journal
https://read.qxmd.com/read/38624263/attention-deficit-hyperactivity-disorder-and-dopamine-receptor-d4-drd4-exon-3-variable-number-of-tandem-repeats-vntr-2-repeat-allele
#1
JOURNAL ARTICLE
Larry Baum, Chi Chiu Lee, Rui Ye, Yuanxin Zhong, Se Fong Hung, Chun Pan Tang, Ting Pong Ho, James M Swanson, Robert K Moyzis, Pak-Chung Sham, Patrick Wing-Leung Leung
To investigate the association of attention-deficit/hyperactivity disorder (ADHD) with the 48-base pair (bp) variable number of tandem repeats (VNTR) in exon 3 of the dopamine receptor D4 (DRD4) gene, we genotyped 240 ADHD patients and their parents from Hong Kong. The 4R allele was most common, followed by 2R. We examined association between the 2R allele (relative to 4R) and ADHD by Transmission Disequilibrium Test (TDT). The odds ratio (OR) (95% confidence interval) was 0.90 (0.64-1.3). The p-value was 0...
April 16, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38622954/genetic-variations-in-cyp2a6-cyp2e1-gstm1-gstt1-genes-and-the-risk-of-nasopharyngeal-carcinoma-in-north-african-population
#2
JOURNAL ARTICLE
Imane El Alami, Wafa Khaali, Majida Jalbout, Amina Gihbid, Wided Ben Ayoub, Abdellatif Benider, Selma Mohamed Brahim, Mokhtar Hamdi Cherif, Nadia Benchakroun, Mohammed El Mzibri, El Khalil Ben Driss, Khalid Belghmi, Marilys Corbex, Meriem Khyatti
BACKGROUND: Nasopharyngeal carcinoma (NPC) is a multifactorial malignancy associated with both genetic and environmental factors. Polymorphic deletions of the phase I and phase II genes involved in the detoxification of potential carcinogens may be a risk factor for nasopharyngeal carcinoma. In this study, we investigated the relationship between CYP2E1 (rs3813867), CYP2A6, GSTM1(rs1183423000) and GSTT1(rs1601993659) gene variations and NPC risk in North African countries with the highest incidence of NPC (Morocco, Algeria and Tunisia)...
April 15, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38622953/need-of-the-hour-genetic-and-genomic-testing-referrals-from-primary-healthcare-centers-with-inclusion-of-precision-medicine-in-pakistan
#3
LETTER
Muhammad Osama Siddiqui, Rabeet Tariq, Raman Kumar, Saira Mansoor
No abstract text is available yet for this article.
April 15, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38597250/a-historical-perspective-on-lionel-penrose-scientist-geneticist-and-dedicated-opponent-of-eugenics
#4
REVIEW
Maria Kiladi
The paper explores Lionel Penrose's scientific work. Penrose investigated the causes of mental disorders from clinical and genetic points of view. His investigations on phenylketonuria and Down syndrome helped to demonstrate the heterogenous character of mental disorders, whose causes can range from genetic with high penetrance, to largely environmental. He was specifically selected by JBS Haldane to become University College London's third Galton Chair as a result of his Colchester survey investigations. He became the first Galton Chair who had medical training...
April 10, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38563088/an-exploration-of-the-genetics-of-the-mutant-huntingtin-mhtt-gene-in-a-cohort-of-patients-with-chorea-from-different-ethnic-groups-in-sub-saharan-africa
#5
JOURNAL ARTICLE
Mendi J Muthinja, Carlos Othon Guelngar, Maouly Fall, Fatumah Jama, Huda Aldeen Shuja, Jamila Nambafu, Daniel Gams Massi, Oluwadamilola O Ojo, Njideka U Okubadejo, Funmilola Tolulope Taiwo, Alassane Mamadou Diop, Coudjou J D G de Chacus, Fodé Abass Cissé, Amara Cissé, Juzar Hooker, Dilraj Sokhi, Henry Houlden, Mie Rizig
BACKGROUND: Africans are underrepresented in Huntington's disease (HD) research. A European ancestor was postulated to have introduced the mutant Huntingtin (mHtt) gene to the continent; however, recent work has shown the existence of a unique Htt haplotype in South-Africa specific to indigenous Africans. OBJECTIVE: We aimed to investigate the CAG trinucleotide repeats expansion in the Htt gene in a geographically diverse cohort of patients with chorea and unaffected controls from sub-Saharan Africa...
