, the ORR performance was assessed under an elevated mass transport regime using the modified floating electrode configuration, which enabled us to pursue the reaction closer to PEMFC-relevant current densities...
February 16, 2024: ACS Catalysis
https://read.qxmd.com/read/38384941/mechanochemical-coupling-of-catalysis-and-motion-in-a-cellulose-degrading-multienzyme-nanomachine
#32
JOURNAL ARTICLE
Krisztina Zajki-Zechmeister, Manuel Eibinger, Gaurav Singh Kaira, Bernd Nidetzky
The cellulosome is a megadalton-size protein complex that functions as a biological nanomachine of cellulosic fiber degradation. We show that the cellulosome behaves as a Brownian ratchet that rectifies protein motions on the cellulose surface into a propulsion mechanism by coupling to the hydrolysis of cellulose chains. Movement on cellulose fibrils is unidirectional and results from "macromolecular crawl" composed of dynamic switches between elongated and compact spatial arrangements of enzyme subunits. Deletion of the main exocellulase Cel48S eliminates conformational bias for aligning the subunits to the long fibril axis, which we reveal as crucial for optimum coupling between directional movement and substrate degradation...
February 16, 2024: ACS Catalysis
https://read.qxmd.com/read/38384940/comprehensive-density-functional-and-kinetic-monte-carlo-study-of-co-2-hydrogenation-on-a-well-defined-ni-ceo-2-model-catalyst-role-of-eley-rideal-reactions
#33
JOURNAL ARTICLE
Pablo Lozano-Reis, Pablo Gamallo, Ramón Sayós, Francesc Illas
A detailed multiscale study of the mechanism of CO2 hydrogenation on a well-defined Ni/CeO2 model catalyst is reported that couples periodic density functional theory (DFT) calculations with kinetic Monte Carlo (kMC) simulations. The study includes an analysis of the role of Eley-Rideal elementary steps for the water formation step, which are usually neglected on the overall picture of the mechanism, catalytic activity, and selectivity. The DFT calculations for the chosen model consisting of a Ni4 cluster supported on CeO2 (111) show large enough adsorption energies along with low energy barriers that suggest this catalyst to be a good option for high selective CO2 methanation...
February 16, 2024: ACS Catalysis
https://read.qxmd.com/read/38327648/al-iii-k-i-heterodinuclear-polymerization-catalysts-showing-fast-rates-and-high-selectivity-for-polyester-polyols
#34
JOURNAL ARTICLE
Edward J K Shellard, Wilfred T Diment, Diego A Resendiz-Lara, Francesca Fiorentini, Georgina L Gregory, Charlotte K Williams
Low molar mass, hydroxyl end-capped polymers, often termed "polyols," are widely used to make polyurethanes, resins, and coatings and as surfactants in liquid formulations. Epoxide/anhydride ring-opening copolymerization (ROCOP) is a controlled polymerization route to make them, and its viability depends upon catalyst selection. In the catalysis, the polyester polyol molar masses and end-groups are controlled by adding specific but excess quantities of diols (vs catalyst), known as the chain transfer agent (CTA), to the polymerizations, but many of the best current catalysts are inhibited or even deactivated by alcohols...
February 2, 2024: ACS Catalysis
https://read.qxmd.com/read/38327647/poisoning-of-pt-%C3%AE-al-2-o-3-aqueous-phase-reforming-catalysts-by-ketone-and-diketone-derived-surface-species
#35
JOURNAL ARTICLE
Bryan J Hare, Ricardo A Garcia Carcamo, Luke L Daemen, Yongqiang Cheng, Rachel B Getman, Carsten Sievers
Strong adsorption of ketone and diketone byproducts and their fragmentation products during the aqueous phase reforming of biomass derived oxygenates is believed to be responsible for the deactivation of supported Pt catalysts. This study involves a combined experimental and theoretical approach to demonstrate the interactions of several model di/ketone poisons with Pt/γ-Al2 O3 catalysts. Particular di/ketones were selected to reveal the effects of hydroxyl groups (acetone, hydroxyacetone), conjugation with C=C bonds (mesityl oxide), intramolecular distance between carbonyls in diketones (2,3-butanedione, 2,4-pentanedione), and length of terminal alkyl chains (3,4-hexanedione)...
