Annual Review of Marine Science

Heterotrophic nanoflagellates are the main consumers of bacteria and picophytoplankton in the ocean and thus play a key role in ocean biogeochemistry. They are found in all major branches of the eukaryotic tree of life but are united by all being equipped with one or a few flagella that they use to generate a feeding current. These microbial predators are faced with the challenges that viscosity at this small scale impedes predator-prey contact and that their foraging activity disturbs the ambient water and thus attracts their own flow-sensing predators...

The biodiversity of the plankton has been interpreted largely through the monocle of competition. The spatial distancing of phytoplankton in nature is so large that cell boundary layers rarely overlap, undermining opportunities for resource-based competitive exclusion. Neutral theory accounts for biodiversity patterns based purely on random birth, death, immigration, and speciation events and has commonly served as a null hypothesis in terrestrial ecology but has received comparatively little attention in aquatic ecology...

Fine-scale currents, O (1-100 km, days-months), are actively involved in the transport and transformation of biogeochemical tracers in the ocean. However, their overall impact on large-scale biogeochemical cycling on the timescale of years remains poorly understood due to the multiscale nature of the problem. Here, we summarize these impacts and critically review current estimates. We examine how eddy fluxes and upscale connections enter into the large-scale balance of biogeochemical tracers. We show that the overall contribution of eddy fluxes to primary production and carbon export may not be as large as it is for oxygen ventilation...

Marine transgression associated with rising sea levels causes coastal erosion, landscape transitions, and displacement of human populations globally. This process takes two general forms. Along open-ocean coasts, active transgression occurs when sediment-delivery rates are unable to keep pace with accommodation creation, leading to wave-driven erosion and/or landward translation of coastal landforms. It is highly visible, rapid, and limited to narrow portions of the coast. In contrast, passive transgression is subtler and slower, and impacts broader areas...

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The modes of Pacific decadal-scale variability (PDV), traditionally defined as statistical patterns of variance, reflect to first order the ocean's integration (i.e., reddening) of atmospheric forcing that arises from both a shift and a change in strength of the climatological (time-mean) atmospheric circulation. While these patterns concisely describe PDV, they do not distinguish among the key dynamical processes driving the evolution of PDV anomalies, including atmospheric and ocean teleconnections and coupled feedbacks with similar spatial structures that operate on different timescales...

To thrive in nutrient-poor waters, coral reefs must retain and recycle materials efficiently. This review centers microbial processes in facilitating the persistence and stability of coral reefs, specifically the role of these processes in transforming and recycling the dissolved organic matter (DOM) that acts as an invisible central currency in reef production, nutrient cycling, and organismal interactions. The defining characteristics of coral reefs, including high productivity, balanced metabolism, high biodiversity, nutrient recycling efficiency, and structural complexity, are inextricably linked to microbial processing of DOM...

The micronutrient iron plays a major role in setting the magnitude and distribution of primary production across the global ocean. As such, an understanding of the sources, sinks, and internal cycling processes that drive the oceanic distribution of iron is key to unlocking iron's role in the global carbon cycle and climate, both today and in the geologic past. Iron isotopic analyses of seawater have emerged as a transformative tool for diagnosing iron sources to the ocean and tracing biogeochemical processes...

The biological pump transports organic matter, created by phytoplankton productivity in the well-lit surface ocean, to the ocean's dark interior, where it is consumed by animals and heterotrophic microbes and remineralized back to inorganic forms. This downward transport of organic matter sequesters carbon dioxide from exchange with the atmosphere on timescales of months to millennia, depending on where in the water column the respiration occurs. There are three primary export pathways that link the upper ocean to the interior: the gravitational, migrant, and mixing pumps...

Understanding the nature of organic matter flux in the ocean remains a major goal of oceanography because it impacts some of the most important processes in the ocean. Sinking particles are important for carbon dioxide removal from the atmosphere and its movement to the deep ocean. They also feed life below the ocean's productive surface and sustain life in the deep sea, in addition to depositing organic matter on the seafloor. However, the magnitude of all of these processes is dependent on the transformation of sinking particles during their journey through the water column...

Releases of anthropogenic radionuclides from European nuclear fuel reprocessing plants enter the surface circulation of the high-latitude North Atlantic and are transported northward into the Arctic Ocean and southward from the Nordic Seas into the deep North Atlantic, thereby providing tracers of water circulation, mixing, ventilation, and deep-water formation. Early tracer studies focused on 137 Cs, which revealed some of the first significant insights into the Arctic Ocean circulation, while more recent work has benefited from advances in accelerator mass spectrometry to enable the measurement of the conservative, long-lived radionuclide tracers 129 I and 236 U...