April 2, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38517013/the-dawn-of-a-cure-for-sickle-cell-disease-through-crispr-based-treatment-a-critical-test-of-equity-in-public-health-genomics
#6
REVIEW
Gerald Mboowa, Ivan Sserwadda, Stephen Kanyerezi, Stephen Tukwasibwe, Benson Kidenya
Equity in access to genomic technologies, resources, and products remains a great challenge. This was evident especially during the coronavirus disease 2019 (COVID-19) pandemic when the majority of lower middle-income countries were unable to achieve at least 10% population vaccination coverage during initial COVID-19 vaccine rollouts, despite the rapid development of those vaccines. Sickle cell disease (SCD) is an inherited monogenic red blood cell disorder that affects hemoglobin, the protein that carries oxygen through the body...
March 22, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38517009/review-and-research-gap-identification-in-genetics-causes-of-syndromic-and-nonsyndromic-hearing-loss-in-saudi-arabia
#7
REVIEW
Faisal Almalki
Congenital hearing loss is one of the most common sensory disabilities worldwide. The genetic causes of hearing loss account for 50% of hearing loss. Genetic causes of hearing loss can be classified as nonsyndromic hearing loss (NSHL) or syndromic hearing loss (SHL). NSHL is defined as a partial or complete hearing loss without additional phenotypes; however, SHL, known as hearing loss, is associated with other phenotypes. Both types follow a simple Mendelian inheritance fashion. Several studies have been conducted to uncover the genetic factors contributing to NSHL and SHL in Saudi patients...
March 22, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38517001/using-drosophila-amyloid-toxicity-models-to-study-alzheimer-s-disease
#8
REVIEW
Elli Tsintzas, Teresa Niccoli
Alzheimer's disease (AD) is the most prevalent form of dementia and is characterised by a progressive loss of neurons, which manifests as gradual memory decline, followed by cognitive loss. Despite the significant progress in identifying novel biomarkers and understanding the prodromal pathology and symptomatology, AD remains a significant unmet clinical need. Lecanemab and aducanumab, the only Food and Drug Administration approved drugs to exhibit some disease-modifying clinical efficacy, target Aβ amyloid, underscoring the importance of this protein in disease aetiology...
March 22, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38488696/causal-effect-of-severe-and-non-severe-malaria-on-dyslipidemia-in-african-ancestry-individuals-a-mendelian-randomization-study
#9
JOURNAL ARTICLE
Mariam Traore, Harouna Sangare, Oudou Diabate, Abdoulaye Diawara, Cheickna Cissé, Oyekanmi Nashiru, Jian Li, Jeffrey Shaffer, Mamadou Wélé, Seydou Doumbia, Tinashe Chikowore, Opeyemi Soremekun, Segun Fatumo
BACKGROUND: Dyslipidemia is becoming prevalent in Africa, where malaria is endemic. Observational studies have documented the long-term protective effect of malaria on dyslipidemia; however, these study designs are prone to confounding. Therefore, we used Mendelian randomization (MR, a method robust to confounders and reverse causation) to determine the causal effect of severe malaria (SM) and the recurrence of non-severe malaria (RNM) on lipid traits. METHOD: We performed two-sample MR using genome wide association study (GWAS) summary statistics for recurrent non-severe malaria (RNM) from a Benin cohort (N = 775) and severe malaria from the MalariaGEN dataset (N = 17,000) and lipid traits from summary-level data of a meta-analyzed African lipid GWAS (MALG, N = 24,215) from the African Partnership for Chronic Disease Research (APCDR) (N = 13,612) and the Africa Wits-IN-DEPTH partnership for genomics studies (AWI-Gen) dataset (N = 10,603)...
March 15, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38369937/the-systematic-identification-of-survival-related-alternative-splicing-events-and-splicing-factors-in-glioblastoma
#10
JOURNAL ARTICLE
Tao Peng, Zhe Liu, Yu Zhang, Xudong Liu, Lijun Zhao, Ying Ma, Jinke Fan, Xinqiang Song, Lei Wang
Glioblastoma multiforme (GBM) is the most common and aggressive primary brain tumor, making it one of the most life-threatening human cancers. Nevertheless, research on the mechanism of action between alternative splicing (AS) and splicing factor (SF) or biomarkers in GBM is limited. AS is a crucial post-transcriptional regulatory mechanism. More than 95% of human genes undergo AS events. AS can diversify the expression patterns of genes, thereby increasing the diversity of proteins and playing a significant role in the occurrence and development of tumors...