February 2, 2024: ACS Catalysis
https://read.qxmd.com/read/38327646/screening-cu-zeolites-for-methane-activation-using-curriculum-based-training
#36
JOURNAL ARTICLE
Jiawei Guo, Tyler Sours, Sam Holton, Chenghan Sun, Ambarish R Kulkarni
Machine learning (ML), when used synergistically with atomistic simulations, has recently emerged as a powerful tool for accelerated catalyst discovery. However, the application of these techniques has been limited by the lack of interpretable and transferable ML models. In this work, we propose a curriculum-based training (CBT) philosophy to systematically develop reactive machine learning potentials (rMLPs) for high-throughput screening of zeolite catalysts. Our CBT approach combines several different types of calculations to gradually teach the ML model about the relevant regions of the reactive potential energy surface...
February 2, 2024: ACS Catalysis
https://read.qxmd.com/read/38327645/the-impact-of-oxygen-surface-coverage-and-carbidic-carbon-on-the-activity-and-selectivity-of-two-dimensional-molybdenum-carbide-2d-mo-2-c-in-fischer-tropsch-synthesis
#37
JOURNAL ARTICLE
Evgenia Kountoupi, Alan J Barrios, Zixuan Chen, Christoph R Müller, Vitaly V Ordomsky, Aleix Comas-Vives, Alexey Fedorov
Transformations of oxygenates (CO2 , CO, H2 O, etc.) via Mo2 C-based catalysts are facilitated by the high oxophilicity of the material; however, this can lead to the formation of oxycarbides and complicate the identification of the (most) active catalyst state and active sites. In this context, the two-dimensional (2D) MXene molybdenum carbide Mo2 C T x ( T x are passivating surface groups) contains only surface Mo sites and is therefore a highly suitable model catalyst for structure-activity studies. Here, we report that the catalytic activity of Mo2 C T x in Fischer-Tropsch (FT) synthesis increases with a decreasing coverage of surface passivating groups (mostly O*)...
February 2, 2024: ACS Catalysis
https://read.qxmd.com/read/38327644/correction-to-iterative-dual-metal-and-energy-transfer-catalysis-enables-stereodivergence-in-alkyne-difunctionalization-carboboration-as-case-study
#38
Javier Corpas, Miguel Gomez-Mendoza, Enrique M Arpa, Víctor A de la Peña O'Shea, Bo Durbeej, Juan C Carretero, Pablo Mauleón, Ramón Gómez Arrayás
[This corrects the article DOI: 10.1021/acscatal.3c03570.].
February 2, 2024: ACS Catalysis
https://read.qxmd.com/read/38327643/deciphering-the-unconventional-reduction-of-c-n-bonds-by-old-yellow-enzymes-using-qm-mm
#39
JOURNAL ARTICLE
Amit Singh Sahrawat, Nakia Polidori, Wolfgang Kroutil, Karl Gruber
The reduction of C=X (X = N, O) bonds is a cornerstone in both synthetic organic chemistry and biocatalysis. Conventional reduction mechanisms usually involve a hydride ion targeting the less electronegative carbon atom. In a departure from this paradigm, our investigation into Old Yellow Enzymes (OYEs) reveals a mechanism involving transfer of hydride to the formally more electronegative nitrogen atom within a C=N bond. Beyond their known ability to reduce electronically activated C=C double bonds, e.g., in α, β-unsaturated ketones, these enzymes have recently been shown to reduce α-oximo-β-ketoesters to the corresponding amines...
February 2, 2024: ACS Catalysis
https://read.qxmd.com/read/38327642/modular-synthesis-of-complex-benzoxaboraheterocycles-through-chelation-assisted-rh-catalyzed-2-2-2-cycloaddition
#40
JOURNAL ARTICLE
John M Halford-McGuff, Marek Varga, David B Cordes, Aidan P McKay, Allan J B Watson
Benzoxaboraheterocycles (BOBs) are moieties of increasing interest in the pharmaceutical industry; however, the synthesis of these compounds is often difficult or impractical due to the sensitivity of the boron moiety, the requirement for metalation-borylation protocols, and lengthy syntheses. We report a straightforward, modular approach that enables access to complex examples of the BOB framework through a Rh-catalyzed [2 + 2 + 2] cycloaddition using MIDA-protected alkyne boronic acids. The key to the development of this methodology was overcoming the steric barrier to catalysis by leveraging chelation assistance...
February 2, 2024: ACS Catalysis
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