I am a child of Sputnik, the satellite launched by the Soviet Union in 1957. That event created opportunities for me to escape the horrors of apartheid by emigrating from South Africa to the United States. There, fortuitously, I was given excellent opportunities to explore how an interplay between the waves and currents influences climate variability, from interannual El Niño events to millennial ice ages. During my career, I also witnessed intriguing facets of the interactions between the profoundly different worlds of science and of human affairs...

The regular movements of waves and tides are obvious representations of the oceans' rhythmicity. But the rhythms of marine life span across ecological niches and timescales, including short (in the range of hours) and long (in the range of days and months) periods. These rhythms regulate the physiology and behavior of individuals, as well as their interactions with each other and with the environment. This review highlights examples of rhythmicity in marine animals and algae that represent important groups of marine life across different habitats...

Climatic extremes are becoming increasingly common against a background trend of global warming. In the oceans, marine heatwaves (MHWs)-discrete periods of anomalously warm water-have intensified and become more frequent over the past century, impacting the integrity of marine ecosystems globally. We review and synthesize current understanding of MHW impacts at the individual, population, and community levels. We then examine how these impacts affect broader ecosystem services and discuss the current state of research on biological impacts of MHWs...

Nitrogen is a major limiting element for biological productivity, and thus understanding past variations in N cycling is central to understanding past and future ocean biogeochemical cycling, global climate cycles, and biodiversity. Organic nitrogen encapsulated in fossil biominerals is generally protected from alteration, making it an important archive of the marine nitrogen cycle on seasonal to million-year timescales. The isotopic composition of fossil-bound nitrogen reflects variations in the large-scale nitrogen inventory, local sources and processing, and ecological and physiological traits of organisms...

Exchange of material across the nearshore region, extending from the shoreline to a few kilometers offshore, determines the concentrations of pathogens and nutrients near the coast and the transport of larvae, whose cross-shore positions influence dispersal and recruitment. Here, we describe a framework for estimating the relative importance of cross-shore exchange mechanisms, including winds, Stokes drift, rip currents, internal waves, and diurnal heating and cooling. For each mechanism, we define an exchange velocity as a function of environmental conditions...

The Arctic Ocean's Beaufort Gyre is a dominant feature of the Arctic system, a prominent indicator of climate change, and possibly a control factor for high-latitude climate. The state of knowledge of the wind-driven Beaufort Gyre is reviewed here, including its forcing, relationship to sea-ice cover, source waters, circulation, and energetics. Recent decades have seen pronounced change in all elements of the Beaufort Gyre system. Sea-ice losses have accompanied an intensification of the gyre circulation and increasing heat and freshwater content...

Lipids are structurally diverse biomolecules that serve multiple roles in cells. As such, they are used as biomarkers in the modern ocean and as paleoproxies to explore the geological past. Here, I review lipid geochemistry, biosynthesis, and compartmentalization; the varied uses of lipids as biomarkers; and the evolution of analytical techniques used to measure and characterize lipids. Advancements in high-resolution accurate-mass mass spectrometry have revolutionized the lipidomic and metabolomic fields, both of which are quickly being integrated into marine meta-omic studies...

Gender equity, providing for full participation of people of all genders in the oceanographic workforce, is an important goal for the continued success of the oceanographic enterprise. Here, we describe historical obstructions to gender equity; assess recent progress and the current status of gender equity in oceanography by examining quantitative measures of participation, achievement, and recognition; and review activities to improve gender equity. We find that women receive approximately half the oceanography PhDs in many parts of the world and are increasing in parity in earlier levels of academic employment...

Tidal marshes and mangroves are increasingly valued for nature-based mitigation of coastal storm impacts, such as flooding and shoreline erosion hazards, which are growing due to global change. As this review highlights, however, hazard mitigation by tidal wetlands is limited to certain conditions, and not all hazards are equally reduced. Tidal wetlands are effective in attenuating short-period storm-induced waves, but long-period storm surges, which elevate sea levels up to several meters for up to more than a day, are attenuated less effectively, or in some cases not at all, depending on storm conditions, wetland properties, and larger-scale coastal landscape geometry...