February 19, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38369935/genetically-predicted-retinal-vascular-occlusion-in-relation-to-cardiovascular-diseases-a-bidirectional-two-sample-mendelian-randomization-analysis
#11
JOURNAL ARTICLE
Jun Zhang, Yiji Pan, Hongxia Yang, Shuqiong Hu, Sheng Zheng, Tao He
INTRODUCTION: Increasing evidence implicates retinal vascular occlusions as a susceptibility factor for cardiovascular diseases (CVDs), whereas inconsistent results on the relationship were reported in previous observational studies. This research using a bidirectional two-sample Mendelian randomization (MR) analysis aimed to investigate the potential association between genetically determined central/branch retinal artery and retinal vein occlusions (CRAO/BRAO/RVO) and the risk of CVD...
February 19, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38305494/association-of-blood-lipid-profiles-and-asthma-a-bidirectional-two-sample-mendelian-randomization-study
#12
JOURNAL ARTICLE
Yi-Shian Liu, Yu-Chun Lin, Meng-Chih Lin, Chao-Chien Wu, Tsu-Nai Wang
BACKGROUND: Observational studies and meta-analyses have indicated associations between blood lipid profiles and asthma. However, the causal association is unknown. Therefore, this study investigated the causal relationship between blood lipid profiles and asthma using bidirectional Mendelian randomization analysis. METHODS AND MATERIALS: Our analyses were performed using individual data from the Taiwan Biobank and summary statistics from the Asian Genetic Epidemiology Network (AGEN)...
February 2, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38196279/investigation-of-the-association-between-the-toll-like-receptor-1-rs4833095-variation-and-gastric-adenocarcinoma-recurrence
#13
JOURNAL ARTICLE
Yuan Dang, Jingyun Huang, Chen Lin, Shaohua Xu
BACKGROUND: Toll-like receptors (TLRs) are a family of transmembrane receptors that play key roles in identifying invading pathogens and activating innate immunity. TLR1 has been reported to be associated with the risk of gastric cancer (GC) but that was based on only a simple statistical analysis. METHODS: We genotyped the TLR1 in 526 GC patients to investigate the association between the variation and gastric cancer survival by the multiplex polymerase chain reaction and sequencing method...
January 9, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38192238/abca1-variant-rs9282541-is-associated-with-metabolic-syndrome-in-maya-children
#14
JOURNAL ARTICLE
Barbara I Peña-Espinoza, Emmanuel Torre-Horta, María G Ortiz-López, Marta Menjivar
INTRODUCTION: Metabolic syndrome (MetS) is a metabolic disorder encompassing risk factors for cardiovascular disease and type 2 diabetes (T2D). In Mexico, the MetS is a national health problem in adults and children. Environmental and genetic factors condition the MetS. However, studies to elucidate the contribution of genetic factors to MetS in Mexico are scarce. A recent study showed that variant rs9282541 (A-allele) in ATP-binding cassette transporter A1 (ABCA1) was associated with T2D in the Maya population in addition to low levels of high-density lipoprotein cholesterol (HDL-C)...
January 9, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38192234/nonsense-suppression-induces-read-through-of-a-novel-bmpr1a-variant-in-a-chinese-family-with-hereditary-colorectal-cancer
#15
JOURNAL ARTICLE
Zhaokun Wang, Jiaying Shi, Dachang Tao, Shengyu Xie, Yuan Yang, Yunqiang Liu
BACKGROUND: BMPR1A-mediated signaling transduction plays an essential role in intestinal growth. Variations of BMPR1A lead to a rare autosomal dominant inherited juvenile polyposis syndrome (JPS) with high probability of developing into colorectal cancer (CRC). Nonsense and frameshift variations, generating premature termination codons (PTCs), are the most pathogenic variants in the BMPR1A gene. OBJECTIVE: This study aimed to investigate the molecular genetic etiology in a Chinese family with three generations of CRC...
January 9, 2024: Annals of Human Genetics
https://read.qxmd.com/read/38161274/a-comprehensive-review-of-hvs-i-mitochondrial-dna-variation-of-19-iranian-populations
#16
REVIEW
Motahareh Amjadi, Zahra Hayatmehr, Balázs Egyed, Mahmood Tavallaei, Anna Szécsényi-Nagy
Iran is located along the Central Asian corridor, a natural artery that has served as a cross-continental route since the first anatomically modern human populations migrated out of Africa. We compiled and reanalyzed the HVS-I (hypervariable segment-I) of 3840 mitochondrial DNA (mtDNA) sequences from 19 Iranian populations and from 26 groups from adjacent countries to give a comprehensive review of the maternal genetic variation and investigate the impact of historical events and cultural factors on the maternal genetic structure of modern Iranians...
December 31, 2023: Annals of Human Genetics
https://read.qxmd.com/read/38161273/using-the-bayesian-variational-spike-and-slab-model-in-a-genome-wide-association-study-for-finding-associated-loci-with-bipolar-disorder
#17
JOURNAL ARTICLE
Maryam Kazemi Naeini, Mahdi Akbarzadeh, Iraj Kazemi, Doug Speed, Sayed Mohsen Hosseini
OBJECTIVE: The genome-wide association studies (GWAS) analysis, the most successful technique for discovering disease-related genetic variation, has some statistical concerns, including multiple testing, the correlation among variants (single-nucleotide polymorphisms) based on linkage disequilibrium and omitting the important variants when fitting the model with just one variant. To eliminate these problems in a small sample-size study, we used a sparse Bayesian learning model for finding bipolar disorder (BD) genetic variants...
December 31, 2023: Annals of Human Genetics
https://read.qxmd.com/read/38161272/exploring-the-clinical-significance-of-mir-148-expression-variations-in-distinct-subtypes-of-irritable-bowel-syndrome
#18
JOURNAL ARTICLE
Qun Ji, Fengxia Du, Yangyaxin Yu, Ying Li
Irritable bowel syndrome (IBS) belongs to chronic functional gastrointestinal diseases featured by abdominal pain and changes in bowel habits. This study aimed to investigate the clinical significance of serum miR-148 expression in different subtypes of IBS. We enrolled 86 IBS patients and 55 healthy controls. miR-148 expression levels were assessed in IBS patients classified into IBS-constipation (IBS-C), IBS-diarrhea (IBS-D), and IBS-mixed stool pattern (IBS-M) subtypes. Receiver-operating characteristic (ROC) curves were employed to evaluate the diagnostic potential of miR-148 in distinguishing among IBS subtypes...
December 31, 2023: Annals of Human Genetics
https://read.qxmd.com/read/38108658/molecular-and-computational-characterization-of-abcb11-and-abcg5-variants-in-tunisian-patients-with-neonatal-infantile-low-ggt-intrahepatic-cholestasis-genetic-diagnosis-and-genotype-phenotype-correlation-assessment
#19
JOURNAL ARTICLE
Boudour Khabou, Fakhri Kallabi, Rim Ben Abdelaziz, Ines Maaloul, Hajer Aloulou, Amel Ben Chehida, Thouraya Kammoun, Veronique Barbu, Tahya Sellami Boudawara, Faiza Fakhfakh, Bassem Khemakhem, Olfa Siala Sahnoun
Many inherited conditions cause hepatocellular cholestasis in infancy, including progressive familial intrahepatic cholestasis (PFIC), a heterogeneous group of diseases with highly overlapping symptoms. In our study, six unrelated Tunisian infants with PFIC suspicion were the subject of a panel-target sequencing followed by an exhaustive bioinformatic and modeling investigations. Results revealed five disease-causative variants including known ones: (the p.Asp482Gly and p.Tyr354 * in the ABCB11 gene and the p...
December 18, 2023: Annals of Human Genetics
https://read.qxmd.com/read/38018226/expression-analysis-of-nf1-mutated-alleles-in-a-rare-compound-heterozygous-spinal-nf1-patient-by-digital-pcr
#20
JOURNAL ARTICLE
Paola Bettinaglio, Viviana Tritto, Rosina Paterra, Marica Eoli, Paola Riva
BACKGROUD: Neurofibromatosis type 1 (NF1) is a heterogeneous neurocutaneous disorder. Spinal neurofibromatosis (SNF) is a distinct clinical entity of NF1, characterized by bilateral neurofibromas involving all spinal nerve roots. Although both forms are caused by intragenic heterozygous variants of NF1, missense variants have been associated with SNF, according to a dominant inheritance model causing haploinsufficiency. Most patients carry pathogenic variants in one of the NF1 alleles; nevertheless, patients with both NF1-mutated copies have been described...
November 28, 2023: Annals of Human Genetics
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